RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 KRTAP20-2Q3LI61 65 aa-0.42□□□□□ -2.48
PPP4R1-227ENST00000583988 ST20Q9HBF5 79 aa-0.42□□□□□ -2.48
PPP4R1-227ENST00000583988 DIP2BQ9P265 1576 aa-0.42□□□□□ -2.48
PPP4R1-227ENST00000583988 DDX60LQ5H9U9 1706 aaKnown RBP-0.43□□□□□ -2.48
PPP4R1-227ENST00000583988 A0A087WXM4 84 aa-0.43□□□□□ -2.48
PPP4R1-227ENST00000583988 LCE6AA0A183 80 aa-0.43□□□□□ -2.48
PPP4R1-227ENST00000583988 C9orf92A6NGG3 77 aa-0.43□□□□□ -2.48
PPP4R1-227ENST00000583988 H3BNG1 76 aa-0.43□□□□□ -2.48
PPP4R1-227ENST00000583988 KRTAP19-8Q3LI54 63 aa-0.43□□□□□ -2.48
PPP4R1-227ENST00000583988 KRTAP20-1Q3LI63 56 aa-0.43□□□□□ -2.48
PPP4R1-227ENST00000583988 TDRG1Q3Y452 100 aa-0.43□□□□□ -2.48
PPP4R1-227ENST00000583988 PKD1P98161 4303 aa-0.43□□□□□ -2.48
PPP4R1-227ENST00000583988 HERC2O95714 4834 aa-0.43□□□□□ -2.48
PPP4R1-227ENST00000583988 WIZO95785 1651 aa-0.43□□□□□ -2.48
PPP4R1-227ENST00000583988 HIVEP1P15822 2718 aa-0.44□□□□□ -2.48
PPP4R1-227ENST00000583988 NDUFA4O00483 81 aa-0.44□□□□□ -2.48
PPP4R1-227ENST00000583988 MT4P47944 62 aa-0.44□□□□□ -2.48
PPP4R1-227ENST00000583988 ZNF831Q5JPB2 1677 aa-0.44□□□□□ -2.48
PPP4R1-227ENST00000583988 ABCA13Q86UQ4 5058 aa-0.44□□□□□ -2.48
PPP4R1-227ENST00000583988 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.44□□□□□ -2.48
PPP4R1-227ENST00000583988 ANKRD50Q9ULJ7 1429 aa-0.45□□□□□ -2.48
PPP4R1-227ENST00000583988 IFI6P09912 130 aa-0.45□□□□□ -2.48
PPP4R1-227ENST00000583988 NREPQ16612 68 aa-0.45□□□□□ -2.48
PPP4R1-227ENST00000583988 THOC2Q8NI27 1593 aaKnown RBP-0.45□□□□□ -2.48
PPP4R1-227ENST00000583988 LYSTQ99698 3801 aa-0.46□□□□□ -2.48
PPP4R1-227ENST00000583988 CFAP43Q8NDM7 1665 aa-0.46□□□□□ -2.48
PPP4R1-227ENST00000583988 SCN11AQ9UI33 1791 aa-0.46□□□□□ -2.48
PPP4R1-227ENST00000583988 SMARCA2P51531 1590 aa-0.46□□□□□ -2.48
PPP4R1-227ENST00000583988 ZZEF1O43149 2961 aa-0.46□□□□□ -2.48
PPP4R1-227ENST00000583988 CCDC18Q5T9S5 1454 aa-0.47□□□□□ -2.48
PPP4R1-227ENST00000583988 HERC1Q15751 4861 aa-0.47□□□□□ -2.48
PPP4R1-227ENST00000583988 ABCC1P33527 1531 aa-0.47□□□□□ -2.48
PPP4R1-227ENST00000583988 LAMA5O15230 3695 aa-0.47□□□□□ -2.48
PPP4R1-227ENST00000583988 MRPL33O75394 65 aaKnown RBP-0.47□□□□□ -2.48
PPP4R1-227ENST00000583988 DEFA5Q01523 94 aa-0.47□□□□□ -2.48
PPP4R1-227ENST00000583988 DEFB121Q5J5C9 76 aa-0.47□□□□□ -2.48
PPP4R1-227ENST00000583988 TEP1Q99973 2627 aaKnown RBP-0.47□□□□□ -2.48
PPP4R1-227ENST00000583988 PLCH1Q4KWH8 1693 aa-0.47□□□□□ -2.48
PPP4R1-227ENST00000583988 TACC2O95359 2948 aa-0.48□□□□□ -2.49
PPP4R1-227ENST00000583988 DCAF1Q9Y4B6 1507 aa-0.48□□□□□ -2.49
PPP4R1-227ENST00000583988 HTTP42858 3142 aa-0.48□□□□□ -2.49
PPP4R1-227ENST00000583988 DSPP15924 2871 aaKnown RBP-0.48□□□□□ -2.49
PPP4R1-227ENST00000583988 MTORP42345 2549 aa-0.48□□□□□ -2.49
PPP4R1-227ENST00000583988 LYNX1G3V0Z9 82 aa-0.48□□□□□ -2.49
PPP4R1-227ENST00000583988 SMIM13P0DJ93 91 aa-0.48□□□□□ -2.49
PPP4R1-227ENST00000583988 FASNP49327 2511 aaKnown RBP-0.48□□□□□ -2.49
PPP4R1-227ENST00000583988 H0YAA0 97 aa-0.49□□□□□ -2.49
PPP4R1-227ENST00000583988 H3BUT2 72 aa-0.49□□□□□ -2.49
PPP4R1-227ENST00000583988 MT1AP04731 61 aa-0.49□□□□□ -2.49
PPP4R1-227ENST00000583988 SPRR2FQ96RM1 72 aa-0.49□□□□□ -2.49
PPP4R1-227ENST00000583988 MED14O60244 1454 aa-0.49□□□□□ -2.49
PPP4R1-227ENST00000583988 KDM5DQ9BY66 1539 aa-0.49□□□□□ -2.49
PPP4R1-227ENST00000583988 ITSN1Q15811 1721 aa-0.5□□□□□ -2.49
PPP4R1-227ENST00000583988 IAPPP10997 89 aa-0.5□□□□□ -2.49
PPP4R1-227ENST00000583988 PRLHP81277 87 aa-0.5□□□□□ -2.49
PPP4R1-227ENST00000583988 ANKRD11Q6UB99 2663 aaPredicted RBP-0.5□□□□□ -2.49
PPP4R1-227ENST00000583988 HFM1A2PYH4 1435 aa-0.5□□□□□ -2.49
PPP4R1-227ENST00000583988 AKAP9Q99996 3911 aa-0.5□□□□□ -2.49
PPP4R1-227ENST00000583988 ACACAQ13085 2346 aa-0.5□□□□□ -2.49
PPP4R1-227ENST00000583988 NBPF19A0A087WUL8 3843 aa-0.51□□□□□ -2.49
PPP4R1-227ENST00000583988 DEFB131BA0A096LNP1 70 aa-0.51□□□□□ -2.49
PPP4R1-227ENST00000583988 RICTORQ6R327 1708 aa-0.51□□□□□ -2.49
PPP4R1-227ENST00000583988 DMXL1Q9Y485 3027 aa-0.51□□□□□ -2.49
PPP4R1-227ENST00000583988 CEP290O15078 2479 aa-0.52□□□□□ -2.49
PPP4R1-227ENST00000583988 DNAH6Q9C0G6 4158 aa-0.52□□□□□ -2.49
PPP4R1-227ENST00000583988 MAP3K1Q13233 1512 aa-0.52□□□□□ -2.49
PPP4R1-227ENST00000583988 ERVK-7P63135 1459 aa-0.52□□□□□ -2.49
PPP4R1-227ENST00000583988 DEFB130BP0DP73 79 aa-0.52□□□□□ -2.49
PPP4R1-227ENST00000583988 DEFB130AP0DP74 79 aa-0.52□□□□□ -2.49
PPP4R1-227ENST00000583988 UBL5Q9BZL1 73 aa-0.52□□□□□ -2.49
PPP4R1-227ENST00000583988 LRRK2Q5S007 2527 aa-0.52□□□□□ -2.49
PPP4R1-227ENST00000583988 CFAP74Q9C0B2 1584 aa-0.53□□□□□ -2.49
PPP4R1-227ENST00000583988 RALGAPBQ86X10 1494 aa-0.53□□□□□ -2.49
PPP4R1-227ENST00000583988 GCN1Q92616 2671 aaKnown RBP-0.53□□□□□ -2.49
PPP4R1-227ENST00000583988 FAT1Q14517 4588 aa-0.53□□□□□ -2.49
PPP4R1-227ENST00000583988 BVES-AS1Q5T3Y7 98 aa-0.53□□□□□ -2.49
PPP4R1-227ENST00000583988 FAM186AA6NE01 2351 aa-0.53□□□□□ -2.49
PPP4R1-227ENST00000583988 PKD1L2Q7Z442 2459 aa-0.54□□□□□ -2.5
PPP4R1-227ENST00000583988 STARD9Q9P2P6 4700 aa-0.54□□□□□ -2.5
PPP4R1-227ENST00000583988 FAT3Q8TDW7 4589 aa-0.55□□□□□ -2.5
PPP4R1-227ENST00000583988 MYO18BQ8IUG5 2567 aa-0.55□□□□□ -2.5
PPP4R1-227ENST00000583988 ARHGAP35Q9NRY4 1499 aa-0.55□□□□□ -2.5
PPP4R1-227ENST00000583988 ANKARQ7Z5J8 1434 aa-0.55□□□□□ -2.5
PPP4R1-227ENST00000583988 DEFB106AQ8N104 65 aa-0.56□□□□□ -2.5
PPP4R1-227ENST00000583988 KCNQ1DNQ9H478 68 aa-0.56□□□□□ -2.5
PPP4R1-227ENST00000583988 KIAA0586Q9BVV6 1533 aa-0.56□□□□□ -2.5
PPP4R1-227ENST00000583988 DNAH9Q9NYC9 4486 aa-0.56□□□□□ -2.5
PPP4R1-227ENST00000583988 TJP1Q07157 1748 aa-0.56□□□□□ -2.5
PPP4R1-227ENST00000583988 CUBNO60494 3623 aa-0.56□□□□□ -2.5
PPP4R1-227ENST00000583988 ZC3H13Q5T200 1668 aaKnown RBP-0.56□□□□□ -2.5
PPP4R1-227ENST00000583988 UTP20O75691 2785 aaKnown RBP-0.57□□□□□ -2.5
PPP4R1-227ENST00000583988 C18orf32Q8TCD1 76 aa-0.57□□□□□ -2.5
PPP4R1-227ENST00000583988 S4R3F8 94 aa-0.57□□□□□ -2.5
PPP4R1-227ENST00000583988 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.57□□□□□ -2.5
PPP4R1-227ENST00000583988 NBEAL2Q6ZNJ1 2754 aa-0.58□□□□□ -2.5
PPP4R1-227ENST00000583988 LAMA1P25391 3075 aa-0.58□□□□□ -2.5
PPP4R1-227ENST00000583988 ITPR3Q14573 2671 aa-0.58□□□□□ -2.5
PPP4R1-227ENST00000583988 COL6A5A8TX70 2615 aa-0.58□□□□□ -2.5
PPP4R1-227ENST00000583988 NBEAQ8NFP9 2946 aa-0.58□□□□□ -2.5
PPP4R1-227ENST00000583988 LMTK2Q8IWU2 1503 aa-0.59□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms