RNA–Protein interactions for RNA: ENST00000612229.4

PTPRT-209, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

TSL 5 BASIC

Gene PTPRT, Length 11,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-209ENST00000612229 SEC61BP60468 96 aaKnown RBP4.42□□□□□ -1.7
PTPRT-209ENST00000612229 Q5VV11 94 aa4.41□□□□□ -1.7
PTPRT-209ENST00000612229 ZCCHC13Q8WW36 166 aaKnown RBP4.41□□□□□ -1.7
PTPRT-209ENST00000612229 A0A0G2JQZ4 141 aa4.41□□□□□ -1.7
PTPRT-209ENST00000612229 A0A1W2PNN7 141 aa4.41□□□□□ -1.7
PTPRT-209ENST00000612229 PLAC4Q8WY50 150 aa4.4□□□□□ -1.7
PTPRT-209ENST00000612229 KRTAP24-1Q3LI83 254 aa4.39□□□□□ -1.71
PTPRT-209ENST00000612229 A0A087X002 238 aa4.39□□□□□ -1.71
PTPRT-209ENST00000612229 CEP350Q5VT06 3117 aa4.39□□□□□ -1.71
PTPRT-209ENST00000612229 STAB2Q8WWQ8 2551 aa4.38□□□□□ -1.71
PTPRT-209ENST00000612229 APCP25054 2843 aa4.38□□□□□ -1.71
PTPRT-209ENST00000612229 OXTP01178 125 aa4.38□□□□□ -1.71
PTPRT-209ENST00000612229 MAP1AP78559 2803 aaPredicted RBP4.37□□□□□ -1.71
PTPRT-209ENST00000612229 KRTAP10-11P60412 298 aa4.36□□□□□ -1.71
PTPRT-209ENST00000612229 CFAP54Q96N23 3096 aa4.36□□□□□ -1.71
PTPRT-209ENST00000612229 ITPR2Q14571 2701 aa4.36□□□□□ -1.71
PTPRT-209ENST00000612229 C5orf42Q9H799 3197 aa4.36□□□□□ -1.71
PTPRT-209ENST00000612229 A0A096LNT2 108 aa4.35□□□□□ -1.71
PTPRT-209ENST00000612229 ANAPC11Q9NYG5 84 aa4.35□□□□□ -1.71
PTPRT-209ENST00000612229 CYSTM1Q9H1C7 97 aa4.35□□□□□ -1.71
PTPRT-209ENST00000612229 TEP1Q99973 2627 aaKnown RBP4.34□□□□□ -1.72
PTPRT-209ENST00000612229 MMP24-AS1A0A0U1RRL7 71 aa4.34□□□□□ -1.72
PTPRT-209ENST00000612229 GOLGB1Q14789 3259 aaKnown RBP4.34□□□□□ -1.72
PTPRT-209ENST00000612229 PRAC1Q96KF2 57 aa4.33□□□□□ -1.72
PTPRT-209ENST00000612229 K7EIL1 84 aa4.32□□□□□ -1.72
PTPRT-209ENST00000612229 M0QZ58 72 aa4.31□□□□□ -1.72
PTPRT-209ENST00000612229 ITPR1Q14643 2758 aa4.3□□□□□ -1.72
PTPRT-209ENST00000612229 ZNF292O60281 2723 aa4.3□□□□□ -1.72
PTPRT-209ENST00000612229 Q5W150 140 aa4.29□□□□□ -1.72
PTPRT-209ENST00000612229 SPRR1AP35321 89 aa4.29□□□□□ -1.72
PTPRT-209ENST00000612229 LINC00472Q9H8W2 130 aa4.29□□□□□ -1.72
PTPRT-209ENST00000612229 PLAC8Q9NZF1 115 aa4.29□□□□□ -1.72
PTPRT-209ENST00000612229 A0A0C4DFX4 3053 aa4.29□□□□□ -1.72
PTPRT-209ENST00000612229 SETXQ7Z333 2677 aaKnown RBP4.28□□□□□ -1.72
PTPRT-209ENST00000612229 NBEAL2Q6ZNJ1 2754 aa4.28□□□□□ -1.72
PTPRT-209ENST00000612229 CASC10Q5T4H9 136 aa4.28□□□□□ -1.72
PTPRT-209ENST00000612229 Q6ZR54 194 aa4.27□□□□□ -1.73
PTPRT-209ENST00000612229 PCNTO95613 3336 aa4.27□□□□□ -1.73
PTPRT-209ENST00000612229 RPS29P62273 56 aaKnown RBP4.27□□□□□ -1.73
PTPRT-209ENST00000612229 SPATA8Q6RVD6 105 aa4.26□□□□□ -1.73
PTPRT-209ENST00000612229 SPRR1BP22528 89 aa4.26□□□□□ -1.73
PTPRT-209ENST00000612229 PANO1I0J062 215 aa4.26□□□□□ -1.73
PTPRT-209ENST00000612229 TRANK1O15050 2925 aa4.26□□□□□ -1.73
PTPRT-209ENST00000612229 SMR3BP02814 79 aaPredicted RBP4.25□□□□□ -1.73
PTPRT-209ENST00000612229 KRTAP25-1Q3LHN0 102 aa4.25□□□□□ -1.73
PTPRT-209ENST00000612229 UTP20O75691 2785 aaKnown RBP4.24□□□□□ -1.73
PTPRT-209ENST00000612229 PP632Q6XCG6 107 aa4.24□□□□□ -1.73
PTPRT-209ENST00000612229 KRTAP10-3P60369 221 aa4.24□□□□□ -1.73
PTPRT-209ENST00000612229 BAHCC1Q9P281 2608 aa4.24□□□□□ -1.73
PTPRT-209ENST00000612229 C20orf166-AS1Q96NR2 134 aa4.24□□□□□ -1.73
PTPRT-209ENST00000612229 LAMA2P24043 3122 aaKnown RBP4.23□□□□□ -1.73
PTPRT-209ENST00000612229 UTRNP46939 3433 aa4.23□□□□□ -1.73
PTPRT-209ENST00000612229 DSPP15924 2871 aaKnown RBP4.22□□□□□ -1.73
PTPRT-209ENST00000612229 NSD1Q96L73 2696 aaPredicted RBP4.2□□□□□ -1.74
PTPRT-209ENST00000612229 Q8NDZ9 215 aa4.19□□□□□ -1.74
PTPRT-209ENST00000612229 KRTAP26-1Q6PEX3 210 aa4.19□□□□□ -1.74
PTPRT-209ENST00000612229 UBR5O95071 2799 aaPredicted RBP4.18□□□□□ -1.74
PTPRT-209ENST00000612229 ADM2Q7Z4H4 148 aa4.18□□□□□ -1.74
PTPRT-209ENST00000612229 A6NN06 94 aa4.17□□□□□ -1.74
PTPRT-209ENST00000612229 MGAQ8IWI9 3026 aa4.17□□□□□ -1.74
PTPRT-209ENST00000612229 FRYQ5TBA9 3013 aa4.17□□□□□ -1.74
PTPRT-209ENST00000612229 LCE6AA0A183 80 aa4.16□□□□□ -1.74
PTPRT-209ENST00000612229 NDUFAF8A1L188 74 aa4.15□□□□□ -1.74
PTPRT-209ENST00000612229 TNP1P09430 55 aa4.15□□□□□ -1.75
PTPRT-209ENST00000612229 LRBAP50851 2863 aa4.15□□□□□ -1.75
PTPRT-209ENST00000612229 CHD7Q9P2D1 2997 aa4.15□□□□□ -1.75
PTPRT-209ENST00000612229 KRTAP1-3Q8IUG1 177 aa4.14□□□□□ -1.75
PTPRT-209ENST00000612229 KRTAP29-1A8MX34 341 aaPredicted RBP4.14□□□□□ -1.75
PTPRT-209ENST00000612229 KALRNO60229 2985 aa4.12□□□□□ -1.75
PTPRT-209ENST00000612229 VPS13AQ96RL7 3174 aa4.12□□□□□ -1.75
PTPRT-209ENST00000612229 IGSF10Q6WRI0 2623 aa4.11□□□□□ -1.75
PTPRT-209ENST00000612229 Q5VSD8 79 aa4.11□□□□□ -1.75
PTPRT-209ENST00000612229 KRTAP4-16G5E9R7 235 aaPredicted RBP4.11□□□□□ -1.75
PTPRT-209ENST00000612229 KRTAP1-1Q07627 177 aa4.1□□□□□ -1.75
PTPRT-209ENST00000612229 FRYLO94915 3013 aa4.1□□□□□ -1.75
PTPRT-209ENST00000612229 A8MUU9 505 aa4.1□□□□□ -1.75
PTPRT-209ENST00000612229 NOTCH2NLQ7Z3S9 236 aa4.07□□□□□ -1.76
PTPRT-209ENST00000612229 TACC2O95359 2948 aa4.06□□□□□ -1.76
PTPRT-209ENST00000612229 TRIOO75962 3097 aa4.04□□□□□ -1.76
PTPRT-209ENST00000612229 C10orf95Q9H7T3 257 aa4.03□□□□□ -1.76
PTPRT-209ENST00000612229 CHD9Q3L8U1 2897 aa4.03□□□□□ -1.76
PTPRT-209ENST00000612229 P0C880 135 aa4.02□□□□□ -1.77
PTPRT-209ENST00000612229 NBEAQ8NFP9 2946 aa4.02□□□□□ -1.77
PTPRT-209ENST00000612229 ASH1LQ9NR48 2969 aaKnown RBP4.01□□□□□ -1.77
PTPRT-209ENST00000612229 PRO2289Q9P1D8 64 aa4.01□□□□□ -1.77
PTPRT-209ENST00000612229 FLNCQ14315 2725 aa4□□□□□ -1.77
PTPRT-209ENST00000612229 KRTAP1-5Q9BYS1 174 aa3.99□□□□□ -1.77
PTPRT-209ENST00000612229 WDFY4Q6ZS81 3184 aa3.98□□□□□ -1.77
PTPRT-209ENST00000612229 HIVEP1P15822 2718 aa3.98□□□□□ -1.77
PTPRT-209ENST00000612229 KRTAP11-1Q8IUC1 163 aa3.96□□□□□ -1.78
PTPRT-209ENST00000612229 MKI67P46013 3256 aaKnown RBP3.95□□□□□ -1.78
PTPRT-209ENST00000612229 RANBP2P49792 3224 aaKnown RBP3.95□□□□□ -1.78
PTPRT-209ENST00000612229 FREM2Q5SZK8 3169 aa3.95□□□□□ -1.78
PTPRT-209ENST00000612229 PRUNE2Q8WUY3 3088 aa3.94□□□□□ -1.78
PTPRT-209ENST00000612229 CELSR2Q9HCU4 2923 aa3.94□□□□□ -1.78
PTPRT-209ENST00000612229 A8MU10 97 aa3.94□□□□□ -1.78
PTPRT-209ENST00000612229 NIPBLQ6KC79 2804 aaeCLIP3.94□□□□□ -1.78
PTPRT-209ENST00000612229 KRTAP10-1P60331 282 aa3.93□□□□□ -1.78
PTPRT-209ENST00000612229 COL12A1Q99715 3063 aa3.92□□□□□ -1.78
PTPRT-209ENST00000612229 TENM1Q9UKZ4 2725 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 293.7 ms