RNA–Protein interactions for RNA: ENST00000606769.1

SNORA28-201, Transcript of small nucleolar RNA, H/ACA box 28, humanhuman

BASIC

Gene SNORA28, Length 126 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA28-201ENST00000606769 LTN1O94822 1766 aa-0.97□□□□□ -2.56
SNORA28-201ENST00000606769 RPL38P63173 70 aaKnown RBP-0.97□□□□□ -2.56
SNORA28-201ENST00000606769 BIRC6Q9NR09 4857 aa-0.97□□□□□ -2.56
SNORA28-201ENST00000606769 DNAH1Q9P2D7 4330 aa-0.97□□□□□ -2.57
SNORA28-201ENST00000606769 WDR87Q6ZQQ6 2873 aa-0.98□□□□□ -2.57
SNORA28-201ENST00000606769 AKAP12Q02952 1782 aa-0.98□□□□□ -2.57
SNORA28-201ENST00000606769 LRRK2Q5S007 2527 aa-0.98□□□□□ -2.57
SNORA28-201ENST00000606769 LCE6AA0A183 80 aa-0.98□□□□□ -2.57
SNORA28-201ENST00000606769 MYMXA0A1B0GTQ4 84 aa-0.98□□□□□ -2.57
SNORA28-201ENST00000606769 GYPAP02724 150 aa-0.98□□□□□ -2.57
SNORA28-201ENST00000606769 C3orf79P0CE67 100 aa-0.98□□□□□ -2.57
SNORA28-201ENST00000606769 KRTAP19-5Q3LI72 72 aa-0.98□□□□□ -2.57
SNORA28-201ENST00000606769 S4R3F8 94 aa-0.98□□□□□ -2.57
SNORA28-201ENST00000606769 TRIOO75962 3097 aa-0.98□□□□□ -2.57
SNORA28-201ENST00000606769 NCOA2Q15596 1464 aa-0.99□□□□□ -2.57
SNORA28-201ENST00000606769 FAM186AA6NE01 2351 aa-0.99□□□□□ -2.57
SNORA28-201ENST00000606769 UTP20O75691 2785 aaKnown RBP-0.99□□□□□ -2.57
SNORA28-201ENST00000606769 PRLHP81277 87 aa-0.99□□□□□ -2.57
SNORA28-201ENST00000606769 PEA15Q15121 130 aa-0.99□□□□□ -2.57
SNORA28-201ENST00000606769 WFDC9Q8NEX5 89 aa-0.99□□□□□ -2.57
SNORA28-201ENST00000606769 NBEAQ8NFP9 2946 aa-0.99□□□□□ -2.57
SNORA28-201ENST00000606769 DOPEY1Q5JWR5 2465 aa-0.99□□□□□ -2.57
SNORA28-201ENST00000606769 DIP2BQ9P265 1576 aa-1□□□□□ -2.57
SNORA28-201ENST00000606769 DEPDC5O75140 1603 aa-1□□□□□ -2.57
SNORA28-201ENST00000606769 SACSQ9NZJ4 4579 aa-1□□□□□ -2.57
SNORA28-201ENST00000606769 A0A0C4DFX4 3053 aa-1□□□□□ -2.57
SNORA28-201ENST00000606769 MT1HP80294 61 aa-1□□□□□ -2.57
SNORA28-201ENST00000606769 ACACBO00763 2458 aa-1□□□□□ -2.57
SNORA28-201ENST00000606769 CCDC168Q8NDH2 2452 aa-1□□□□□ -2.57
SNORA28-201ENST00000606769 LYNX1G3V0Z9 82 aa-1.01□□□□□ -2.57
SNORA28-201ENST00000606769 CYB5AP00167 134 aa-1.01□□□□□ -2.57
SNORA28-201ENST00000606769 DEFB130BP0DP73 79 aa-1.01□□□□□ -2.57
SNORA28-201ENST00000606769 DEFB130AP0DP74 79 aa-1.01□□□□□ -2.57
SNORA28-201ENST00000606769 SMIM11AP58511 58 aa-1.01□□□□□ -2.57
SNORA28-201ENST00000606769 PKIAP61925 76 aa-1.01□□□□□ -2.57
SNORA28-201ENST00000606769 DEFA5Q01523 94 aa-1.01□□□□□ -2.57
SNORA28-201ENST00000606769 DNAH8Q96JB1 4490 aa-1.01□□□□□ -2.57
SNORA28-201ENST00000606769 PLECQ15149 4684 aaKnown RBP-1.01□□□□□ -2.57
SNORA28-201ENST00000606769 LAMA2P24043 3122 aaKnown RBP-1.01□□□□□ -2.57
SNORA28-201ENST00000606769 PKD1L2Q7Z442 2459 aa-1.01□□□□□ -2.57
SNORA28-201ENST00000606769 NBEAL2Q6ZNJ1 2754 aa-1.02□□□□□ -2.57
SNORA28-201ENST00000606769 RANBP2P49792 3224 aaKnown RBP-1.02□□□□□ -2.57
SNORA28-201ENST00000606769 CEP290O15078 2479 aa-1.02□□□□□ -2.57
SNORA28-201ENST00000606769 RABAC1Q9UI14 185 aa-1.02□□□□□ -2.57
SNORA28-201ENST00000606769 MAGI3Q5TCQ9 1506 aa-1.03□□□□□ -2.57
SNORA28-201ENST00000606769 TEX15Q9BXT5 2789 aa-1.03□□□□□ -2.57
SNORA28-201ENST00000606769 ARFGEF2Q9Y6D5 1785 aa-1.03□□□□□ -2.58
SNORA28-201ENST00000606769 PLIN4Q96Q06 1357 aa-1.04□□□□□ -2.58
SNORA28-201ENST00000606769 CEBPZOSA8MTT3 80 aa-1.04□□□□□ -2.58
SNORA28-201ENST00000606769 K7EP34 96 aa-1.04□□□□□ -2.58
SNORA28-201ENST00000606769 S100A8P05109 93 aa-1.04□□□□□ -2.58
SNORA28-201ENST00000606769 ACYP1P07311 99 aa-1.04□□□□□ -2.58
SNORA28-201ENST00000606769 DEFB110Q30KQ9 67 aa-1.04□□□□□ -2.58
SNORA28-201ENST00000606769 PYY3Q5JQD4 70 aa-1.04□□□□□ -2.58
SNORA28-201ENST00000606769 LINC00643Q86TS7 51 aa-1.04□□□□□ -2.58
SNORA28-201ENST00000606769 RELNP78509 3460 aa-1.04□□□□□ -2.58
SNORA28-201ENST00000606769 CMYA5Q8N3K9 4069 aa-1.05□□□□□ -2.58
SNORA28-201ENST00000606769 IFI6P09912 130 aa-1.05□□□□□ -2.58
SNORA28-201ENST00000606769 IAPPP10997 89 aa-1.05□□□□□ -2.58
SNORA28-201ENST00000606769 SNRPFP62306 86 aaKnown RBP-1.05□□□□□ -2.58
SNORA28-201ENST00000606769 URB2Q14146 1524 aaKnown RBP-1.05□□□□□ -2.58
SNORA28-201ENST00000606769 RYR3Q15413 4870 aa-1.05□□□□□ -2.58
SNORA28-201ENST00000606769 RNF213Q63HN8 5207 aa-1.06□□□□□ -2.58
SNORA28-201ENST00000606769 PIK3C2BO00750 1634 aa-1.06□□□□□ -2.58
SNORA28-201ENST00000606769 TDRG1Q3Y452 100 aa-1.06□□□□□ -2.58
SNORA28-201ENST00000606769 S100A16Q96FQ6 103 aaKnown RBP-1.06□□□□□ -2.58
SNORA28-201ENST00000606769 PLCH1Q4KWH8 1693 aa-1.07□□□□□ -2.58
SNORA28-201ENST00000606769 KIF14Q15058 1648 aa-1.07□□□□□ -2.58
SNORA28-201ENST00000606769 NDUFB1O75438 58 aa-1.07□□□□□ -2.58
SNORA28-201ENST00000606769 DEFB106AQ8N104 65 aa-1.07□□□□□ -2.58
SNORA28-201ENST00000606769 DDX60LQ5H9U9 1706 aaKnown RBP-1.07□□□□□ -2.58
SNORA28-201ENST00000606769 ABCC3O15438 1527 aa-1.08□□□□□ -2.58
SNORA28-201ENST00000606769 UMAD1C9J7I0 102 aa-1.08□□□□□ -2.58
SNORA28-201ENST00000606769 NDUFA4O00483 81 aa-1.08□□□□□ -2.58
SNORA28-201ENST00000606769 CCDC88BA6NC98 1476 aa-1.08□□□□□ -2.58
SNORA28-201ENST00000606769 KIAA1109Q2LD37 5005 aa-1.08□□□□□ -2.58
SNORA28-201ENST00000606769 CCNB3Q8WWL7 1395 aa-1.08□□□□□ -2.58
SNORA28-201ENST00000606769 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-1.09□□□□□ -2.58
SNORA28-201ENST00000606769 NIPBLQ6KC79 2804 aaeCLIP-1.09□□□□□ -2.58not detected■■■□□ 15.3
SNORA28-201ENST00000606769 MAP3K4Q9Y6R4 1608 aa-1.09□□□□□ -2.58
SNORA28-201ENST00000606769 RYR2Q92736 4967 aa-1.09□□□□□ -2.58
SNORA28-201ENST00000606769 DNHD1Q96M86 4753 aa-1.09□□□□□ -2.58
SNORA28-201ENST00000606769 COL12A1Q99715 3063 aa-1.1□□□□□ -2.59
SNORA28-201ENST00000606769 PPLO60437 1756 aa-1.1□□□□□ -2.59
SNORA28-201ENST00000606769 SMR3BP02814 79 aaPredicted RBP-1.1□□□□□ -2.59
SNORA28-201ENST00000606769 HMGA1P17096 107 aaKnown RBP-1.1□□□□□ -2.59
SNORA28-201ENST00000606769 IFI27P40305 119 aaPredicted RBP-1.1□□□□□ -2.59
SNORA28-201ENST00000606769 DEFB1P60022 68 aa-1.1□□□□□ -2.59
SNORA28-201ENST00000606769 C5orf42Q9H799 3197 aa-1.11□□□□□ -2.59
SNORA28-201ENST00000606769 DYNC2H1Q8NCM8 4307 aaKnown RBP-1.11□□□□□ -2.59
SNORA28-201ENST00000606769 TJP1Q07157 1748 aa-1.11□□□□□ -2.59
SNORA28-201ENST00000606769 ITSN1Q15811 1721 aa-1.11□□□□□ -2.59
SNORA28-201ENST00000606769 RICTORQ6R327 1708 aa-1.11□□□□□ -2.59
SNORA28-201ENST00000606769 TTC37Q6PGP7 1564 aa-1.11□□□□□ -2.59
SNORA28-201ENST00000606769 NREPQ16612 68 aa-1.11□□□□□ -2.59
SNORA28-201ENST00000606769 ZC3H13Q5T200 1668 aaKnown RBP-1.11□□□□□ -2.59
SNORA28-201ENST00000606769 ITSN2Q9NZM3 1697 aa-1.11□□□□□ -2.59
SNORA28-201ENST00000606769 ANKRD36CQ5JPF3 1778 aa-1.11□□□□□ -2.59
SNORA28-201ENST00000606769 PVALEFA0A1B0GWK0 134 aa-1.12□□□□□ -2.59
SNORA28-201ENST00000606769 V9GYS6 101 aa-1.12□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms