RNA–Protein interactions for RNA: ENST00000610452.1

COL15A1-205, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL15A1, Length 5,422 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-205ENST00000610452 ITPR3Q14573 2671 aa12.42□□□□□ -0.42
COL15A1-205ENST00000610452 KRTAP16-1A8MUX0 517 aa12.4□□□□□ -0.42
COL15A1-205ENST00000610452 ROMO1P60602 79 aa12.39□□□□□ -0.43
COL15A1-205ENST00000610452 K7EIL1 84 aa12.39□□□□□ -0.43
COL15A1-205ENST00000610452 MAST4O15021 2626 aa12.37□□□□□ -0.43
COL15A1-205ENST00000610452 CHD6Q8TD26 2715 aa12.35□□□□□ -0.43
COL15A1-205ENST00000610452 MKI67P46013 3256 aaKnown RBP12.35□□□□□ -0.43
COL15A1-205ENST00000610452 SPRR1BP22528 89 aa12.34□□□□□ -0.43
COL15A1-205ENST00000610452 TNP2Q05952 138 aa12.33□□□□□ -0.44
COL15A1-205ENST00000610452 SPATA8Q6RVD6 105 aa12.33□□□□□ -0.44
COL15A1-205ENST00000610452 KRTAP1-3Q8IUG1 177 aa12.32□□□□□ -0.44
COL15A1-205ENST00000610452 MGAQ8IWI9 3026 aa12.32□□□□□ -0.44
COL15A1-205ENST00000610452 LINC00483Q53H64 154 aa12.32□□□□□ -0.44
COL15A1-205ENST00000610452 KRTAP29-1A8MX34 341 aaPredicted RBP12.31□□□□□ -0.44
COL15A1-205ENST00000610452 LAMA3Q16787 3333 aa12.29□□□□□ -0.44
COL15A1-205ENST00000610452 A8MU10 97 aa12.29□□□□□ -0.44
COL15A1-205ENST00000610452 Q6ZR54 194 aa12.29□□□□□ -0.44
COL15A1-205ENST00000610452 KRTAP26-1Q6PEX3 210 aa12.28□□□□□ -0.44
COL15A1-205ENST00000610452 RPL37P61927 97 aaKnown RBP12.28□□□□□ -0.44
COL15A1-205ENST00000610452 ADM2Q7Z4H4 148 aa12.26□□□□□ -0.45
COL15A1-205ENST00000610452 TRANK1O15050 2925 aa12.26□□□□□ -0.45
COL15A1-205ENST00000610452 KRTAP1-1Q07627 177 aa12.24□□□□□ -0.45
COL15A1-205ENST00000610452 COX6B2Q6YFQ2 88 aa12.23□□□□□ -0.45
COL15A1-205ENST00000610452 CAMK2N1Q7Z7J9 78 aa12.23□□□□□ -0.45
COL15A1-205ENST00000610452 KRTAP25-1Q3LHN0 102 aa12.21□□□□□ -0.45
COL15A1-205ENST00000610452 H1FX-AS1Q4G0G2 97 aa12.21□□□□□ -0.45
COL15A1-205ENST00000610452 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.2□□□□□ -0.46
COL15A1-205ENST00000610452 WDFY4Q6ZS81 3184 aa12.2□□□□□ -0.46
COL15A1-205ENST00000610452 CFAP46Q8IYW2 2715 aa12.2□□□□□ -0.46
COL15A1-205ENST00000610452 LCE6AA0A183 80 aa12.2□□□□□ -0.46
COL15A1-205ENST00000610452 BRCA2P51587 3418 aa12.19□□□□□ -0.46
COL15A1-205ENST00000610452 TRIOO75962 3097 aa12.15□□□□□ -0.46
COL15A1-205ENST00000610452 MAP1AP78559 2803 aaPredicted RBP12.13□□□□□ -0.47
COL15A1-205ENST00000610452 GCN1Q92616 2671 aaKnown RBP12.13□□□□□ -0.47
COL15A1-205ENST00000610452 SMR3BP02814 79 aaPredicted RBP12.12□□□□□ -0.47
COL15A1-205ENST00000610452 UNC80Q8N2C7 3258 aa12.11□□□□□ -0.47
COL15A1-205ENST00000610452 UNC79Q9P2D8 2635 aa12.1□□□□□ -0.47
COL15A1-205ENST00000610452 WWC2-AS2Q96NR7 200 aa12.1□□□□□ -0.47
COL15A1-205ENST00000610452 HELZ2Q9BYK8 2649 aaKnown RBP12.09□□□□□ -0.47
COL15A1-205ENST00000610452 VPS13AQ96RL7 3174 aa12.07□□□□□ -0.48
COL15A1-205ENST00000610452 S4R3F8 94 aa12.06□□□□□ -0.48
COL15A1-205ENST00000610452 KRTAP4-16G5E9R7 235 aaPredicted RBP12.06□□□□□ -0.48
COL15A1-205ENST00000610452 FREM2Q5SZK8 3169 aa12.05□□□□□ -0.48
COL15A1-205ENST00000610452 FRYQ5TBA9 3013 aa12.05□□□□□ -0.48
COL15A1-205ENST00000610452 NDUFAF8A1L188 74 aa12.04□□□□□ -0.48
COL15A1-205ENST00000610452 PRUNE2Q8WUY3 3088 aa12.03□□□□□ -0.48
COL15A1-205ENST00000610452 XIRP2A4UGR9 3374 aa12.02□□□□□ -0.49
COL15A1-205ENST00000610452 ZNF292O60281 2723 aa12□□□□□ -0.49
COL15A1-205ENST00000610452 NOTCH1P46531 2555 aa11.99□□□□□ -0.49
COL15A1-205ENST00000610452 NBEAL1Q6ZS30 2694 aa11.98□□□□□ -0.49
COL15A1-205ENST00000610452 PLAC8Q9NZF1 115 aa11.97□□□□□ -0.49
COL15A1-205ENST00000610452 NBEAL2Q6ZNJ1 2754 aa11.97□□□□□ -0.49
COL15A1-205ENST00000610452 TEX15Q9BXT5 2789 aa11.96□□□□□ -0.5
COL15A1-205ENST00000610452 DSPP15924 2871 aaKnown RBP11.95□□□□□ -0.5
COL15A1-205ENST00000610452 FLG2Q5D862 2391 aaPredicted RBP11.92□□□□□ -0.5
COL15A1-205ENST00000610452 STAB1Q9NY15 2570 aa11.92□□□□□ -0.5
COL15A1-205ENST00000610452 Q6ZSA8 131 aa11.92□□□□□ -0.5
COL15A1-205ENST00000610452 A0A087X002 238 aa11.92□□□□□ -0.5
COL15A1-205ENST00000610452 NBEAQ8NFP9 2946 aa11.9□□□□□ -0.5
COL15A1-205ENST00000610452 R4GN34 69 aa11.89□□□□□ -0.51
COL15A1-205ENST00000610452 DMBT1Q9UGM3 2413 aaPredicted RBP11.89□□□□□ -0.51
COL15A1-205ENST00000610452 PANO1I0J062 215 aa11.87□□□□□ -0.51
COL15A1-205ENST00000610452 NOTCH2NLQ7Z3S9 236 aa11.86□□□□□ -0.51
COL15A1-205ENST00000610452 CELSR3Q9NYQ7 3312 aa11.83□□□□□ -0.52
COL15A1-205ENST00000610452 TEP1Q99973 2627 aaKnown RBP11.82□□□□□ -0.52
COL15A1-205ENST00000610452 J3QL48 77 aa11.8□□□□□ -0.52
COL15A1-205ENST00000610452 COL6A5A8TX70 2615 aa11.79□□□□□ -0.52
COL15A1-205ENST00000610452 KALRNO60229 2985 aa11.79□□□□□ -0.52
COL15A1-205ENST00000610452 A8MUU9 505 aa11.73□□□□□ -0.53
COL15A1-205ENST00000610452 KRTAP1-5Q9BYS1 174 aa11.73□□□□□ -0.53
COL15A1-205ENST00000610452 UBR5O95071 2799 aaPredicted RBP11.72□□□□□ -0.53
COL15A1-205ENST00000610452 CDH23Q9H251 3354 aa11.71□□□□□ -0.53
COL15A1-205ENST00000610452 M0QZ58 72 aa11.71□□□□□ -0.54
COL15A1-205ENST00000610452 SETXQ7Z333 2677 aaKnown RBP11.7□□□□□ -0.54
COL15A1-205ENST00000610452 LAMA1P25391 3075 aa11.65□□□□□ -0.54
COL15A1-205ENST00000610452 KRTAP11-1Q8IUC1 163 aa11.63□□□□□ -0.55
COL15A1-205ENST00000610452 VCANP13611 3396 aa11.63□□□□□ -0.55
COL15A1-205ENST00000610452 DNAH14Q0VDD8 3507 aa11.57□□□□□ -0.56
COL15A1-205ENST00000610452 PLAC4Q8WY50 150 aa11.57□□□□□ -0.56
COL15A1-205ENST00000610452 ITPR1Q14643 2758 aa11.55□□□□□ -0.56
COL15A1-205ENST00000610452 ADGRG4Q8IZF6 3080 aa11.55□□□□□ -0.56
COL15A1-205ENST00000610452 C20orf166-AS1Q96NR2 134 aa11.54□□□□□ -0.56
COL15A1-205ENST00000610452 DMXL2Q8TDJ6 3036 aa11.54□□□□□ -0.56
COL15A1-205ENST00000610452 BAHCC1Q9P281 2608 aa11.52□□□□□ -0.57
COL15A1-205ENST00000610452 STAB2Q8WWQ8 2551 aa11.51□□□□□ -0.57
COL15A1-205ENST00000610452 IGSF10Q6WRI0 2623 aa11.51□□□□□ -0.57
COL15A1-205ENST00000610452 ASH1LQ9NR48 2969 aaKnown RBP11.51□□□□□ -0.57
COL15A1-205ENST00000610452 KRTAP7-1Q8IUC3 87 aa11.5□□□□□ -0.57
COL15A1-205ENST00000610452 TACC2O95359 2948 aa11.48□□□□□ -0.57
COL15A1-205ENST00000610452 ATMQ13315 3056 aa11.47□□□□□ -0.57
COL15A1-205ENST00000610452 NSD1Q96L73 2696 aaPredicted RBP11.44□□□□□ -0.58
COL15A1-205ENST00000610452 FRYLO94915 3013 aa11.43□□□□□ -0.58
COL15A1-205ENST00000610452 BOD1L1Q8NFC6 3051 aa11.43□□□□□ -0.58
COL15A1-205ENST00000610452 SZT2Q5T011 3432 aa11.4□□□□□ -0.58
COL15A1-205ENST00000610452 LRBAP50851 2863 aa11.39□□□□□ -0.59
COL15A1-205ENST00000610452 FLNCQ14315 2725 aa11.39□□□□□ -0.59
COL15A1-205ENST00000610452 COL12A1Q99715 3063 aa11.33□□□□□ -0.6
COL15A1-205ENST00000610452 M0R2T5 61 aa11.31□□□□□ -0.6
COL15A1-205ENST00000610452 SEC61BP60468 96 aaKnown RBP11.3□□□□□ -0.6
COL15A1-205ENST00000610452 KRTAP10-1P60331 282 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms