RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 Q9Y3F1 56 aa0.83□□□□□ -2.28
SCAMP1-205ENST00000614488 CELSR3Q9NYQ7 3312 aa0.83□□□□□ -2.28
SCAMP1-205ENST00000614488 DSPP15924 2871 aaKnown RBP0.82□□□□□ -2.28
SCAMP1-205ENST00000614488 SPTAN1Q13813 2472 aaKnown RBP0.82□□□□□ -2.28
SCAMP1-205ENST00000614488 PCLOQ9Y6V0 5065 aa0.82□□□□□ -2.28
SCAMP1-205ENST00000614488 COL12A1Q99715 3063 aa0.82□□□□□ -2.28
SCAMP1-205ENST00000614488 NBPF19A0A087WUL8 3843 aa0.82□□□□□ -2.28
SCAMP1-205ENST00000614488 TRAV21A0A0B4J279 112 aa0.82□□□□□ -2.28
SCAMP1-205ENST00000614488 LINC00959A0A1B0GUT2 108 aa0.82□□□□□ -2.28
SCAMP1-205ENST00000614488 IFI27P40305 119 aaPredicted RBP0.82□□□□□ -2.28
SCAMP1-205ENST00000614488 SPINK9Q5DT21 86 aa0.82□□□□□ -2.28
SCAMP1-205ENST00000614488 HILPDAQ9Y5L2 63 aa0.82□□□□□ -2.28
SCAMP1-205ENST00000614488 BSNQ9UPA5 3926 aa0.82□□□□□ -2.28
SCAMP1-205ENST00000614488 DOPEY2Q9Y3R5 2298 aa0.82□□□□□ -2.28
SCAMP1-205ENST00000614488 PIEZO2Q9H5I5 2752 aa0.82□□□□□ -2.28
SCAMP1-205ENST00000614488 ABCA12Q86UK0 2595 aa0.82□□□□□ -2.28
SCAMP1-205ENST00000614488 CSMD1Q96PZ7 3565 aa0.82□□□□□ -2.28
SCAMP1-205ENST00000614488 SPTBN2O15020 2390 aa0.82□□□□□ -2.28
SCAMP1-205ENST00000614488 NAV3Q8IVL0 2385 aa0.82□□□□□ -2.28
SCAMP1-205ENST00000614488 ITPR3Q14573 2671 aa0.82□□□□□ -2.28
SCAMP1-205ENST00000614488 CREBBPQ92793 2442 aa0.81□□□□□ -2.28
SCAMP1-205ENST00000614488 SPG11Q96JI7 2443 aa0.81□□□□□ -2.28
SCAMP1-205ENST00000614488 CFAP46Q8IYW2 2715 aa0.81□□□□□ -2.28
SCAMP1-205ENST00000614488 IGF2RP11717 2491 aa0.81□□□□□ -2.28
SCAMP1-205ENST00000614488 AHCTF1Q8WYP5 2266 aa0.81□□□□□ -2.28
SCAMP1-205ENST00000614488 SETD2Q9BYW2 2564 aaPredicted RBP0.81□□□□□ -2.28
SCAMP1-205ENST00000614488 ACACAQ13085 2346 aa0.81□□□□□ -2.28
SCAMP1-205ENST00000614488 ATP5EP2Q5VTU8 51 aa0.81□□□□□ -2.28
SCAMP1-205ENST00000614488 WFDC9Q8NEX5 89 aa0.81□□□□□ -2.28
SCAMP1-205ENST00000614488 ATMQ13315 3056 aa0.81□□□□□ -2.28
SCAMP1-205ENST00000614488 BOD1L1Q8NFC6 3051 aa0.81□□□□□ -2.28
SCAMP1-205ENST00000614488 URB1O60287 2271 aaKnown RBP0.81□□□□□ -2.28
SCAMP1-205ENST00000614488 HECTD1Q9ULT8 2610 aa0.81□□□□□ -2.28
SCAMP1-205ENST00000614488 ITPR2Q14571 2701 aa0.8□□□□□ -2.28
SCAMP1-205ENST00000614488 JMJD1CQ15652 2540 aa0.8□□□□□ -2.28
SCAMP1-205ENST00000614488 OTOGQ6ZRI0 2925 aa0.8□□□□□ -2.28
SCAMP1-205ENST00000614488 IFI6P09912 130 aa0.8□□□□□ -2.28
SCAMP1-205ENST00000614488 GAFA1Q96PS6 74 aa0.8□□□□□ -2.28
SCAMP1-205ENST00000614488 C10orf95Q9H7T3 257 aa0.8□□□□□ -2.28
SCAMP1-205ENST00000614488 CELSR1Q9NYQ6 3014 aa0.8□□□□□ -2.28
SCAMP1-205ENST00000614488 CACNA1EQ15878 2313 aa0.8□□□□□ -2.28
SCAMP1-205ENST00000614488 PTPRQQ9UMZ3 2332 aa0.8□□□□□ -2.28
SCAMP1-205ENST00000614488 F8P00451 2351 aa0.79□□□□□ -2.28
SCAMP1-205ENST00000614488 AKAP13Q12802 2813 aa0.79□□□□□ -2.28
SCAMP1-205ENST00000614488 USP9YO00507 2555 aaPredicted RBP0.79□□□□□ -2.28
SCAMP1-205ENST00000614488 LAMA1P25391 3075 aa0.79□□□□□ -2.28
SCAMP1-205ENST00000614488 CEP295Q9C0D2 2601 aa0.79□□□□□ -2.28
SCAMP1-205ENST00000614488 A0A0D9SG42 100 aa0.79□□□□□ -2.28
SCAMP1-205ENST00000614488 NF1P21359 2839 aa0.79□□□□□ -2.28
SCAMP1-205ENST00000614488 APC2O95996 2303 aa0.79□□□□□ -2.28
SCAMP1-205ENST00000614488 HIVEP3Q5T1R4 2406 aa0.79□□□□□ -2.28
SCAMP1-205ENST00000614488 ADGRG4Q8IZF6 3080 aa0.79□□□□□ -2.28
SCAMP1-205ENST00000614488 SPENQ96T58 3664 aaKnown RBP0.79□□□□□ -2.28
SCAMP1-205ENST00000614488 PDZD2O15018 2839 aa0.79□□□□□ -2.28
SCAMP1-205ENST00000614488 MGAQ8IWI9 3026 aa0.78□□□□□ -2.28
SCAMP1-205ENST00000614488 LRRK2Q5S007 2527 aa0.78□□□□□ -2.28
SCAMP1-205ENST00000614488 POLQO75417 2590 aa0.78□□□□□ -2.28
SCAMP1-205ENST00000614488 A0A0D9SFI3 127 aa0.78□□□□□ -2.28
SCAMP1-205ENST00000614488 COX8AP10176 69 aa0.78□□□□□ -2.28
SCAMP1-205ENST00000614488 S100ZQ8WXG8 99 aa0.78□□□□□ -2.28
SCAMP1-205ENST00000614488 TP53AIP1Q9HCN2 124 aa0.78□□□□□ -2.28
SCAMP1-205ENST00000614488 CRIPTQ9P021 101 aa0.78□□□□□ -2.28
SCAMP1-205ENST00000614488 NBASA2RRP1 2371 aa0.78□□□□□ -2.28
SCAMP1-205ENST00000614488 CSMD2Q7Z408 3487 aa0.78□□□□□ -2.28
SCAMP1-205ENST00000614488 HIVEP1P15822 2718 aa0.78□□□□□ -2.29
SCAMP1-205ENST00000614488 APCP25054 2843 aa0.78□□□□□ -2.29
SCAMP1-205ENST00000614488 BIRC6Q9NR09 4857 aa0.77□□□□□ -2.29
SCAMP1-205ENST00000614488 MTORP42345 2549 aa0.77□□□□□ -2.29
SCAMP1-205ENST00000614488 LRBAP50851 2863 aa0.77□□□□□ -2.29
SCAMP1-205ENST00000614488 RYR3Q15413 4870 aa0.77□□□□□ -2.29
SCAMP1-205ENST00000614488 CELSR2Q9HCU4 2923 aa0.77□□□□□ -2.29
SCAMP1-205ENST00000614488 NDUFB1O75438 58 aa0.77□□□□□ -2.29
SCAMP1-205ENST00000614488 COX7BP24311 80 aa0.77□□□□□ -2.29
SCAMP1-205ENST00000614488 NREPQ16612 68 aa0.77□□□□□ -2.29
SCAMP1-205ENST00000614488 GNG13Q9P2W3 67 aa0.77□□□□□ -2.29
SCAMP1-205ENST00000614488 AKAP9Q99996 3911 aa0.77□□□□□ -2.29
SCAMP1-205ENST00000614488 KMT2CQ8NEZ4 4911 aaKnown RBP0.77□□□□□ -2.29
SCAMP1-205ENST00000614488 SPTBN1Q01082 2364 aaKnown RBP0.77□□□□□ -2.29
SCAMP1-205ENST00000614488 TLN1Q9Y490 2541 aaKnown RBP0.77□□□□□ -2.29
SCAMP1-205ENST00000614488 ATRQ13535 2644 aa0.77□□□□□ -2.29
SCAMP1-205ENST00000614488 CRYBG3Q68DQ2 2970 aa0.77□□□□□ -2.29
SCAMP1-205ENST00000614488 CUBNO60494 3623 aa0.76□□□□□ -2.29
SCAMP1-205ENST00000614488 FLNCQ14315 2725 aa0.76□□□□□ -2.29
SCAMP1-205ENST00000614488 ANKHD1Q8IWZ3 2542 aaKnown RBP0.76□□□□□ -2.29
SCAMP1-205ENST00000614488 HYDINQ4G0P3 5121 aa0.76□□□□□ -2.29
SCAMP1-205ENST00000614488 A0A087WWC5 75 aa0.76□□□□□ -2.29
SCAMP1-205ENST00000614488 FXYD6-FXYD2A0A087WZ82 144 aa0.76□□□□□ -2.29
SCAMP1-205ENST00000614488 I3L2K1 104 aa0.76□□□□□ -2.29
SCAMP1-205ENST00000614488 HMGA1P17096 107 aaKnown RBP0.76□□□□□ -2.29
SCAMP1-205ENST00000614488 FAM103A1Q9BTL3 118 aaKnown RBP0.76□□□□□ -2.29
SCAMP1-205ENST00000614488 MUC5BQ9HC84 5762 aaPredicted RBP0.76□□□□□ -2.29
SCAMP1-205ENST00000614488 NIPBLQ6KC79 2804 aaeCLIP0.75□□□□□ -2.29
SCAMP1-205ENST00000614488 EPPK1P58107 5090 aaKnown RBP0.75□□□□□ -2.29
SCAMP1-205ENST00000614488 GOLGA4Q13439 2230 aaKnown RBP0.75□□□□□ -2.29
SCAMP1-205ENST00000614488 COX6A2Q02221 97 aa0.75□□□□□ -2.29
SCAMP1-205ENST00000614488 ATXN8Q156A1 80 aa0.75□□□□□ -2.29
SCAMP1-205ENST00000614488 PRO0255Q9UI72 69 aa0.75□□□□□ -2.29
SCAMP1-205ENST00000614488 AHNAKQ09666 5890 aaKnown RBP0.75□□□□□ -2.29
SCAMP1-205ENST00000614488 CCDC168Q8NDH2 2452 aa0.75□□□□□ -2.29
SCAMP1-205ENST00000614488 CSPG4Q6UVK1 2322 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms