RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 Cep250Q60952 2414 aa12.5□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 Tln2Q71LX4 2375 aa12.5□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 Defa7P50705 93 aa12.5□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 Gm10192Q3V0S1 108 aa12.5□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 Q8C708 225 aa12.5□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 PerpQ9JK95 193 aa12.5□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 Rspo1Q9Z132 265 aa12.5□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 Gm29423A0A087WRM1 55 aa12.5□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 MalO09198 153 aa12.5□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 Klk1b4P00757 256 aa12.5□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 Wt1P22561 449 aa12.5□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 Trav7d-3Q5R1I1 112 aa12.5□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 Qrich2A0A140LIY9 2337 aa12.5□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 Ighv1-9A0A0A6YW37 117 aa12.5□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 P01802 115 aa12.5□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 Pom121l2Q5SW25 972 aa12.5□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 Med12lQ8BQM9 2157 aa12.5□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 Ighv1-49A0A0A6YWX2 117 aa12.5□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 Plxna4Q80UG2 1893 aa12.5□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 Gm5105Q8C6Y9 112 aa12.5□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 Pear1Q8VIK5 1034 aa12.5□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 Lyzl4Q9D925 145 aa12.5□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 Ly6c1P0CW02 131 aa12.49□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 Pcp4P63054 62 aa12.49□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 Zfp36l1P23950 338 aa12.49□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 Ube2e1P52482 193 aa12.49□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 5730522E02RikQ5SP45 163 aa12.49□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 Gm5089A1L3C8 106 aa12.49□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 Rs1Q9Z1L4 224 aa12.49□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 Atg2aQ6P4T0 1914 aa12.49□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 Gm7075D3Z497 112 aa12.49□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 Defa16P50714 93 aa12.49□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 Tomm7Q9D173 55 aa12.49□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 Dpm3Q9D1Q4 92 aa12.49□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 LitafQ9JLJ0 161 aa12.49□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 Ighv1-55A0A075B5W6 117 aa12.48□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 Gm11020F6ZGD5 61 aa12.48□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 Tmem86bQ497J1 226 aa12.48□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 Card19Q9D1I2 183 aa12.48□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 Cacna1gQ5SUF7 2381 aa12.48□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 Gm28269A0A087WSG3 125 aa12.48□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 Ighv1-62-3P01754 117 aa12.48□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 Mogat1Q91ZV4 335 aa12.48□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 Dock7Q8R1A4 2130 aaKnown RBP12.48□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 PoleQ9WVF7 2283 aa12.48□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 Gm5819E9PZ96 154 aa12.48□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 Gemin7Q9CWY4 129 aa12.48□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 Ptprz1B9EKR1 2312 aa12.48□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 Tpsab1Q02844 273 aa12.47□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 Ighv1-19A0A0A6YWX0 117 aa12.47□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 Defa-rs2P17534 91 aa12.47□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 Zic4Q61467 341 aa12.47□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 TdhQ8K3F7 373 aa12.47□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 PtprfA2A8L5 1898 aa12.47□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 Wdr81Q5ND34 1934 aa12.47□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 Trav9d-1A0A075B699 112 aa12.47□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 P01811 117 aa12.47□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 Zcwpw2Q08EN7 125 aa12.47□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 Znhit3Q9CQK1 151 aa12.47□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 Igkv20-101-2A0A0G2JDU3 113 aa12.47□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 Cacna1eQ61290 2272 aa12.46□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 B1ARW8 110 aa12.46□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 PmvkQ9D1G2 192 aa12.46□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 Fxyd7P59648 80 aa12.46□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 Msrb3Q8BU85 253 aa12.46□□□□□ -0.41
Pcdha9-201ENSMUST00000115659 Igkv4-70A0A0B4J1I5 116 aa12.46□□□□□ -0.42
Pcdha9-201ENSMUST00000115659 Trav14n-2A0A0G2JDF5 121 aa12.46□□□□□ -0.42
Pcdha9-201ENSMUST00000115659 AmelxP63277 210 aa12.46□□□□□ -0.42
Pcdha9-201ENSMUST00000115659 Gm10767Q3TQP0 103 aa12.46□□□□□ -0.42
Pcdha9-201ENSMUST00000115659 Gm2174F6ZVF2 133 aa12.46□□□□□ -0.42
Pcdha9-201ENSMUST00000115659 SbpP15501 199 aa12.46□□□□□ -0.42
Pcdha9-201ENSMUST00000115659 Sap30O88574 220 aa12.45□□□□□ -0.42
Pcdha9-201ENSMUST00000115659 CckP09240 115 aa12.45□□□□□ -0.42
Pcdha9-201ENSMUST00000115659 Ank3G5E8K5 1961 aa12.45□□□□□ -0.42
Pcdha9-201ENSMUST00000115659 Gm28778A0A087WSK7 233 aa12.45□□□□□ -0.42
Pcdha9-201ENSMUST00000115659 Ear14F6YUX7 155 aa12.45□□□□□ -0.42
Pcdha9-201ENSMUST00000115659 Znrd1Q791N7 123 aa12.45□□□□□ -0.42
Pcdha9-201ENSMUST00000115659 P01741 114 aa12.45□□□□□ -0.42
Pcdha9-201ENSMUST00000115659 Minos1Q7TNS2 76 aa12.45□□□□□ -0.42
Pcdha9-201ENSMUST00000115659 TirapQ99JY1 241 aa12.45□□□□□ -0.42
Pcdha9-201ENSMUST00000115659 Gm16381A0A1Y7VKT9 73 aa12.45□□□□□ -0.42
Pcdha9-201ENSMUST00000115659 Fhl3Q9R059 289 aa12.45□□□□□ -0.42
Pcdha9-201ENSMUST00000115659 Plxnd1Q3UH93 1925 aa12.44□□□□□ -0.42
Pcdha9-201ENSMUST00000115659 Defa26Q3L180 93 aa12.44□□□□□ -0.42
Pcdha9-201ENSMUST00000115659 Armcx4E9PWM3 2356 aa12.44□□□□□ -0.42
Pcdha9-201ENSMUST00000115659 PolP10400 120 aa12.44□□□□□ -0.42
Pcdha9-201ENSMUST00000115659 A930003A15RikQ3U552 87 aa12.44□□□□□ -0.42
Pcdha9-201ENSMUST00000115659 Slc25a48Q8BW66 306 aa12.44□□□□□ -0.42
Pcdha9-201ENSMUST00000115659 Them7Q9DCP4 223 aa12.44□□□□□ -0.42
Pcdha9-201ENSMUST00000115659 Ighv1-39A0A075B5V5 117 aa12.44□□□□□ -0.42
Pcdha9-201ENSMUST00000115659 Tal2Q62282 108 aa12.44□□□□□ -0.42
Pcdha9-201ENSMUST00000115659 Gm10775Q3V290 127 aa12.44□□□□□ -0.42
Pcdha9-201ENSMUST00000115659 Ndufa4Q62425 82 aaKnown RBP12.44□□□□□ -0.42
Pcdha9-201ENSMUST00000115659 Taf15Q8BQ46 557 aaKnown RBP12.44□□□□□ -0.42
Pcdha9-201ENSMUST00000115659 Defa28D3Z1V9 94 aa12.43□□□□□ -0.42
Pcdha9-201ENSMUST00000115659 P01792 123 aa12.43□□□□□ -0.42
Pcdha9-201ENSMUST00000115659 Gm10188Q3V432 135 aa12.43□□□□□ -0.42
Pcdha9-201ENSMUST00000115659 Defa25Q5G864 92 aa12.43□□□□□ -0.42
Pcdha9-201ENSMUST00000115659 Gtsf1Q9DAN6 167 aa12.43□□□□□ -0.42
Pcdha9-201ENSMUST00000115659 Cnot1Q6ZQ08 2375 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 79.3 ms