RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 ZNF706Q9Y5V0 76 aaPredicted RBP7.15□□□□□ -1.26
CLN6-223ENST00000637823 SMR3BP02814 79 aaPredicted RBP7.14□□□□□ -1.27
CLN6-223ENST00000637823 GAGE2AQ6NT46 116 aa7.13□□□□□ -1.27
CLN6-223ENST00000637823 SPRR4Q96PI1 79 aa7.13□□□□□ -1.27
CLN6-223ENST00000637823 HERC2O95714 4834 aa7.12□□□□□ -1.27
CLN6-223ENST00000637823 RBM3P98179 157 aaKnown RBP7.12□□□□□ -1.27
CLN6-223ENST00000637823 LINC00483Q53H64 154 aa7.11□□□□□ -1.27
CLN6-223ENST00000637823 SMIM29Q86T20 159 aa7.11□□□□□ -1.27
CLN6-223ENST00000637823 C3orf22Q8N5N4 141 aa7.1□□□□□ -1.27
CLN6-223ENST00000637823 A0A1B0GV72 72 aa7.09□□□□□ -1.27
CLN6-223ENST00000637823 F8WEM9 126 aa7.09□□□□□ -1.27
CLN6-223ENST00000637823 J3QR89 54 aa7.09□□□□□ -1.27
CLN6-223ENST00000637823 DSCR8Q96T75 97 aa7.09□□□□□ -1.27
CLN6-223ENST00000637823 C14orf132Q9NPU4 83 aa7.09□□□□□ -1.27
CLN6-223ENST00000637823 APOBP04114 4563 aaKnown RBP7.09□□□□□ -1.27
CLN6-223ENST00000637823 PDE6GP18545 87 aa7.08□□□□□ -1.28
CLN6-223ENST00000637823 SPINK6Q6UWN8 80 aa7.08□□□□□ -1.28
CLN6-223ENST00000637823 VPS13BQ7Z7G8 4022 aa7.07□□□□□ -1.28
CLN6-223ENST00000637823 IGLV8-61A0A075B6I0 122 aa7.07□□□□□ -1.28
CLN6-223ENST00000637823 LOC110117498A0A087WWA1 95 aa7.07□□□□□ -1.28
CLN6-223ENST00000637823 FAM229AH3BQW9 127 aa7.07□□□□□ -1.28
CLN6-223ENST00000637823 K7ERU9 68 aa7.07□□□□□ -1.28
CLN6-223ENST00000637823 TRBV7-4A0A0J9YYF1 115 aa7.06□□□□□ -1.28
CLN6-223ENST00000637823 PLA2G1BP04054 148 aaKnown RBP7.06□□□□□ -1.28
CLN6-223ENST00000637823 KRTAP10-4P60372 401 aaPredicted RBP7.06□□□□□ -1.28
CLN6-223ENST00000637823 C21orf62-AS1Q17RA5 79 aa7.06□□□□□ -1.28
CLN6-223ENST00000637823 CCKP06307 115 aa7.05□□□□□ -1.28
CLN6-223ENST00000637823 Q6ZQT0 140 aa7.05□□□□□ -1.28
CLN6-223ENST00000637823 FAM229BQ4G0N7 80 aa7.03□□□□□ -1.28
CLN6-223ENST00000637823 Q6JHZ5 121 aa7.03□□□□□ -1.28
CLN6-223ENST00000637823 ANAPC11Q9NYG5 84 aa7.03□□□□□ -1.28
CLN6-223ENST00000637823 IGLV9-49A0A0B4J1Y8 123 aa7.01□□□□□ -1.29
CLN6-223ENST00000637823 FAM240AA0A1B0GVK7 77 aa7.01□□□□□ -1.29
CLN6-223ENST00000637823 ACYP1P07311 99 aa7.01□□□□□ -1.29
CLN6-223ENST00000637823 KRTAP1-4P0C5Y4 121 aa7□□□□□ -1.29
CLN6-223ENST00000637823 C9orf153Q5TBE3 101 aa7□□□□□ -1.29
CLN6-223ENST00000637823 Q5VSD8 79 aa7□□□□□ -1.29
CLN6-223ENST00000637823 IGFL1Q6UW32 110 aa7□□□□□ -1.29
CLN6-223ENST00000637823 Q8NBF4 154 aa6.99□□□□□ -1.29
CLN6-223ENST00000637823 A0A1B0GW54 56 aa6.98□□□□□ -1.29
CLN6-223ENST00000637823 A0A1W2PNM2 257 aa6.98□□□□□ -1.29
CLN6-223ENST00000637823 CRYGAP11844 174 aa6.98□□□□□ -1.29
CLN6-223ENST00000637823 MOBPQ13875 183 aa6.98□□□□□ -1.29
CLN6-223ENST00000637823 SSBP3-AS1Q7Z2R9 100 aa6.98□□□□□ -1.29
CLN6-223ENST00000637823 VPS25Q9BRG1 176 aa6.98□□□□□ -1.29
CLN6-223ENST00000637823 Q8N1X5 172 aa6.97□□□□□ -1.29
CLN6-223ENST00000637823 PKHD1L1Q86WI1 4243 aa6.97□□□□□ -1.29
CLN6-223ENST00000637823 HSPG2P98160 4391 aa6.97□□□□□ -1.29
CLN6-223ENST00000637823 A0A0G2JQZ4 141 aa6.96□□□□□ -1.3
CLN6-223ENST00000637823 Q6Q795 121 aa6.96□□□□□ -1.3
CLN6-223ENST00000637823 A0A087X002 238 aa6.95□□□□□ -1.3
CLN6-223ENST00000637823 KRTAP13-2Q52LG2 175 aa6.95□□□□□ -1.3
CLN6-223ENST00000637823 FAT1Q14517 4588 aa6.93□□□□□ -1.3
CLN6-223ENST00000637823 LINC00846Q9NV44 126 aa6.93□□□□□ -1.3
CLN6-223ENST00000637823 CDIP1Q9H305 208 aa6.92□□□□□ -1.3
CLN6-223ENST00000637823 CD164Q04900 197 aa6.91□□□□□ -1.3
CLN6-223ENST00000637823 TYMSOSQ8TAI1 123 aa6.91□□□□□ -1.3
CLN6-223ENST00000637823 UBL5Q9BZL1 73 aa6.9□□□□□ -1.3
CLN6-223ENST00000637823 TRBV7-7A0A0K0K1E9 115 aa6.89□□□□□ -1.31
CLN6-223ENST00000637823 PRR26Q8N8Z3 221 aa6.89□□□□□ -1.31
CLN6-223ENST00000637823 NREPQ16612 68 aa6.88□□□□□ -1.31
CLN6-223ENST00000637823 KIAA1109Q2LD37 5005 aa6.88□□□□□ -1.31
CLN6-223ENST00000637823 A0A087WSZ3 146 aa6.87□□□□□ -1.31
CLN6-223ENST00000637823 HRCT1Q6UXD1 115 aa6.87□□□□□ -1.31
CLN6-223ENST00000637823 Q6ZVQ6 151 aa6.87□□□□□ -1.31
CLN6-223ENST00000637823 LINC00643Q86TS7 51 aa6.87□□□□□ -1.31
CLN6-223ENST00000637823 SS18L2Q9UHA2 77 aa6.84□□□□□ -1.31
CLN6-223ENST00000637823 SPAG11AQ6PDA7 123 aa6.83□□□□□ -1.32
CLN6-223ENST00000637823 SPINK1P00995 79 aa6.82□□□□□ -1.32
CLN6-223ENST00000637823 LINC00304Q8N9R0 145 aa6.82□□□□□ -1.32
CLN6-223ENST00000637823 KRTAP10-8P60410 259 aa6.81□□□□□ -1.32
CLN6-223ENST00000637823 ATP5EP2Q5VTU8 51 aa6.81□□□□□ -1.32
CLN6-223ENST00000637823 Q5XG85 94 aa6.81□□□□□ -1.32
CLN6-223ENST00000637823 SIGMAR1Q99720 223 aa6.81□□□□□ -1.32
CLN6-223ENST00000637823 ABCA13Q86UQ4 5058 aa6.8□□□□□ -1.32
CLN6-223ENST00000637823 CXCL6P80162 114 aa6.8□□□□□ -1.32
CLN6-223ENST00000637823 ASB16-AS1Q495Z4 193 aa6.8□□□□□ -1.32
CLN6-223ENST00000637823 LINC00472Q9H8W2 130 aa6.8□□□□□ -1.32
CLN6-223ENST00000637823 BPY2O14599 106 aa6.79□□□□□ -1.32
CLN6-223ENST00000637823 MT-ATP8P03928 68 aa6.79□□□□□ -1.32
CLN6-223ENST00000637823 RPS29P62273 56 aaKnown RBP6.79□□□□□ -1.32
CLN6-223ENST00000637823 LIMD2Q9BT23 127 aa6.79□□□□□ -1.32
CLN6-223ENST00000637823 IGKV3D-7A0A0C4DH55 119 aa6.78□□□□□ -1.32
CLN6-223ENST00000637823 KRTAP4-5Q9BYR2 181 aa6.78□□□□□ -1.32
CLN6-223ENST00000637823 OXTP01178 125 aa6.77□□□□□ -1.33
CLN6-223ENST00000637823 FLG2Q5D862 2391 aaPredicted RBP6.77□□□□□ -1.33
CLN6-223ENST00000637823 J3KT08 172 aa6.76□□□□□ -1.33
CLN6-223ENST00000637823 Q96NJ1 140 aa6.76□□□□□ -1.33
CLN6-223ENST00000637823 IMUPQ9GZP8 106 aa6.76□□□□□ -1.33
CLN6-223ENST00000637823 DEFB116Q30KQ4 102 aa6.75□□□□□ -1.33
CLN6-223ENST00000637823 IGKV4-1P06312 121 aa6.73□□□□□ -1.33
CLN6-223ENST00000637823 DSCR10P59022 87 aa6.73□□□□□ -1.33
CLN6-223ENST00000637823 C1orf195Q5TG92 126 aa6.72□□□□□ -1.33
CLN6-223ENST00000637823 MT1HL1P0DM35 61 aa6.71□□□□□ -1.34
CLN6-223ENST00000637823 HIST1H4AP62805 103 aaKnown RBP6.71□□□□□ -1.34
CLN6-223ENST00000637823 FAT3Q8TDW7 4589 aa6.7□□□□□ -1.34
CLN6-223ENST00000637823 A8MWP4 228 aa6.7□□□□□ -1.34
CLN6-223ENST00000637823 KRTAP29-1A8MX34 341 aaPredicted RBP6.7□□□□□ -1.34
CLN6-223ENST00000637823 NDUFB1O75438 58 aa6.69□□□□□ -1.34
CLN6-223ENST00000637823 UBR4Q5T4S7 5183 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms