RNA–Protein interactions for RNA: ENST00000613246.4

PTPRJ-207, Transcript of protein tyrosine phosphatase, receptor type J, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRJ, Length 7,851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRJ-207ENST00000613246 PLAC4Q8WY50 150 aa11.58□□□□□ -0.56
PTPRJ-207ENST00000613246 TNP2Q05952 138 aa11.56□□□□□ -0.56
PTPRJ-207ENST00000613246 RPL37P61927 97 aaKnown RBP11.54□□□□□ -0.56
PTPRJ-207ENST00000613246 KLK9Q2XQG4 91 aa11.54□□□□□ -0.56
PTPRJ-207ENST00000613246 Q5XG85 94 aa11.54□□□□□ -0.56
PTPRJ-207ENST00000613246 A0A0C4DFX4 3053 aa11.53□□□□□ -0.56
PTPRJ-207ENST00000613246 CHD6Q8TD26 2715 aa11.53□□□□□ -0.56
PTPRJ-207ENST00000613246 KRTAP16-1A8MUX0 517 aa11.52□□□□□ -0.57
PTPRJ-207ENST00000613246 ATRQ13535 2644 aa11.51□□□□□ -0.57
PTPRJ-207ENST00000613246 Q5W150 140 aa11.51□□□□□ -0.57
PTPRJ-207ENST00000613246 M0QZ58 72 aa11.51□□□□□ -0.57
PTPRJ-207ENST00000613246 MAST4O15021 2626 aa11.48□□□□□ -0.57
PTPRJ-207ENST00000613246 FP248Q71RG6 208 aaPredicted RBP11.47□□□□□ -0.57
PTPRJ-207ENST00000613246 MMP24-AS1A0A0U1RRL7 71 aa11.46□□□□□ -0.57
PTPRJ-207ENST00000613246 FREM2Q5SZK8 3169 aa11.45□□□□□ -0.58
PTPRJ-207ENST00000613246 FLNAP21333 2647 aaKnown RBP11.44□□□□□ -0.58
PTPRJ-207ENST00000613246 ITPR3Q14573 2671 aa11.44□□□□□ -0.58
PTPRJ-207ENST00000613246 SEC61BP60468 96 aaKnown RBP11.41□□□□□ -0.58
PTPRJ-207ENST00000613246 ADM2Q7Z4H4 148 aa11.38□□□□□ -0.59
PTPRJ-207ENST00000613246 CELSR3Q9NYQ7 3312 aa11.38□□□□□ -0.59
PTPRJ-207ENST00000613246 CYSTM1Q9H1C7 97 aa11.36□□□□□ -0.59
PTPRJ-207ENST00000613246 C20orf166-AS1Q96NR2 134 aa11.35□□□□□ -0.59
PTPRJ-207ENST00000613246 SPATA8Q6RVD6 105 aa11.32□□□□□ -0.6
PTPRJ-207ENST00000613246 TEX15Q9BXT5 2789 aa11.32□□□□□ -0.6
PTPRJ-207ENST00000613246 RANBP2P49792 3224 aaKnown RBP11.31□□□□□ -0.6
PTPRJ-207ENST00000613246 A0A096LNT2 108 aa11.31□□□□□ -0.6
PTPRJ-207ENST00000613246 COL6A5A8TX70 2615 aa11.28□□□□□ -0.6
PTPRJ-207ENST00000613246 PLAC8Q9NZF1 115 aa11.26□□□□□ -0.61
PTPRJ-207ENST00000613246 Q8NDZ9 215 aa11.25□□□□□ -0.61
PTPRJ-207ENST00000613246 LINC00472Q9H8W2 130 aa11.24□□□□□ -0.61
PTPRJ-207ENST00000613246 Q5VSD8 79 aa11.23□□□□□ -0.61
PTPRJ-207ENST00000613246 MKI67P46013 3256 aaKnown RBP11.21□□□□□ -0.62
PTPRJ-207ENST00000613246 STAB2Q8WWQ8 2551 aa11.2□□□□□ -0.62
PTPRJ-207ENST00000613246 NOTCH1P46531 2555 aa11.2□□□□□ -0.62
PTPRJ-207ENST00000613246 TRIOO75962 3097 aa11.19□□□□□ -0.62
PTPRJ-207ENST00000613246 UNC79Q9P2D8 2635 aa11.17□□□□□ -0.62
PTPRJ-207ENST00000613246 VPS13AQ96RL7 3174 aa11.14□□□□□ -0.63
PTPRJ-207ENST00000613246 ASB16-AS1Q495Z4 193 aa11.13□□□□□ -0.63
PTPRJ-207ENST00000613246 KRTAP26-1Q6PEX3 210 aa11.09□□□□□ -0.63
PTPRJ-207ENST00000613246 KMT2BQ9UMN6 2715 aaPredicted RBP11.09□□□□□ -0.63
PTPRJ-207ENST00000613246 FLNBO75369 2602 aaKnown RBP11.09□□□□□ -0.63
PTPRJ-207ENST00000613246 SPRR1AP35321 89 aa11.08□□□□□ -0.64
PTPRJ-207ENST00000613246 HELZ2Q9BYK8 2649 aaKnown RBP11.06□□□□□ -0.64
PTPRJ-207ENST00000613246 APCP25054 2843 aa11.06□□□□□ -0.64
PTPRJ-207ENST00000613246 BAHCC1Q9P281 2608 aa11.05□□□□□ -0.64
PTPRJ-207ENST00000613246 DNAH14Q0VDD8 3507 aa11.05□□□□□ -0.64
PTPRJ-207ENST00000613246 NDUFAF8A1L188 74 aa11.04□□□□□ -0.64
PTPRJ-207ENST00000613246 Q6ZR54 194 aa11.04□□□□□ -0.64
PTPRJ-207ENST00000613246 GCN1Q92616 2671 aaKnown RBP11.04□□□□□ -0.64
PTPRJ-207ENST00000613246 KRTAP25-1Q3LHN0 102 aa11.03□□□□□ -0.64
PTPRJ-207ENST00000613246 PANO1I0J062 215 aa11.03□□□□□ -0.64
PTPRJ-207ENST00000613246 OXTP01178 125 aa11.02□□□□□ -0.64
PTPRJ-207ENST00000613246 UNC80Q8N2C7 3258 aa11.02□□□□□ -0.64
PTPRJ-207ENST00000613246 DSPP15924 2871 aaKnown RBP11.01□□□□□ -0.65
PTPRJ-207ENST00000613246 WDFY4Q6ZS81 3184 aa10.98□□□□□ -0.65
PTPRJ-207ENST00000613246 KRTAP1-3Q8IUG1 177 aa10.97□□□□□ -0.65
PTPRJ-207ENST00000613246 A8MUU9 505 aa10.95□□□□□ -0.66
PTPRJ-207ENST00000613246 SPRR1BP22528 89 aa10.94□□□□□ -0.66
PTPRJ-207ENST00000613246 C10orf95Q9H7T3 257 aa10.91□□□□□ -0.66
PTPRJ-207ENST00000613246 BRCA2P51587 3418 aa10.9□□□□□ -0.66
PTPRJ-207ENST00000613246 A8MU10 97 aa10.89□□□□□ -0.67
PTPRJ-207ENST00000613246 FRYQ5TBA9 3013 aa10.89□□□□□ -0.67
PTPRJ-207ENST00000613246 MGAQ8IWI9 3026 aa10.85□□□□□ -0.67
PTPRJ-207ENST00000613246 KRTAP1-1Q07627 177 aa10.85□□□□□ -0.67
PTPRJ-207ENST00000613246 ITPR2Q14571 2701 aa10.85□□□□□ -0.67
PTPRJ-207ENST00000613246 KRTAP10-1P60331 282 aa10.85□□□□□ -0.67
PTPRJ-207ENST00000613246 MAP1AP78559 2803 aaPredicted RBP10.83□□□□□ -0.68
PTPRJ-207ENST00000613246 KALRNO60229 2985 aa10.82□□□□□ -0.68
PTPRJ-207ENST00000613246 ASH1LQ9NR48 2969 aaKnown RBP10.81□□□□□ -0.68
PTPRJ-207ENST00000613246 NSD1Q96L73 2696 aaPredicted RBP10.81□□□□□ -0.68
PTPRJ-207ENST00000613246 KRTAP10-2P60368 255 aa10.8□□□□□ -0.68
PTPRJ-207ENST00000613246 NBEAL2Q6ZNJ1 2754 aa10.78□□□□□ -0.68
PTPRJ-207ENST00000613246 TRANK1O15050 2925 aa10.77□□□□□ -0.69
PTPRJ-207ENST00000613246 TNP1P09430 55 aa10.76□□□□□ -0.69
PTPRJ-207ENST00000613246 PRUNE2Q8WUY3 3088 aa10.76□□□□□ -0.69
PTPRJ-207ENST00000613246 KRTAP1-5Q9BYS1 174 aa10.75□□□□□ -0.69
PTPRJ-207ENST00000613246 A6NN06 94 aa10.74□□□□□ -0.69
PTPRJ-207ENST00000613246 TEP1Q99973 2627 aaKnown RBP10.74□□□□□ -0.69
PTPRJ-207ENST00000613246 A0A087X002 238 aa10.73□□□□□ -0.69
PTPRJ-207ENST00000613246 CRYBG3Q68DQ2 2970 aa10.73□□□□□ -0.69
PTPRJ-207ENST00000613246 LAMA3Q16787 3333 aa10.72□□□□□ -0.69
PTPRJ-207ENST00000613246 HTTP42858 3142 aa10.71□□□□□ -0.7
PTPRJ-207ENST00000613246 CDH23Q9H251 3354 aa10.69□□□□□ -0.7
PTPRJ-207ENST00000613246 UTP20O75691 2785 aaKnown RBP10.66□□□□□ -0.7
PTPRJ-207ENST00000613246 NOTCH2NLQ7Z3S9 236 aa10.65□□□□□ -0.7
PTPRJ-207ENST00000613246 KRTAP29-1A8MX34 341 aaPredicted RBP10.65□□□□□ -0.71
PTPRJ-207ENST00000613246 SPEGQ15772 3267 aa10.64□□□□□ -0.71
PTPRJ-207ENST00000613246 COL12A1Q99715 3063 aa10.63□□□□□ -0.71
PTPRJ-207ENST00000613246 UBR5O95071 2799 aaPredicted RBP10.61□□□□□ -0.71
PTPRJ-207ENST00000613246 LCE6AA0A183 80 aa10.61□□□□□ -0.71
PTPRJ-207ENST00000613246 FRYLO94915 3013 aa10.61□□□□□ -0.71
PTPRJ-207ENST00000613246 ZNF292O60281 2723 aa10.59□□□□□ -0.71
PTPRJ-207ENST00000613246 CHD7Q9P2D1 2997 aa10.58□□□□□ -0.72
PTPRJ-207ENST00000613246 SETXQ7Z333 2677 aaKnown RBP10.58□□□□□ -0.72
PTPRJ-207ENST00000613246 LRBAP50851 2863 aa10.57□□□□□ -0.72
PTPRJ-207ENST00000613246 COL6A3P12111 3177 aa10.56□□□□□ -0.72
PTPRJ-207ENST00000613246 CFAP47Q6ZTR5 3102 aa10.56□□□□□ -0.72
PTPRJ-207ENST00000613246 ITPR1Q14643 2758 aa10.55□□□□□ -0.72
PTPRJ-207ENST00000613246 IGSF10Q6WRI0 2623 aa10.54□□□□□ -0.72
PTPRJ-207ENST00000613246 LAMA1P25391 3075 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms