RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 SMCPP49901 116 aaPredicted RBP13.42□□□□□ -0.26
CBWD3-213ENST00000618217 DNAL4O96015 105 aa13.41□□□□□ -0.26
CBWD3-213ENST00000618217 CRYGAP11844 174 aa13.41□□□□□ -0.26
CBWD3-213ENST00000618217 SPRR1BP22528 89 aa13.41□□□□□ -0.26
CBWD3-213ENST00000618217 LINC01547P58512 204 aaPredicted RBP13.4□□□□□ -0.26
CBWD3-213ENST00000618217 KRTAP13-2Q52LG2 175 aa13.4□□□□□ -0.26
CBWD3-213ENST00000618217 IGLV5-48A0A075B6I7 105 aa13.39□□□□□ -0.27
CBWD3-213ENST00000618217 A0A1B0GX51 115 aa13.38□□□□□ -0.27
CBWD3-213ENST00000618217 Q6ZQY7 126 aa13.37□□□□□ -0.27
CBWD3-213ENST00000618217 ANKRD29Q8N6D5 301 aa13.37□□□□□ -0.27
CBWD3-213ENST00000618217 H3BT86 120 aa13.36□□□□□ -0.27
CBWD3-213ENST00000618217 TNXBP22105 4242 aa13.36□□□□□ -0.27
CBWD3-213ENST00000618217 SNCGO76070 127 aa13.35□□□□□ -0.27
CBWD3-213ENST00000618217 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.35□□□□□ -0.27
CBWD3-213ENST00000618217 DEFB105AQ8NG35 78 aa13.35□□□□□ -0.27
CBWD3-213ENST00000618217 DMBT1Q9UGM3 2413 aaPredicted RBP13.35□□□□□ -0.27
CBWD3-213ENST00000618217 TEX49A0A1B0GTD5 131 aa13.35□□□□□ -0.27
CBWD3-213ENST00000618217 Q8N377 158 aa13.35□□□□□ -0.27
CBWD3-213ENST00000618217 J3QL48 77 aa13.34□□□□□ -0.27
CBWD3-213ENST00000618217 ETDBQ3ZM63 59 aa13.34□□□□□ -0.27
CBWD3-213ENST00000618217 C3orf22Q8N5N4 141 aa13.33□□□□□ -0.28
CBWD3-213ENST00000618217 BAALC-AS2P0C853 105 aa13.31□□□□□ -0.28
CBWD3-213ENST00000618217 SMIM29Q86T20 159 aa13.31□□□□□ -0.28
CBWD3-213ENST00000618217 TYMSOSQ8TAI1 123 aa13.3□□□□□ -0.28
CBWD3-213ENST00000618217 ORMDL1Q9P0S3 153 aa13.3□□□□□ -0.28
CBWD3-213ENST00000618217 TEN1Q86WV5 123 aa13.28□□□□□ -0.28
CBWD3-213ENST00000618217 IGLV9-49A0A0B4J1Y8 123 aa13.26□□□□□ -0.29
CBWD3-213ENST00000618217 OCIAD2Q56VL3 154 aa13.26□□□□□ -0.29
CBWD3-213ENST00000618217 PPDPFLQ8WWR9 84 aa13.25□□□□□ -0.29
CBWD3-213ENST00000618217 LAMTOR3Q9UHA4 124 aa13.25□□□□□ -0.29
CBWD3-213ENST00000618217 MOBPQ13875 183 aa13.24□□□□□ -0.29
CBWD3-213ENST00000618217 SSBP3-AS1Q7Z2R9 100 aa13.21□□□□□ -0.3
CBWD3-213ENST00000618217 Q8NBF4 154 aa13.19□□□□□ -0.3
CBWD3-213ENST00000618217 TMEM256-PLSCR3K7ERE1 68 aa13.18□□□□□ -0.3
CBWD3-213ENST00000618217 C9orf153Q5TBE3 101 aa13.18□□□□□ -0.3
CBWD3-213ENST00000618217 GHRHP01286 108 aa13.16□□□□□ -0.3
CBWD3-213ENST00000618217 LINC00304Q8N9R0 145 aa13.15□□□□□ -0.3
CBWD3-213ENST00000618217 H3BQ85 93 aa13.14□□□□□ -0.31
CBWD3-213ENST00000618217 K7ERU9 68 aa13.14□□□□□ -0.31
CBWD3-213ENST00000618217 IGLV8-61A0A075B6I0 122 aa13.13□□□□□ -0.31
CBWD3-213ENST00000618217 A0A1B0GV72 72 aa13.11□□□□□ -0.31
CBWD3-213ENST00000618217 J3QR89 54 aa13.11□□□□□ -0.31
CBWD3-213ENST00000618217 NDUFV3P56181 108 aaKnown RBP13.11□□□□□ -0.31
CBWD3-213ENST00000618217 F8WEM9 126 aa13.1□□□□□ -0.31
CBWD3-213ENST00000618217 SPAG11AQ6PDA7 123 aa13.09□□□□□ -0.31
CBWD3-213ENST00000618217 HERC1Q15751 4861 aa13.08□□□□□ -0.32
CBWD3-213ENST00000618217 A0A0G2JQZ4 141 aa13.07□□□□□ -0.32
CBWD3-213ENST00000618217 OBSCN-AS1Q96MR7 158 aa13.06□□□□□ -0.32
CBWD3-213ENST00000618217 JMJD7-PLA2G4BH0Y9G9 81 aa13.06□□□□□ -0.32
CBWD3-213ENST00000618217 C4orf48Q5BLP8 95 aa13.05□□□□□ -0.32
CBWD3-213ENST00000618217 SPINK1P00995 79 aa13.04□□□□□ -0.32
CBWD3-213ENST00000618217 Q6JHZ5 121 aa13.04□□□□□ -0.32
CBWD3-213ENST00000618217 C14orf132Q9NPU4 83 aa13.04□□□□□ -0.32
CBWD3-213ENST00000618217 IGFL1Q6UW32 110 aa13.03□□□□□ -0.32
CBWD3-213ENST00000618217 CD164Q04900 197 aa13.01□□□□□ -0.33
CBWD3-213ENST00000618217 RBM3P98179 157 aaKnown RBP12.99□□□□□ -0.33
CBWD3-213ENST00000618217 RPS29P62273 56 aaKnown RBP12.99□□□□□ -0.33
CBWD3-213ENST00000618217 HRCT1Q6UXD1 115 aa12.97□□□□□ -0.33
CBWD3-213ENST00000618217 DSCR8Q96T75 97 aa12.94□□□□□ -0.34
CBWD3-213ENST00000618217 LOC110117498A0A087WWA1 95 aa12.9□□□□□ -0.34
CBWD3-213ENST00000618217 VPS25Q9BRG1 176 aa12.9□□□□□ -0.34
CBWD3-213ENST00000618217 TRBV7-4A0A0J9YYF1 115 aa12.89□□□□□ -0.35
CBWD3-213ENST00000618217 FAM240AA0A1B0GVK7 77 aa12.89□□□□□ -0.35
CBWD3-213ENST00000618217 CCKP06307 115 aa12.89□□□□□ -0.35
CBWD3-213ENST00000618217 Q6Q795 121 aa12.89□□□□□ -0.35
CBWD3-213ENST00000618217 Q6ZQT0 140 aa12.89□□□□□ -0.35
CBWD3-213ENST00000618217 Q5XG85 94 aa12.88□□□□□ -0.35
CBWD3-213ENST00000618217 TRBV7-7A0A0K0K1E9 115 aa12.87□□□□□ -0.35
CBWD3-213ENST00000618217 A0A1W2PNM2 257 aa12.87□□□□□ -0.35
CBWD3-213ENST00000618217 PDE6GP18545 87 aa12.87□□□□□ -0.35
CBWD3-213ENST00000618217 RETNLBQ9BQ08 111 aa12.86□□□□□ -0.35
CBWD3-213ENST00000618217 ACYP1P07311 99 aa12.85□□□□□ -0.35
CBWD3-213ENST00000618217 LIMD2Q9BT23 127 aa12.85□□□□□ -0.35
CBWD3-213ENST00000618217 CDIP1Q9H305 208 aa12.83□□□□□ -0.36
CBWD3-213ENST00000618217 C21orf62-AS1Q17RA5 79 aa12.78□□□□□ -0.36
CBWD3-213ENST00000618217 PRR4Q16378 134 aa12.77□□□□□ -0.36
CBWD3-213ENST00000618217 HMCN2Q8NDA2 5059 aa12.77□□□□□ -0.36
CBWD3-213ENST00000618217 ASB16-AS1Q495Z4 193 aa12.77□□□□□ -0.37
CBWD3-213ENST00000618217 LINC00846Q9NV44 126 aa12.76□□□□□ -0.37
CBWD3-213ENST00000618217 A0A087WSZ3 146 aa12.74□□□□□ -0.37
CBWD3-213ENST00000618217 C1orf195Q5TG92 126 aa12.74□□□□□ -0.37
CBWD3-213ENST00000618217 FP248Q71RG6 208 aaPredicted RBP12.74□□□□□ -0.37
CBWD3-213ENST00000618217 IGLV7-46A0A075B6I9 117 aa12.7□□□□□ -0.38
CBWD3-213ENST00000618217 SS18L2Q9UHA2 77 aa12.7□□□□□ -0.38
CBWD3-213ENST00000618217 UBL5Q9BZL1 73 aa12.66□□□□□ -0.38
CBWD3-213ENST00000618217 MT-ATP8P03928 68 aa12.65□□□□□ -0.38
CBWD3-213ENST00000618217 LINC00643Q86TS7 51 aa12.65□□□□□ -0.38
CBWD3-213ENST00000618217 SIGMAR1Q99720 223 aa12.65□□□□□ -0.38
CBWD3-213ENST00000618217 A0A1B0GW54 56 aa12.63□□□□□ -0.39
CBWD3-213ENST00000618217 Q96NJ1 140 aa12.63□□□□□ -0.39
CBWD3-213ENST00000618217 Q6ZVQ6 151 aa12.61□□□□□ -0.39
CBWD3-213ENST00000618217 TPRXLQ17RH7 258 aa12.6□□□□□ -0.39
CBWD3-213ENST00000618217 KRTAP13-3Q3SY46 172 aa12.58□□□□□ -0.4
CBWD3-213ENST00000618217 LINC00472Q9H8W2 130 aa12.58□□□□□ -0.4
CBWD3-213ENST00000618217 LPAP08519 4548 aa12.58□□□□□ -0.4
CBWD3-213ENST00000618217 IGKV3D-7A0A0C4DH55 119 aa12.55□□□□□ -0.4
CBWD3-213ENST00000618217 NREPQ16612 68 aa12.55□□□□□ -0.4
CBWD3-213ENST00000618217 LRP2P98164 4655 aa12.54□□□□□ -0.4
CBWD3-213ENST00000618217 ATP5EP2Q5VTU8 51 aa12.51□□□□□ -0.41
CBWD3-213ENST00000618217 DEFB116Q30KQ4 102 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms