RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 ST20-AS1Q8NBB2 130 aa6□□□□□ -1.45
PHGDH-215ENST00000641371 XGP55808 180 aa5.99□□□□□ -1.45
PHGDH-215ENST00000641371 C1orf137Q5JT78 98 aa5.99□□□□□ -1.45
PHGDH-215ENST00000641371 KRTAP11-1Q8IUC1 163 aa5.99□□□□□ -1.45
PHGDH-215ENST00000641371 TRBV7-7A0A0K0K1E9 115 aa5.98□□□□□ -1.45
PHGDH-215ENST00000641371 A0A1B0GV72 72 aa5.98□□□□□ -1.45
PHGDH-215ENST00000641371 CIRBP-AS1Q8TBR5 109 aa5.98□□□□□ -1.45
PHGDH-215ENST00000641371 LINC00846Q9NV44 126 aa5.98□□□□□ -1.45
PHGDH-215ENST00000641371 BIRC6Q9NR09 4857 aa5.98□□□□□ -1.45
PHGDH-215ENST00000641371 IGLV7-43P04211 117 aa5.97□□□□□ -1.45
PHGDH-215ENST00000641371 KRTAP10-1P60331 282 aa5.97□□□□□ -1.45
PHGDH-215ENST00000641371 LINC00483Q53H64 154 aa5.97□□□□□ -1.45
PHGDH-215ENST00000641371 SCXQ7RTU7 201 aa5.97□□□□□ -1.45
PHGDH-215ENST00000641371 SMIM29Q86T20 159 aa5.97□□□□□ -1.45
PHGDH-215ENST00000641371 Q8NBF4 154 aa5.97□□□□□ -1.45
PHGDH-215ENST00000641371 HYDINQ4G0P3 5121 aa5.96□□□□□ -1.45
PHGDH-215ENST00000641371 MT-ATP8P03928 68 aa5.96□□□□□ -1.46
PHGDH-215ENST00000641371 SPRR4Q96PI1 79 aa5.96□□□□□ -1.46
PHGDH-215ENST00000641371 EPPK1P58107 5090 aaKnown RBP5.96□□□□□ -1.46
PHGDH-215ENST00000641371 PKD1P98161 4303 aa5.95□□□□□ -1.46
PHGDH-215ENST00000641371 CXCL6P80162 114 aa5.94□□□□□ -1.46
PHGDH-215ENST00000641371 FAM30AQ9NZY2 134 aa5.94□□□□□ -1.46
PHGDH-215ENST00000641371 CRYGAP11844 174 aa5.93□□□□□ -1.46
PHGDH-215ENST00000641371 C3orf22Q8N5N4 141 aa5.93□□□□□ -1.46
PHGDH-215ENST00000641371 A0A1B0GVY2 172 aa5.92□□□□□ -1.46
PHGDH-215ENST00000641371 NREPQ16612 68 aa5.92□□□□□ -1.46
PHGDH-215ENST00000641371 Q6ZVQ6 151 aa5.92□□□□□ -1.46
PHGDH-215ENST00000641371 IGFL1Q6UW32 110 aa5.91□□□□□ -1.46
PHGDH-215ENST00000641371 A0A1W2PNM2 257 aa5.9□□□□□ -1.46
PHGDH-215ENST00000641371 FAM229BQ4G0N7 80 aa5.89□□□□□ -1.47
PHGDH-215ENST00000641371 RYR2Q92736 4967 aa5.88□□□□□ -1.47
PHGDH-215ENST00000641371 HAMPP81172 84 aa5.88□□□□□ -1.47
PHGDH-215ENST00000641371 C9orf153Q5TBE3 101 aa5.88□□□□□ -1.47
PHGDH-215ENST00000641371 SS18L2Q9UHA2 77 aa5.88□□□□□ -1.47
PHGDH-215ENST00000641371 SSBP3-AS1Q7Z2R9 100 aa5.87□□□□□ -1.47
PHGDH-215ENST00000641371 IGKV3D-7A0A0C4DH55 119 aa5.86□□□□□ -1.47
PHGDH-215ENST00000641371 BPY2O14599 106 aa5.86□□□□□ -1.47
PHGDH-215ENST00000641371 LRP1BQ9NZR2 4599 aa5.86□□□□□ -1.47
PHGDH-215ENST00000641371 CD164Q04900 197 aa5.85□□□□□ -1.47
PHGDH-215ENST00000641371 DYNC1H1Q14204 4646 aaKnown RBP5.84□□□□□ -1.47
PHGDH-215ENST00000641371 IGLV9-49A0A0B4J1Y8 123 aa5.84□□□□□ -1.47
PHGDH-215ENST00000641371 PCP4P48539 62 aa5.84□□□□□ -1.47
PHGDH-215ENST00000641371 SPINK6Q6UWN8 80 aa5.84□□□□□ -1.47
PHGDH-215ENST00000641371 A0A087WSZ3 146 aa5.83□□□□□ -1.48
PHGDH-215ENST00000641371 J3KT08 172 aa5.83□□□□□ -1.48
PHGDH-215ENST00000641371 ATOX1O00244 68 aa5.83□□□□□ -1.48
PHGDH-215ENST00000641371 HIST1H4AP62805 103 aaKnown RBP5.83□□□□□ -1.48
PHGDH-215ENST00000641371 FAM236AA0A1B0GUQ0 79 aa5.82□□□□□ -1.48
PHGDH-215ENST00000641371 FAM236BA0A1B0GV22 79 aa5.82□□□□□ -1.48
PHGDH-215ENST00000641371 MOBPQ13875 183 aa5.82□□□□□ -1.48
PHGDH-215ENST00000641371 PKHD1P08F94 4074 aa5.82□□□□□ -1.48
PHGDH-215ENST00000641371 SMIM20Q8N5G0 67 aa5.81□□□□□ -1.48
PHGDH-215ENST00000641371 ANAPC13Q9BS18 74 aa5.8□□□□□ -1.48
PHGDH-215ENST00000641371 VPS13BQ7Z7G8 4022 aa5.79□□□□□ -1.48
PHGDH-215ENST00000641371 CDK2AP2O75956 126 aa5.78□□□□□ -1.48
PHGDH-215ENST00000641371 PLA2G1BP04054 148 aaKnown RBP5.78□□□□□ -1.48
PHGDH-215ENST00000641371 APOBP04114 4563 aaKnown RBP5.76□□□□□ -1.49
PHGDH-215ENST00000641371 FAM229AH3BQW9 127 aa5.76□□□□□ -1.49
PHGDH-215ENST00000641371 NDUFB1O75438 58 aa5.76□□□□□ -1.49
PHGDH-215ENST00000641371 ASB16-AS1Q495Z4 193 aa5.76□□□□□ -1.49
PHGDH-215ENST00000641371 Q5XG85 94 aa5.76□□□□□ -1.49
PHGDH-215ENST00000641371 LINC00472Q9H8W2 130 aa5.76□□□□□ -1.49
PHGDH-215ENST00000641371 SRRM2Q9UQ35 2752 aaKnown RBP5.75□□□□□ -1.49
PHGDH-215ENST00000641371 IGKV4-1P06312 121 aa5.75□□□□□ -1.49
PHGDH-215ENST00000641371 KRTAP1-4P0C5Y4 121 aa5.75□□□□□ -1.49
PHGDH-215ENST00000641371 LIMD2Q9BT23 127 aa5.75□□□□□ -1.49
PHGDH-215ENST00000641371 A0A087WVE0 104 aa5.74□□□□□ -1.49
PHGDH-215ENST00000641371 A0A0G2JQZ4 141 aa5.74□□□□□ -1.49
PHGDH-215ENST00000641371 A8MWP4 228 aa5.74□□□□□ -1.49
PHGDH-215ENST00000641371 C4orf48Q5BLP8 95 aa5.74□□□□□ -1.49
PHGDH-215ENST00000641371 SPAG11AQ6PDA7 123 aa5.74□□□□□ -1.49
PHGDH-215ENST00000641371 ANAPC11Q9NYG5 84 aa5.74□□□□□ -1.49
PHGDH-215ENST00000641371 DSCR10P59022 87 aa5.73□□□□□ -1.49
PHGDH-215ENST00000641371 RPS29P62273 56 aaKnown RBP5.73□□□□□ -1.49
PHGDH-215ENST00000641371 SERP2Q8N6R1 65 aa5.72□□□□□ -1.49
PHGDH-215ENST00000641371 TYMSOSQ8TAI1 123 aa5.72□□□□□ -1.49
PHGDH-215ENST00000641371 A0A087X002 238 aa5.71□□□□□ -1.5
PHGDH-215ENST00000641371 UQCRQO14949 82 aa5.71□□□□□ -1.5
PHGDH-215ENST00000641371 SPINK1P00995 79 aa5.71□□□□□ -1.5
PHGDH-215ENST00000641371 SMR3BP02814 79 aaPredicted RBP5.71□□□□□ -1.5
PHGDH-215ENST00000641371 KRTAP13-2Q52LG2 175 aa5.71□□□□□ -1.5
PHGDH-215ENST00000641371 PRR15Q8IV56 129 aa5.71□□□□□ -1.5
PHGDH-215ENST00000641371 TRAV7A0A075B6U4 112 aa5.7□□□□□ -1.5
PHGDH-215ENST00000641371 HCG22E2RYF7 251 aa5.7□□□□□ -1.5
PHGDH-215ENST00000641371 K7EQZ3 153 aa5.7□□□□□ -1.5
PHGDH-215ENST00000641371 COX7CP15954 63 aa5.7□□□□□ -1.5
PHGDH-215ENST00000641371 HRCT1Q6UXD1 115 aa5.7□□□□□ -1.5
PHGDH-215ENST00000641371 HERC2O95714 4834 aa5.69□□□□□ -1.5
PHGDH-215ENST00000641371 PCLOQ9Y6V0 5065 aa5.68□□□□□ -1.5
PHGDH-215ENST00000641371 KRTAP10-4P60372 401 aaPredicted RBP5.68□□□□□ -1.5
PHGDH-215ENST00000641371 Q8N9L7 120 aa5.68□□□□□ -1.5
PHGDH-215ENST00000641371 Q96NJ1 140 aa5.68□□□□□ -1.5
PHGDH-215ENST00000641371 PKHD1L1Q86WI1 4243 aa5.68□□□□□ -1.5
PHGDH-215ENST00000641371 C8orf87E5RJ46 101 aa5.66□□□□□ -1.5
PHGDH-215ENST00000641371 LINC00304Q8N9R0 145 aa5.66□□□□□ -1.5
PHGDH-215ENST00000641371 RYR1P21817 5038 aa5.66□□□□□ -1.5
PHGDH-215ENST00000641371 A0A1B0GVX0 72 aa5.65□□□□□ -1.5
PHGDH-215ENST00000641371 DEFB116Q30KQ4 102 aa5.65□□□□□ -1.5
PHGDH-215ENST00000641371 CASC2Q6XLA1 102 aa5.64□□□□□ -1.51
PHGDH-215ENST00000641371 FAT1Q14517 4588 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms