RNA–Protein interactions for RNA: ENST00000596788.1

IRF3-214, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-214ENST00000596788 FAM229BQ4G0N7 80 aa12.39□□□□□ -0.43
IRF3-214ENST00000596788 GTF2H5Q6ZYL4 71 aa12.39□□□□□ -0.43
IRF3-214ENST00000596788 BAALC-AS2P0C853 105 aa12.37□□□□□ -0.43
IRF3-214ENST00000596788 ABCA13Q86UQ4 5058 aa12.36□□□□□ -0.43
IRF3-214ENST00000596788 GHRHP01286 108 aa12.36□□□□□ -0.43
IRF3-214ENST00000596788 H3BQ85 93 aa12.35□□□□□ -0.43
IRF3-214ENST00000596788 TMEM256-PLSCR3K7ERE1 68 aa12.34□□□□□ -0.43
IRF3-214ENST00000596788 KRTAP13-2Q52LG2 175 aa12.34□□□□□ -0.43
IRF3-214ENST00000596788 PRR26Q8N8Z3 221 aa12.34□□□□□ -0.43
IRF3-214ENST00000596788 LAMTOR3Q9UHA4 124 aa12.34□□□□□ -0.43
IRF3-214ENST00000596788 FLG2Q5D862 2391 aaPredicted RBP12.33□□□□□ -0.44
IRF3-214ENST00000596788 CRYGAP11844 174 aa12.33□□□□□ -0.44
IRF3-214ENST00000596788 PRO0461Q9UI25 63 aa12.33□□□□□ -0.44
IRF3-214ENST00000596788 IGLV9-49A0A0B4J1Y8 123 aa12.32□□□□□ -0.44
IRF3-214ENST00000596788 H3BT86 120 aa12.32□□□□□ -0.44
IRF3-214ENST00000596788 FAT3Q8TDW7 4589 aa12.32□□□□□ -0.44
IRF3-214ENST00000596788 NDUFV3P56181 108 aaKnown RBP12.31□□□□□ -0.44
IRF3-214ENST00000596788 UBE2V1Q13404 147 aa12.31□□□□□ -0.44
IRF3-214ENST00000596788 LINC01600Q96MT4 127 aa12.31□□□□□ -0.44
IRF3-214ENST00000596788 SMCPP49901 116 aaPredicted RBP12.3□□□□□ -0.44
IRF3-214ENST00000596788 MOBPQ13875 183 aa12.3□□□□□ -0.44
IRF3-214ENST00000596788 C9orf153Q5TBE3 101 aa12.29□□□□□ -0.44
IRF3-214ENST00000596788 LRP1Q07954 4544 aaKnown RBP12.29□□□□□ -0.44
IRF3-214ENST00000596788 F8WEM9 126 aa12.28□□□□□ -0.44
IRF3-214ENST00000596788 ANKRD29Q8N6D5 301 aa12.28□□□□□ -0.44
IRF3-214ENST00000596788 A0A1B0GV72 72 aa12.27□□□□□ -0.45
IRF3-214ENST00000596788 Q8NBF4 154 aa12.27□□□□□ -0.45
IRF3-214ENST00000596788 MYCBP2O75592 4640 aa12.25□□□□□ -0.45
IRF3-214ENST00000596788 IGLV8-61A0A075B6I0 122 aa12.24□□□□□ -0.45
IRF3-214ENST00000596788 TYMSOSQ8TAI1 123 aa12.24□□□□□ -0.45
IRF3-214ENST00000596788 OXTP01178 125 aa12.22□□□□□ -0.45
IRF3-214ENST00000596788 KRTAP10-8P60410 259 aa12.21□□□□□ -0.45
IRF3-214ENST00000596788 A0A0G2JQZ4 141 aa12.2□□□□□ -0.46
IRF3-214ENST00000596788 F8W1H4 67 aa12.2□□□□□ -0.46
IRF3-214ENST00000596788 MT1HL1P0DM35 61 aa12.2□□□□□ -0.46
IRF3-214ENST00000596788 KRTAP29-1A8MX34 341 aaPredicted RBP12.19□□□□□ -0.46
IRF3-214ENST00000596788 SSBP3-AS1Q7Z2R9 100 aa12.19□□□□□ -0.46
IRF3-214ENST00000596788 TNXBP22105 4242 aa12.18□□□□□ -0.46
IRF3-214ENST00000596788 IGFL1Q6UW32 110 aa12.18□□□□□ -0.46
IRF3-214ENST00000596788 OBSCN-AS1Q96MR7 158 aa12.18□□□□□ -0.46
IRF3-214ENST00000596788 Q6JHZ5 121 aa12.17□□□□□ -0.46
IRF3-214ENST00000596788 JMJD7-PLA2G4BH0Y9G9 81 aa12.15□□□□□ -0.46
IRF3-214ENST00000596788 RBM3P98179 157 aaKnown RBP12.15□□□□□ -0.46
IRF3-214ENST00000596788 TRBV7-4A0A0J9YYF1 115 aa12.13□□□□□ -0.47
IRF3-214ENST00000596788 C14orf132Q9NPU4 83 aa12.12□□□□□ -0.47
IRF3-214ENST00000596788 PCLOQ9Y6V0 5065 aa12.11□□□□□ -0.47
IRF3-214ENST00000596788 TEN1Q86WV5 123 aa12.11□□□□□ -0.47
IRF3-214ENST00000596788 LINC00304Q8N9R0 145 aa12.11□□□□□ -0.47
IRF3-214ENST00000596788 ETDBQ3ZM63 59 aa12.1□□□□□ -0.47
IRF3-214ENST00000596788 DSCR8Q96T75 97 aa12.1□□□□□ -0.47
IRF3-214ENST00000596788 LOC110117498A0A087WWA1 95 aa12.08□□□□□ -0.48
IRF3-214ENST00000596788 A0A1W2PNM2 257 aa12.07□□□□□ -0.48
IRF3-214ENST00000596788 HRCT1Q6UXD1 115 aa12.07□□□□□ -0.48
IRF3-214ENST00000596788 Q6ZQT0 140 aa12.06□□□□□ -0.48
IRF3-214ENST00000596788 CD164Q04900 197 aa12.05□□□□□ -0.48
IRF3-214ENST00000596788 J3QL48 77 aa12.04□□□□□ -0.48
IRF3-214ENST00000596788 CCKP06307 115 aa12.04□□□□□ -0.48
IRF3-214ENST00000596788 C4orf48Q5BLP8 95 aa12.03□□□□□ -0.48
IRF3-214ENST00000596788 SPAG11AQ6PDA7 123 aa12.02□□□□□ -0.49
IRF3-214ENST00000596788 Q6Q795 121 aa12.02□□□□□ -0.49
IRF3-214ENST00000596788 TRBV7-7A0A0K0K1E9 115 aa12.01□□□□□ -0.49
IRF3-214ENST00000596788 PDE6GP18545 87 aa12.01□□□□□ -0.49
IRF3-214ENST00000596788 VPS25Q9BRG1 176 aa12.01□□□□□ -0.49
IRF3-214ENST00000596788 SPINK1P00995 79 aa12□□□□□ -0.49
IRF3-214ENST00000596788 RPS29P62273 56 aaKnown RBP11.96□□□□□ -0.49
IRF3-214ENST00000596788 A0A087WSZ3 146 aa11.94□□□□□ -0.5
IRF3-214ENST00000596788 C21orf62-AS1Q17RA5 79 aa11.93□□□□□ -0.5
IRF3-214ENST00000596788 LIMD2Q9BT23 127 aa11.92□□□□□ -0.5
IRF3-214ENST00000596788 DMBT1Q9UGM3 2413 aaPredicted RBP11.92□□□□□ -0.5
IRF3-214ENST00000596788 Q5XG85 94 aa11.9□□□□□ -0.5
IRF3-214ENST00000596788 A0A1B0GW54 56 aa11.86□□□□□ -0.51
IRF3-214ENST00000596788 SS18L2Q9UHA2 77 aa11.86□□□□□ -0.51
IRF3-214ENST00000596788 ASB16-AS1Q495Z4 193 aa11.84□□□□□ -0.51
IRF3-214ENST00000596788 RETNLBQ9BQ08 111 aa11.83□□□□□ -0.52
IRF3-214ENST00000596788 C1orf195Q5TG92 126 aa11.79□□□□□ -0.52
IRF3-214ENST00000596788 Q96NJ1 140 aa11.79□□□□□ -0.52
IRF3-214ENST00000596788 LINC00846Q9NV44 126 aa11.78□□□□□ -0.52
IRF3-214ENST00000596788 FAM240AA0A1B0GVK7 77 aa11.75□□□□□ -0.53
IRF3-214ENST00000596788 LINC00472Q9H8W2 130 aa11.75□□□□□ -0.53
IRF3-214ENST00000596788 Q6ZVQ6 151 aa11.73□□□□□ -0.53
IRF3-214ENST00000596788 ACYP1P07311 99 aa11.72□□□□□ -0.53
IRF3-214ENST00000596788 NREPQ16612 68 aa11.72□□□□□ -0.53
IRF3-214ENST00000596788 DEFB116Q30KQ4 102 aa11.71□□□□□ -0.53
IRF3-214ENST00000596788 J3QR89 54 aa11.7□□□□□ -0.54
IRF3-214ENST00000596788 FP248Q71RG6 208 aaPredicted RBP11.68□□□□□ -0.54
IRF3-214ENST00000596788 UBL5Q9BZL1 73 aa11.68□□□□□ -0.54
IRF3-214ENST00000596788 IGKV4-1P06312 121 aa11.67□□□□□ -0.54
IRF3-214ENST00000596788 PRR4Q16378 134 aa11.66□□□□□ -0.54
IRF3-214ENST00000596788 SIGMAR1Q99720 223 aa11.66□□□□□ -0.54
IRF3-214ENST00000596788 HERC1Q15751 4861 aa11.66□□□□□ -0.54
IRF3-214ENST00000596788 IGLV7-46A0A075B6I9 117 aa11.62□□□□□ -0.55
IRF3-214ENST00000596788 J3KT08 172 aa11.62□□□□□ -0.55
IRF3-214ENST00000596788 K7ERU9 68 aa11.62□□□□□ -0.55
IRF3-214ENST00000596788 BPY2O14599 106 aa11.59□□□□□ -0.55
IRF3-214ENST00000596788 DSCR10P59022 87 aa11.57□□□□□ -0.56
IRF3-214ENST00000596788 A8MWP4 228 aa11.55□□□□□ -0.56
IRF3-214ENST00000596788 CDIP1Q9H305 208 aa11.55□□□□□ -0.56
IRF3-214ENST00000596788 IGKV3D-7A0A0C4DH55 119 aa11.53□□□□□ -0.56
IRF3-214ENST00000596788 A0A1B0GVX0 72 aa11.52□□□□□ -0.57
IRF3-214ENST00000596788 KRTAP13-3Q3SY46 172 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms