RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 LINC01600Q96MT4 127 aa10.57□□□□□ -0.72
SREK1-216ENST00000612404 NDUFV3P56181 108 aaKnown RBP10.55□□□□□ -0.72
SREK1-216ENST00000612404 SPINK6Q6UWN8 80 aa10.55□□□□□ -0.72
SREK1-216ENST00000612404 ANAPC11Q9NYG5 84 aa10.55□□□□□ -0.72
SREK1-216ENST00000612404 BIRC6Q9NR09 4857 aa10.55□□□□□ -0.72
SREK1-216ENST00000612404 SPRR1BP22528 89 aa10.54□□□□□ -0.72
SREK1-216ENST00000612404 SMIM29Q86T20 159 aa10.53□□□□□ -0.72
SREK1-216ENST00000612404 TEN1Q86WV5 123 aa10.53□□□□□ -0.72
SREK1-216ENST00000612404 LINC00483Q53H64 154 aa10.52□□□□□ -0.72
SREK1-216ENST00000612404 K7ERU9 68 aa10.52□□□□□ -0.73
SREK1-216ENST00000612404 F8WEM9 126 aa10.51□□□□□ -0.73
SREK1-216ENST00000612404 Q8N1X5 172 aa10.51□□□□□ -0.73
SREK1-216ENST00000612404 KRTAP17-1Q9BYP8 105 aa10.51□□□□□ -0.73
SREK1-216ENST00000612404 JMJD7-PLA2G4BH0Y9G9 81 aa10.49□□□□□ -0.73
SREK1-216ENST00000612404 IGLV9-49A0A0B4J1Y8 123 aa10.48□□□□□ -0.73
SREK1-216ENST00000612404 RBM3P98179 157 aaKnown RBP10.48□□□□□ -0.73
SREK1-216ENST00000612404 PKHD1L1Q86WI1 4243 aa10.48□□□□□ -0.73
SREK1-216ENST00000612404 OBSCN-AS1Q96MR7 158 aa10.47□□□□□ -0.73
SREK1-216ENST00000612404 C14orf132Q9NPU4 83 aa10.47□□□□□ -0.73
SREK1-216ENST00000612404 KRTAP1-4P0C5Y4 121 aa10.46□□□□□ -0.74
SREK1-216ENST00000612404 C9orf153Q5TBE3 101 aa10.45□□□□□ -0.74
SREK1-216ENST00000612404 PCP4P48539 62 aa10.45□□□□□ -0.74
SREK1-216ENST00000612404 DSCR8Q96T75 97 aa10.45□□□□□ -0.74
SREK1-216ENST00000612404 VPS25Q9BRG1 176 aa10.43□□□□□ -0.74
SREK1-216ENST00000612404 MOBPQ13875 183 aa10.42□□□□□ -0.74
SREK1-216ENST00000612404 A0A087X002 238 aa10.42□□□□□ -0.74
SREK1-216ENST00000612404 FAM229BQ4G0N7 80 aa10.42□□□□□ -0.74
SREK1-216ENST00000612404 CRYGAP11844 174 aa10.4□□□□□ -0.74
SREK1-216ENST00000612404 IGLV8-61A0A075B6I0 122 aa10.4□□□□□ -0.74
SREK1-216ENST00000612404 A0A0G2JQZ4 141 aa10.39□□□□□ -0.75
SREK1-216ENST00000612404 TRBV7-4A0A0J9YYF1 115 aa10.39□□□□□ -0.75
SREK1-216ENST00000612404 Q8NBF4 154 aa10.38□□□□□ -0.75
SREK1-216ENST00000612404 LOC110117498A0A087WWA1 95 aa10.37□□□□□ -0.75
SREK1-216ENST00000612404 IGFL1Q6UW32 110 aa10.37□□□□□ -0.75
SREK1-216ENST00000612404 KRTAP13-2Q52LG2 175 aa10.37□□□□□ -0.75
SREK1-216ENST00000612404 Q6JHZ5 121 aa10.37□□□□□ -0.75
SREK1-216ENST00000612404 Q6ZQT0 140 aa10.37□□□□□ -0.75
SREK1-216ENST00000612404 HERC2O95714 4834 aa10.36□□□□□ -0.75
SREK1-216ENST00000612404 PDE6GP18545 87 aa10.36□□□□□ -0.75
SREK1-216ENST00000612404 CCKP06307 115 aa10.35□□□□□ -0.75
SREK1-216ENST00000612404 PRR26Q8N8Z3 221 aa10.35□□□□□ -0.75
SREK1-216ENST00000612404 FLG2Q5D862 2391 aaPredicted RBP10.33□□□□□ -0.76
SREK1-216ENST00000612404 TYMSOSQ8TAI1 123 aa10.32□□□□□ -0.76
SREK1-216ENST00000612404 KRTAP4-5Q9BYR2 181 aa10.32□□□□□ -0.76
SREK1-216ENST00000612404 SSBP3-AS1Q7Z2R9 100 aa10.31□□□□□ -0.76
SREK1-216ENST00000612404 A0A1W2PNM2 257 aa10.3□□□□□ -0.76
SREK1-216ENST00000612404 J3QR89 54 aa10.3□□□□□ -0.76
SREK1-216ENST00000612404 C21orf62-AS1Q17RA5 79 aa10.3□□□□□ -0.76
SREK1-216ENST00000612404 LRP1Q07954 4544 aaKnown RBP10.3□□□□□ -0.76
SREK1-216ENST00000612404 MYCBP2O75592 4640 aa10.29□□□□□ -0.76
SREK1-216ENST00000612404 HRCT1Q6UXD1 115 aa10.29□□□□□ -0.76
SREK1-216ENST00000612404 ABCA13Q86UQ4 5058 aa10.27□□□□□ -0.77
SREK1-216ENST00000612404 FAT3Q8TDW7 4589 aa10.26□□□□□ -0.77
SREK1-216ENST00000612404 Q6Q795 121 aa10.22□□□□□ -0.77
SREK1-216ENST00000612404 A0A087WSZ3 146 aa10.21□□□□□ -0.78
SREK1-216ENST00000612404 FAM240AA0A1B0GVK7 77 aa10.21□□□□□ -0.78
SREK1-216ENST00000612404 ACYP1P07311 99 aa10.21□□□□□ -0.78
SREK1-216ENST00000612404 C4orf48Q5BLP8 95 aa10.21□□□□□ -0.78
SREK1-216ENST00000612404 TRBV7-7A0A0K0K1E9 115 aa10.2□□□□□ -0.78
SREK1-216ENST00000612404 CD164Q04900 197 aa10.19□□□□□ -0.78
SREK1-216ENST00000612404 LINC00304Q8N9R0 145 aa10.19□□□□□ -0.78
SREK1-216ENST00000612404 LINC00846Q9NV44 126 aa10.19□□□□□ -0.78
SREK1-216ENST00000612404 TNXBP22105 4242 aa10.19□□□□□ -0.78
SREK1-216ENST00000612404 A0A1B0GW54 56 aa10.18□□□□□ -0.78
SREK1-216ENST00000612404 SIGMAR1Q99720 223 aa10.17□□□□□ -0.78
SREK1-216ENST00000612404 SCGB1A1P11684 91 aa10.16□□□□□ -0.78
SREK1-216ENST00000612404 KRTAP10-8P60410 259 aa10.16□□□□□ -0.78
SREK1-216ENST00000612404 UBL5Q9BZL1 73 aa10.14□□□□□ -0.79
SREK1-216ENST00000612404 SPINK1P00995 79 aa10.13□□□□□ -0.79
SREK1-216ENST00000612404 NREPQ16612 68 aa10.13□□□□□ -0.79
SREK1-216ENST00000612404 SPAG11AQ6PDA7 123 aa10.13□□□□□ -0.79
SREK1-216ENST00000612404 OXTP01178 125 aa10.12□□□□□ -0.79
SREK1-216ENST00000612404 SS18L2Q9UHA2 77 aa10.12□□□□□ -0.79
SREK1-216ENST00000612404 Q6ZVQ6 151 aa10.11□□□□□ -0.79
SREK1-216ENST00000612404 MT1HL1P0DM35 61 aa10.09□□□□□ -0.79
SREK1-216ENST00000612404 LIMD2Q9BT23 127 aa10.09□□□□□ -0.79
SREK1-216ENST00000612404 CDIP1Q9H305 208 aa10.09□□□□□ -0.79
SREK1-216ENST00000612404 DMBT1Q9UGM3 2413 aaPredicted RBP10.06□□□□□ -0.8
SREK1-216ENST00000612404 KRTAP29-1A8MX34 341 aaPredicted RBP10.06□□□□□ -0.8
SREK1-216ENST00000612404 DEFB116Q30KQ4 102 aa10.06□□□□□ -0.8
SREK1-216ENST00000612404 RPS29P62273 56 aaKnown RBP10.04□□□□□ -0.8
SREK1-216ENST00000612404 PCLOQ9Y6V0 5065 aa10.04□□□□□ -0.8
SREK1-216ENST00000612404 Q5XG85 94 aa10.04□□□□□ -0.8
SREK1-216ENST00000612404 LINC00643Q86TS7 51 aa10.02□□□□□ -0.81
SREK1-216ENST00000612404 LINC00472Q9H8W2 130 aa10.02□□□□□ -0.81
SREK1-216ENST00000612404 ASB16-AS1Q495Z4 193 aa10.01□□□□□ -0.81
SREK1-216ENST00000612404 Q96NJ1 140 aa10.01□□□□□ -0.81
SREK1-216ENST00000612404 BPY2O14599 106 aa10□□□□□ -0.81
SREK1-216ENST00000612404 IGKV3D-7A0A0C4DH55 119 aa9.99□□□□□ -0.81
SREK1-216ENST00000612404 J3QL48 77 aa9.99□□□□□ -0.81
SREK1-216ENST00000612404 IGKV4-1P06312 121 aa9.98□□□□□ -0.81
SREK1-216ENST00000612404 C1orf195Q5TG92 126 aa9.98□□□□□ -0.81
SREK1-216ENST00000612404 MT-ATP8P03928 68 aa9.95□□□□□ -0.82
SREK1-216ENST00000612404 ATP5EP2Q5VTU8 51 aa9.95□□□□□ -0.82
SREK1-216ENST00000612404 J3KT08 172 aa9.94□□□□□ -0.82
SREK1-216ENST00000612404 CXCL6P80162 114 aa9.94□□□□□ -0.82
SREK1-216ENST00000612404 RETNLBQ9BQ08 111 aa9.94□□□□□ -0.82
SREK1-216ENST00000612404 DSCR10P59022 87 aa9.92□□□□□ -0.82
SREK1-216ENST00000612404 Q8N9L7 120 aa9.92□□□□□ -0.82
SREK1-216ENST00000612404 A8MWP4 228 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms