RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 KRTAP26-1Q6PEX3 210 aa2.75□□□□□ -1.97
CHD9-221ENST00000615216 M0R2T5 61 aa2.75□□□□□ -1.97
CHD9-221ENST00000615216 ROMO1P60602 79 aa2.75□□□□□ -1.97
CHD9-221ENST00000615216 A0A0A0MQY5 61 aa2.74□□□□□ -1.97
CHD9-221ENST00000615216 CYSTM1Q9H1C7 97 aa2.74□□□□□ -1.97
CHD9-221ENST00000615216 SPINK7P58062 85 aa2.74□□□□□ -1.97
CHD9-221ENST00000615216 SRCAPQ6ZRS2 3230 aa2.74□□□□□ -1.97
CHD9-221ENST00000615216 CENPEQ02224 2701 aa2.74□□□□□ -1.97
CHD9-221ENST00000615216 H1FX-AS1Q4G0G2 97 aa2.74□□□□□ -1.97
CHD9-221ENST00000615216 NBEAL1Q6ZS30 2694 aa2.74□□□□□ -1.97
CHD9-221ENST00000615216 GCN1Q92616 2671 aaKnown RBP2.73□□□□□ -1.97
CHD9-221ENST00000615216 R4GN34 69 aa2.73□□□□□ -1.97
CHD9-221ENST00000615216 FLNBO75369 2602 aaKnown RBP2.73□□□□□ -1.97
CHD9-221ENST00000615216 AKAP13Q12802 2813 aa2.73□□□□□ -1.97
CHD9-221ENST00000615216 RPL37P61927 97 aaKnown RBP2.73□□□□□ -1.97
CHD9-221ENST00000615216 TRANK1O15050 2925 aa2.72□□□□□ -1.97
CHD9-221ENST00000615216 KRTAP4-16G5E9R7 235 aaPredicted RBP2.72□□□□□ -1.97
CHD9-221ENST00000615216 Q5VSD8 79 aa2.72□□□□□ -1.97
CHD9-221ENST00000615216 KRTAP1-5Q9BYS1 174 aa2.71□□□□□ -1.97
CHD9-221ENST00000615216 CHD6Q8TD26 2715 aa2.71□□□□□ -1.97
CHD9-221ENST00000615216 RPS29P62273 56 aaKnown RBP2.71□□□□□ -1.98
CHD9-221ENST00000615216 PRAC1Q96KF2 57 aa2.71□□□□□ -1.98
CHD9-221ENST00000615216 H3BS24 57 aa2.7□□□□□ -1.98
CHD9-221ENST00000615216 TEP1Q99973 2627 aaKnown RBP2.7□□□□□ -1.98
CHD9-221ENST00000615216 ITPR2Q14571 2701 aa2.7□□□□□ -1.98
CHD9-221ENST00000615216 LCE6AA0A183 80 aa2.7□□□□□ -1.98
CHD9-221ENST00000615216 KRTAP29-1A8MX34 341 aaPredicted RBP2.7□□□□□ -1.98
CHD9-221ENST00000615216 OXTP01178 125 aa2.7□□□□□ -1.98
CHD9-221ENST00000615216 TEX15Q9BXT5 2789 aa2.69□□□□□ -1.98
CHD9-221ENST00000615216 ZNF292O60281 2723 aa2.69□□□□□ -1.98
CHD9-221ENST00000615216 KRTAP10-1P60331 282 aa2.69□□□□□ -1.98
CHD9-221ENST00000615216 C5orf42Q9H799 3197 aa2.69□□□□□ -1.98
CHD9-221ENST00000615216 M0QZ58 72 aa2.68□□□□□ -1.98
CHD9-221ENST00000615216 GOLGB1Q14789 3259 aaKnown RBP2.68□□□□□ -1.98
CHD9-221ENST00000615216 UNC79Q9P2D8 2635 aa2.67□□□□□ -1.98
CHD9-221ENST00000615216 ADM2Q7Z4H4 148 aa2.67□□□□□ -1.98
CHD9-221ENST00000615216 PANO1I0J062 215 aa2.67□□□□□ -1.98
CHD9-221ENST00000615216 PLAC4Q8WY50 150 aa2.67□□□□□ -1.98
CHD9-221ENST00000615216 KRTAP10-2P60368 255 aa2.67□□□□□ -1.98
CHD9-221ENST00000615216 SPATA8Q6RVD6 105 aa2.67□□□□□ -1.98
CHD9-221ENST00000615216 SETXQ7Z333 2677 aaKnown RBP2.66□□□□□ -1.98
CHD9-221ENST00000615216 CHD7Q9P2D1 2997 aa2.66□□□□□ -1.98
CHD9-221ENST00000615216 DMBT1Q9UGM3 2413 aaPredicted RBP2.65□□□□□ -1.98
CHD9-221ENST00000615216 STAB1Q9NY15 2570 aa2.65□□□□□ -1.99
CHD9-221ENST00000615216 CHD9Q3L8U1 2897 aa2.64□□□□□ -1.99
CHD9-221ENST00000615216 COL6A5A8TX70 2615 aa2.64□□□□□ -1.99
CHD9-221ENST00000615216 A0A087X002 238 aa2.63□□□□□ -1.99
CHD9-221ENST00000615216 A6NN06 94 aa2.61□□□□□ -1.99
CHD9-221ENST00000615216 IGSF10Q6WRI0 2623 aa2.61□□□□□ -1.99
CHD9-221ENST00000615216 NOTCH1P46531 2555 aa2.61□□□□□ -1.99
CHD9-221ENST00000615216 KRTAP25-1Q3LHN0 102 aa2.61□□□□□ -1.99
CHD9-221ENST00000615216 Q6ZRN7 208 aaPredicted RBP2.6□□□□□ -1.99
CHD9-221ENST00000615216 APCP25054 2843 aa2.6□□□□□ -1.99
CHD9-221ENST00000615216 NSD1Q96L73 2696 aaPredicted RBP2.6□□□□□ -1.99
CHD9-221ENST00000615216 NOTCH2NLQ7Z3S9 236 aa2.6□□□□□ -1.99
CHD9-221ENST00000615216 STAB2Q8WWQ8 2551 aa2.6□□□□□ -1.99
CHD9-221ENST00000615216 KRTAP13-1Q8IUC0 172 aa2.6□□□□□ -1.99
CHD9-221ENST00000615216 CEP350Q5VT06 3117 aa2.59□□□□□ -1.99
CHD9-221ENST00000615216 MAP1AP78559 2803 aaPredicted RBP2.59□□□□□ -1.99
CHD9-221ENST00000615216 MGAQ8IWI9 3026 aa2.58□□□□□ -2
CHD9-221ENST00000615216 A8MUU9 505 aa2.58□□□□□ -2
CHD9-221ENST00000615216 NBEAL2Q6ZNJ1 2754 aa2.58□□□□□ -2
CHD9-221ENST00000615216 BAHCC1Q9P281 2608 aa2.57□□□□□ -2
CHD9-221ENST00000615216 KRTAP16-1A8MUX0 517 aa2.57□□□□□ -2
CHD9-221ENST00000615216 KRTAP11-1Q8IUC1 163 aa2.57□□□□□ -2
CHD9-221ENST00000615216 KRTAP13-2Q52LG2 175 aa2.56□□□□□ -2
CHD9-221ENST00000615216 KRTAP7-1Q8IUC3 87 aa2.56□□□□□ -2
CHD9-221ENST00000615216 CFAP54Q96N23 3096 aa2.55□□□□□ -2
CHD9-221ENST00000615216 UTP20O75691 2785 aaKnown RBP2.55□□□□□ -2
CHD9-221ENST00000615216 UTRNP46939 3433 aa2.54□□□□□ -2
CHD9-221ENST00000615216 C20orf166-AS1Q96NR2 134 aa2.54□□□□□ -2
CHD9-221ENST00000615216 A8MU10 97 aa2.53□□□□□ -2
CHD9-221ENST00000615216 DSPP15924 2871 aaKnown RBP2.53□□□□□ -2
CHD9-221ENST00000615216 KRTAP21-3Q3LHN1 58 aa2.52□□□□□ -2.01
CHD9-221ENST00000615216 PP632Q6XCG6 107 aa2.52□□□□□ -2.01
CHD9-221ENST00000615216 TNP1P09430 55 aa2.51□□□□□ -2.01
CHD9-221ENST00000615216 HTTP42858 3142 aa2.51□□□□□ -2.01
CHD9-221ENST00000615216 ITPR1Q14643 2758 aa2.5□□□□□ -2.01
CHD9-221ENST00000615216 UBR5O95071 2799 aaPredicted RBP2.5□□□□□ -2.01
CHD9-221ENST00000615216 LRBAP50851 2863 aa2.49□□□□□ -2.01
CHD9-221ENST00000615216 FRYQ5TBA9 3013 aa2.49□□□□□ -2.01
CHD9-221ENST00000615216 A0A0C4DFX4 3053 aa2.48□□□□□ -2.01
CHD9-221ENST00000615216 PCNTO95613 3336 aa2.48□□□□□ -2.01
CHD9-221ENST00000615216 FLNCQ14315 2725 aa2.48□□□□□ -2.01
CHD9-221ENST00000615216 NDUFAF8A1L188 74 aa2.47□□□□□ -2.01
CHD9-221ENST00000615216 C10orf95Q9H7T3 257 aa2.46□□□□□ -2.02
CHD9-221ENST00000615216 LAMA2P24043 3122 aaKnown RBP2.46□□□□□ -2.02
CHD9-221ENST00000615216 KALRNO60229 2985 aa2.45□□□□□ -2.02
CHD9-221ENST00000615216 MKI67P46013 3256 aaKnown RBP2.45□□□□□ -2.02
CHD9-221ENST00000615216 VPS13AQ96RL7 3174 aa2.44□□□□□ -2.02
CHD9-221ENST00000615216 XP32Q5T750 250 aa2.44□□□□□ -2.02
CHD9-221ENST00000615216 TPRXLQ17RH7 258 aa2.43□□□□□ -2.02
CHD9-221ENST00000615216 KRTAP1-4P0C5Y4 121 aa2.43□□□□□ -2.02
CHD9-221ENST00000615216 TRIOO75962 3097 aa2.43□□□□□ -2.02
CHD9-221ENST00000615216 NIPBLQ6KC79 2804 aaeCLIP2.42□□□□□ -2.021e-5■□□□□ 11.1
CHD9-221ENST00000615216 WDFY4Q6ZS81 3184 aa2.42□□□□□ -2.02
CHD9-221ENST00000615216 H0YAA0 97 aa2.42□□□□□ -2.02
CHD9-221ENST00000615216 HIVEP1P15822 2718 aa2.42□□□□□ -2.02
CHD9-221ENST00000615216 PRUNE2Q8WUY3 3088 aa2.42□□□□□ -2.02
CHD9-221ENST00000615216 FRYLO94915 3013 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms