RNA–Protein interactions for RNA: ENST00000598969.5

COPE-208, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 5

Gene COPE, Length 1,770 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-208ENST00000598969 LINC01547P58512 204 aaPredicted RBP12.74□□□□□ -0.37
COPE-208ENST00000598969 ZNF861PO60384 105 aa12.74□□□□□ -0.37
COPE-208ENST00000598969 KRTAP10-4P60372 401 aaPredicted RBP12.74□□□□□ -0.37
COPE-208ENST00000598969 DSCR8Q96T75 97 aa12.71□□□□□ -0.37
COPE-208ENST00000598969 VPS25Q9BRG1 176 aa12.71□□□□□ -0.37
COPE-208ENST00000598969 KRTAP17-1Q9BYP8 105 aa12.71□□□□□ -0.37
COPE-208ENST00000598969 FAM240AA0A1B0GVK7 77 aa12.71□□□□□ -0.38
COPE-208ENST00000598969 ACYP1P07311 99 aa12.7□□□□□ -0.38
COPE-208ENST00000598969 GAGE2AQ6NT46 116 aa12.69□□□□□ -0.38
COPE-208ENST00000598969 PDE6GP18545 87 aa12.69□□□□□ -0.38
COPE-208ENST00000598969 LOC110117498A0A087WWA1 95 aa12.66□□□□□ -0.38
COPE-208ENST00000598969 CCKP06307 115 aa12.66□□□□□ -0.38
COPE-208ENST00000598969 FAM229AH3BQW9 127 aa12.66□□□□□ -0.38
COPE-208ENST00000598969 SRRM2Q9UQ35 2752 aaKnown RBP12.65□□□□□ -0.38
COPE-208ENST00000598969 C21orf62-AS1Q17RA5 79 aa12.64□□□□□ -0.39
COPE-208ENST00000598969 Q5VSD8 79 aa12.64□□□□□ -0.39
COPE-208ENST00000598969 Q6ZQT0 140 aa12.64□□□□□ -0.39
COPE-208ENST00000598969 TRBV7-4A0A0J9YYF1 115 aa12.63□□□□□ -0.39
COPE-208ENST00000598969 PLA2G1BP04054 148 aaKnown RBP12.63□□□□□ -0.39
COPE-208ENST00000598969 C3orf22Q8N5N4 141 aa12.63□□□□□ -0.39
COPE-208ENST00000598969 F8WEM9 126 aa12.62□□□□□ -0.39
COPE-208ENST00000598969 Q8N1X5 172 aa12.61□□□□□ -0.39
COPE-208ENST00000598969 SPRR1BP22528 89 aa12.61□□□□□ -0.39
COPE-208ENST00000598969 ZNF706Q9Y5V0 76 aaPredicted RBP12.61□□□□□ -0.39
COPE-208ENST00000598969 SMIM29Q86T20 159 aa12.6□□□□□ -0.39
COPE-208ENST00000598969 CDIP1Q9H305 208 aa12.59□□□□□ -0.39
COPE-208ENST00000598969 SPINK6Q6UWN8 80 aa12.58□□□□□ -0.4
COPE-208ENST00000598969 PKHD1L1Q86WI1 4243 aa12.57□□□□□ -0.4
COPE-208ENST00000598969 SPRR4Q96PI1 79 aa12.57□□□□□ -0.4
COPE-208ENST00000598969 IGLV8-61A0A075B6I0 122 aa12.51□□□□□ -0.41
COPE-208ENST00000598969 LINC00483Q53H64 154 aa12.51□□□□□ -0.41
COPE-208ENST00000598969 LINC00846Q9NV44 126 aa12.51□□□□□ -0.41
COPE-208ENST00000598969 ANAPC11Q9NYG5 84 aa12.51□□□□□ -0.41
COPE-208ENST00000598969 HERC2O95714 4834 aa12.5□□□□□ -0.41
COPE-208ENST00000598969 SIGMAR1Q99720 223 aa12.5□□□□□ -0.41
COPE-208ENST00000598969 KRTAP1-4P0C5Y4 121 aa12.48□□□□□ -0.41
COPE-208ENST00000598969 A0A1B0GW54 56 aa12.46□□□□□ -0.41
COPE-208ENST00000598969 Q6JHZ5 121 aa12.46□□□□□ -0.41
COPE-208ENST00000598969 LINC00643Q86TS7 51 aa12.46□□□□□ -0.42
COPE-208ENST00000598969 UBL5Q9BZL1 73 aa12.46□□□□□ -0.42
COPE-208ENST00000598969 KRTAP4-5Q9BYR2 181 aa12.45□□□□□ -0.42
COPE-208ENST00000598969 IGFL1Q6UW32 110 aa12.44□□□□□ -0.42
COPE-208ENST00000598969 Q8NBF4 154 aa12.43□□□□□ -0.42
COPE-208ENST00000598969 IGLV9-49A0A0B4J1Y8 123 aa12.41□□□□□ -0.42
COPE-208ENST00000598969 A0A1W2PNM2 257 aa12.41□□□□□ -0.42
COPE-208ENST00000598969 MT-ATP8P03928 68 aa12.41□□□□□ -0.42
COPE-208ENST00000598969 C9orf153Q5TBE3 101 aa12.4□□□□□ -0.42
COPE-208ENST00000598969 A0A087X002 238 aa12.39□□□□□ -0.43
COPE-208ENST00000598969 FAM229BQ4G0N7 80 aa12.39□□□□□ -0.43
COPE-208ENST00000598969 CRYGAP11844 174 aa12.37□□□□□ -0.43
COPE-208ENST00000598969 KRTAP13-2Q52LG2 175 aa12.35□□□□□ -0.43
COPE-208ENST00000598969 Q6ZVQ6 151 aa12.35□□□□□ -0.43
COPE-208ENST00000598969 A0A0G2JQZ4 141 aa12.34□□□□□ -0.43
COPE-208ENST00000598969 MOBPQ13875 183 aa12.33□□□□□ -0.44
COPE-208ENST00000598969 NREPQ16612 68 aa12.33□□□□□ -0.44
COPE-208ENST00000598969 ATP5EP2Q5VTU8 51 aa12.32□□□□□ -0.44
COPE-208ENST00000598969 Q6Q795 121 aa12.32□□□□□ -0.44
COPE-208ENST00000598969 PRR26Q8N8Z3 221 aa12.31□□□□□ -0.44
COPE-208ENST00000598969 ABCA13Q86UQ4 5058 aa12.3□□□□□ -0.44
COPE-208ENST00000598969 FAT3Q8TDW7 4589 aa12.29□□□□□ -0.44
COPE-208ENST00000598969 IMUPQ9GZP8 106 aa12.29□□□□□ -0.44
COPE-208ENST00000598969 LRP1Q07954 4544 aaKnown RBP12.29□□□□□ -0.44
COPE-208ENST00000598969 TRBV7-7A0A0K0K1E9 115 aa12.28□□□□□ -0.44
COPE-208ENST00000598969 FLG2Q5D862 2391 aaPredicted RBP12.27□□□□□ -0.44
COPE-208ENST00000598969 IGKV3D-7A0A0C4DH55 119 aa12.27□□□□□ -0.45
COPE-208ENST00000598969 A0A087WSZ3 146 aa12.25□□□□□ -0.45
COPE-208ENST00000598969 SSBP3-AS1Q7Z2R9 100 aa12.25□□□□□ -0.45
COPE-208ENST00000598969 CXCL6P80162 114 aa12.24□□□□□ -0.45
COPE-208ENST00000598969 TYMSOSQ8TAI1 123 aa12.23□□□□□ -0.45
COPE-208ENST00000598969 MYCBP2O75592 4640 aa12.22□□□□□ -0.45
COPE-208ENST00000598969 SCGB1A1P11684 91 aa12.21□□□□□ -0.45
COPE-208ENST00000598969 BPY2O14599 106 aa12.19□□□□□ -0.46
COPE-208ENST00000598969 KRTAP10-8P60410 259 aa12.19□□□□□ -0.46
COPE-208ENST00000598969 TNXBP22105 4242 aa12.19□□□□□ -0.46
COPE-208ENST00000598969 HRCT1Q6UXD1 115 aa12.18□□□□□ -0.46
COPE-208ENST00000598969 HIST1H4AP62805 103 aaKnown RBP12.17□□□□□ -0.46
COPE-208ENST00000598969 CD164Q04900 197 aa12.15□□□□□ -0.46
COPE-208ENST00000598969 SS18L2Q9UHA2 77 aa12.15□□□□□ -0.46
COPE-208ENST00000598969 OXTP01178 125 aa12.14□□□□□ -0.47
COPE-208ENST00000598969 MT1HL1P0DM35 61 aa12.13□□□□□ -0.47
COPE-208ENST00000598969 KRTAP29-1A8MX34 341 aaPredicted RBP12.1□□□□□ -0.47
COPE-208ENST00000598969 LINC00304Q8N9R0 145 aa12.09□□□□□ -0.47
COPE-208ENST00000598969 A0A087WVE0 104 aa12.07□□□□□ -0.48
COPE-208ENST00000598969 LINC00472Q9H8W2 130 aa12.07□□□□□ -0.48
COPE-208ENST00000598969 FAM236AA0A1B0GUQ0 79 aa12.05□□□□□ -0.48
COPE-208ENST00000598969 FAM236BA0A1B0GV22 79 aa12.05□□□□□ -0.48
COPE-208ENST00000598969 DEFB116Q30KQ4 102 aa12.05□□□□□ -0.48
COPE-208ENST00000598969 J3KT08 172 aa12.04□□□□□ -0.48
COPE-208ENST00000598969 C4orf48Q5BLP8 95 aa12.04□□□□□ -0.48
COPE-208ENST00000598969 SPAG11AQ6PDA7 123 aa12.03□□□□□ -0.48
COPE-208ENST00000598969 PCLOQ9Y6V0 5065 aa12.03□□□□□ -0.48
COPE-208ENST00000598969 DSCR10P59022 87 aa12.02□□□□□ -0.48
COPE-208ENST00000598969 SPINK1P00995 79 aa12.02□□□□□ -0.49
COPE-208ENST00000598969 Q8N9L7 120 aa12.02□□□□□ -0.49
COPE-208ENST00000598969 IGKV4-1P06312 121 aa12.01□□□□□ -0.49
COPE-208ENST00000598969 PCP4P48539 62 aa11.97□□□□□ -0.49
COPE-208ENST00000598969 Q96NJ1 140 aa11.97□□□□□ -0.49
COPE-208ENST00000598969 LIMD2Q9BT23 127 aa11.97□□□□□ -0.49
COPE-208ENST00000598969 K7EQZ3 153 aa11.97□□□□□ -0.49
COPE-208ENST00000598969 ASB16-AS1Q495Z4 193 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms