RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 SelenokQ9JLJ1 94 aa10.07□□□□□ -0.8
Nup88-203ENSMUST00000108531 Ighv1-20A0A0A6YX66 117 aa10.06□□□□□ -0.8
Nup88-203ENSMUST00000108531 Ighv1-77A0A0G2JGS9 117 aa10.06□□□□□ -0.8
Nup88-203ENSMUST00000108531 Esp38A8R0X1 80 aa10.06□□□□□ -0.8
Nup88-203ENSMUST00000108531 Ca1P13634 261 aa10.06□□□□□ -0.8
Nup88-203ENSMUST00000108531 Tdgf1P51865 171 aa10.06□□□□□ -0.8
Nup88-203ENSMUST00000108531 Cd52Q64389 74 aa10.06□□□□□ -0.8
Nup88-203ENSMUST00000108531 Sec11aQ9R0P6 179 aa10.06□□□□□ -0.8
Nup88-203ENSMUST00000108531 CrxO54751 299 aa10.06□□□□□ -0.8
Nup88-203ENSMUST00000108531 Gp9O88186 177 aa10.06□□□□□ -0.8
Nup88-203ENSMUST00000108531 Rchy1Q9CR50 261 aa10.06□□□□□ -0.8
Nup88-203ENSMUST00000108531 Tmem210Q9D2F0 147 aa10.06□□□□□ -0.8
Nup88-203ENSMUST00000108531 Tctex1d1Q9D5I4 173 aa10.06□□□□□ -0.8
Nup88-203ENSMUST00000108531 PdfS4R2K0 231 aa10.06□□□□□ -0.8
Nup88-203ENSMUST00000108531 Defa30E9QPZ2 93 aa10.05□□□□□ -0.8
Nup88-203ENSMUST00000108531 Vmn1r62Q8R2C0 300 aa10.05□□□□□ -0.8
Nup88-203ENSMUST00000108531 Olfr365Q8VFT2 312 aa10.05□□□□□ -0.8
Nup88-203ENSMUST00000108531 Tex48Q9DA81 110 aa10.05□□□□□ -0.8
Nup88-203ENSMUST00000108531 Npc2Q9Z0J0 149 aa10.05□□□□□ -0.8
Nup88-203ENSMUST00000108531 Gm6525A0A0A6YW33 106 aa10.05□□□□□ -0.8
Nup88-203ENSMUST00000108531 KprpB2RUR4 657 aa10.05□□□□□ -0.8
Nup88-203ENSMUST00000108531 Znf575Q3TXZ1 239 aa10.05□□□□□ -0.8
Nup88-203ENSMUST00000108531 CnfnQ6PCW6 111 aa10.05□□□□□ -0.8
Nup88-203ENSMUST00000108531 Mrpl16Q99N93 251 aa10.05□□□□□ -0.8
Nup88-203ENSMUST00000108531 Gm45521A0A1B0GRK0 198 aa10.04□□□□□ -0.8
Nup88-203ENSMUST00000108531 Itgb1bp1O35671 200 aa10.04□□□□□ -0.8
Nup88-203ENSMUST00000108531 PdpnQ62011 172 aa10.04□□□□□ -0.8
Nup88-203ENSMUST00000108531 Rnf114Q9ET26 229 aa10.04□□□□□ -0.8
Nup88-203ENSMUST00000108531 Hspb8Q9JK92 196 aa10.04□□□□□ -0.8
Nup88-203ENSMUST00000108531 A0A1Y7VMQ4 148 aa10.04□□□□□ -0.8
Nup88-203ENSMUST00000108531 NpsP0C0P8 89 aa10.04□□□□□ -0.8
Nup88-203ENSMUST00000108531 Defa6P50704 93 aa10.04□□□□□ -0.8
Nup88-203ENSMUST00000108531 Olfr1437Q7TQR7 312 aa10.04□□□□□ -0.8
Nup88-203ENSMUST00000108531 Spink6Q8BT20 105 aa10.04□□□□□ -0.8
Nup88-203ENSMUST00000108531 Gm10118Q8C8J5 116 aa10.04□□□□□ -0.8
Nup88-203ENSMUST00000108531 Klk10Q99M20 278 aa10.04□□□□□ -0.8
Nup88-203ENSMUST00000108531 Fmc1Q9CR13 113 aa10.04□□□□□ -0.8
Nup88-203ENSMUST00000108531 Omt2bD3YX29 119 aa10.03□□□□□ -0.8
Nup88-203ENSMUST00000108531 Smad7O35253 426 aa10.03□□□□□ -0.8
Nup88-203ENSMUST00000108531 Psmg4P0C7N9 123 aa10.03□□□□□ -0.8
Nup88-203ENSMUST00000108531 Srsf2Q62093 221 aaKnown RBP10.03□□□□□ -0.8
Nup88-203ENSMUST00000108531 D630044L22RikQ8C701 164 aa10.03□□□□□ -0.8
Nup88-203ENSMUST00000108531 Gtsf1lQ9CWD0 151 aa10.03□□□□□ -0.8
Nup88-203ENSMUST00000108531 Josd1Q9DBJ6 202 aa10.03□□□□□ -0.8
Nup88-203ENSMUST00000108531 Sptbn2Q68FG2 2388 aa10.03□□□□□ -0.8
Nup88-203ENSMUST00000108531 Abca1P41233 2261 aa10.03□□□□□ -0.8
Nup88-203ENSMUST00000108531 Gm5157A0A087WRH8 301 aa10.02□□□□□ -0.8
Nup88-203ENSMUST00000108531 Ighv9-1A0A0B4J1P3 117 aa10.02□□□□□ -0.8
Nup88-203ENSMUST00000108531 Gm5294J3QP53 216 aa10.02□□□□□ -0.8
Nup88-203ENSMUST00000108531 Stpg1Q9D2F5 341 aa10.02□□□□□ -0.8
Nup88-203ENSMUST00000108531 Obox8V9GWY9 217 aa10.02□□□□□ -0.8
Nup88-203ENSMUST00000108531 Tmem141A2AJB2 108 aa10.02□□□□□ -0.81
Nup88-203ENSMUST00000108531 P01756 117 aa10.02□□□□□ -0.81
Nup88-203ENSMUST00000108531 P01757 117 aa10.02□□□□□ -0.81
Nup88-203ENSMUST00000108531 Gm5150Q1AN92 299 aa10.02□□□□□ -0.81
Nup88-203ENSMUST00000108531 7420426K07RikQ3UX66 186 aa10.02□□□□□ -0.81
Nup88-203ENSMUST00000108531 Prima1Q810F0 153 aa10.02□□□□□ -0.81
Nup88-203ENSMUST00000108531 Vmn1r197Q8R265 298 aa10.02□□□□□ -0.81
Nup88-203ENSMUST00000108531 Map1lc3aQ91VR7 121 aa10.02□□□□□ -0.81
Nup88-203ENSMUST00000108531 Rnf185Q91YT2 192 aa10.02□□□□□ -0.81
Nup88-203ENSMUST00000108531 Prr23a3Q9CWP9 254 aa10.02□□□□□ -0.81
Nup88-203ENSMUST00000108531 Csmd1Q923L3 3564 aa10.02□□□□□ -0.81
Nup88-203ENSMUST00000108531 Myo15bI7HPW8 3033 aa10.02□□□□□ -0.81
Nup88-203ENSMUST00000108531 Tln1P26039 2541 aaKnown RBP10.01□□□□□ -0.81
Nup88-203ENSMUST00000108531 Igkv4-57A0A0A6YYE7 117 aa10.01□□□□□ -0.81
Nup88-203ENSMUST00000108531 P01725 110 aa10.01□□□□□ -0.81
Nup88-203ENSMUST00000108531 H2-DMb1P35737 261 aa10.01□□□□□ -0.81
Nup88-203ENSMUST00000108531 Prrx2Q06348 247 aa10.01□□□□□ -0.81
Nup88-203ENSMUST00000108531 Gm4763Q8CFJ5 196 aa10.01□□□□□ -0.81
Nup88-203ENSMUST00000108531 PpdpfQ9CR37 115 aa10.01□□□□□ -0.81
Nup88-203ENSMUST00000108531 Q9D131 166 aa10.01□□□□□ -0.81
Nup88-203ENSMUST00000108531 Vmn1r63Q9EPT1 300 aa10.01□□□□□ -0.81
Nup88-203ENSMUST00000108531 Emp2O88662 172 aa10.01□□□□□ -0.81
Nup88-203ENSMUST00000108531 Vsig8Q6P3A4 417 aa10.01□□□□□ -0.81
Nup88-203ENSMUST00000108531 Trpt1Q8K3A2 249 aa10.01□□□□□ -0.81
Nup88-203ENSMUST00000108531 Hoxc12Q8K5B8 280 aa10.01□□□□□ -0.81
Nup88-203ENSMUST00000108531 Ndufc2Q9CQ54 120 aa10.01□□□□□ -0.81
Nup88-203ENSMUST00000108531 Pla2g2dQ9WVF6 144 aa10.01□□□□□ -0.81
Nup88-203ENSMUST00000108531 Fbn2Q61555 2907 aa10.01□□□□□ -0.81
Nup88-203ENSMUST00000108531 Tcrg-V6A0A075B5Y8 134 aa10□□□□□ -0.81
Nup88-203ENSMUST00000108531 CrygbP04344 175 aa10□□□□□ -0.81
Nup88-203ENSMUST00000108531 Parm1Q923D3 296 aa10□□□□□ -0.81
Nup88-203ENSMUST00000108531 Igkv4-90A0A075B5L3 117 aa10□□□□□ -0.81
Nup88-203ENSMUST00000108531 Trav14-2A0A075B694 121 aa10□□□□□ -0.81
Nup88-203ENSMUST00000108531 Ccl6P27784 116 aa10□□□□□ -0.81
Nup88-203ENSMUST00000108531 SstP60041 116 aa10□□□□□ -0.81
Nup88-203ENSMUST00000108531 Prok1Q14A28 105 aa10□□□□□ -0.81
Nup88-203ENSMUST00000108531 Zfand3Q497H0 227 aa10□□□□□ -0.81
Nup88-203ENSMUST00000108531 Gm5941Q497P9 117 aa10□□□□□ -0.81
Nup88-203ENSMUST00000108531 G0s2Q61585 103 aa10□□□□□ -0.81
Nup88-203ENSMUST00000108531 MycbQ6P8Z1 170 aa10□□□□□ -0.81
Nup88-203ENSMUST00000108531 Aqp6Q8C4A0 293 aa10□□□□□ -0.81
Nup88-203ENSMUST00000108531 Ighv3-1A0A075B5S6 116 aa9.99□□□□□ -0.81
Nup88-203ENSMUST00000108531 Ighv6-7A0A0A6YWU3 119 aa9.99□□□□□ -0.81
Nup88-203ENSMUST00000108531 Ighv8-8A0A0A6YXQ0 119 aa9.99□□□□□ -0.81
Nup88-203ENSMUST00000108531 BC107364E9Q5A2 140 aa9.99□□□□□ -0.81
Nup88-203ENSMUST00000108531 AW146154Q3TPQ7 468 aa9.99□□□□□ -0.81
Nup88-203ENSMUST00000108531 Gm10604Q3V0X7 143 aa9.99□□□□□ -0.81
Nup88-203ENSMUST00000108531 Slc35d2Q762D5 326 aa9.99□□□□□ -0.81
Nup88-203ENSMUST00000108531 Minos1Q7TNS2 76 aa9.99□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 131.3 ms