RNA–Protein interactions for RNA: ENST00000575116.1

PRPF8-212, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 3

Gene PRPF8, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-212ENST00000575116 SMIM29Q86T20 159 aa7.12□□□□□ -1.27
PRPF8-212ENST00000575116 HSPG2P98160 4391 aa7.12□□□□□ -1.27
PRPF8-212ENST00000575116 VPS13BQ7Z7G8 4022 aa7.11□□□□□ -1.27
PRPF8-212ENST00000575116 KRTAP1-4P0C5Y4 121 aa7.11□□□□□ -1.27
PRPF8-212ENST00000575116 KIAA1109Q2LD37 5005 aa7.11□□□□□ -1.27
PRPF8-212ENST00000575116 SMCPP49901 116 aaPredicted RBP7.1□□□□□ -1.27
PRPF8-212ENST00000575116 MTURNQ8N3F0 131 aa7.1□□□□□ -1.27
PRPF8-212ENST00000575116 F8WEM9 126 aa7.09□□□□□ -1.27
PRPF8-212ENST00000575116 JMJD7-PLA2G4BH0Y9G9 81 aa7.09□□□□□ -1.27
PRPF8-212ENST00000575116 IGLV8-61A0A075B6I0 122 aa7.08□□□□□ -1.28
PRPF8-212ENST00000575116 CRYGAP11844 174 aa7.08□□□□□ -1.28
PRPF8-212ENST00000575116 C3orf22Q8N5N4 141 aa7.08□□□□□ -1.28
PRPF8-212ENST00000575116 ANAPC11Q9NYG5 84 aa7.08□□□□□ -1.28
PRPF8-212ENST00000575116 OBSCN-AS1Q96MR7 158 aa7.07□□□□□ -1.28
PRPF8-212ENST00000575116 RBM3P98179 157 aaKnown RBP7.06□□□□□ -1.28
PRPF8-212ENST00000575116 SRRM2Q9UQ35 2752 aaKnown RBP7.06□□□□□ -1.28
PRPF8-212ENST00000575116 FAT1Q14517 4588 aa7.05□□□□□ -1.28
PRPF8-212ENST00000575116 Q6JHZ5 121 aa7.05□□□□□ -1.28
PRPF8-212ENST00000575116 SSBP3-AS1Q7Z2R9 100 aa7.05□□□□□ -1.28
PRPF8-212ENST00000575116 A0A087X002 238 aa7.04□□□□□ -1.28
PRPF8-212ENST00000575116 IGLV9-49A0A0B4J1Y8 123 aa7.04□□□□□ -1.28
PRPF8-212ENST00000575116 TEN1Q86WV5 123 aa7.04□□□□□ -1.28
PRPF8-212ENST00000575116 Q8NBF4 154 aa7.04□□□□□ -1.28
PRPF8-212ENST00000575116 KRTAP13-2Q52LG2 175 aa7.03□□□□□ -1.28
PRPF8-212ENST00000575116 PDE6GP18545 87 aa7.02□□□□□ -1.29
PRPF8-212ENST00000575116 MOBPQ13875 183 aa7.02□□□□□ -1.29
PRPF8-212ENST00000575116 C21orf62-AS1Q17RA5 79 aa7.02□□□□□ -1.29
PRPF8-212ENST00000575116 ETDBQ3ZM63 59 aa7.02□□□□□ -1.29
PRPF8-212ENST00000575116 C9orf153Q5TBE3 101 aa7.02□□□□□ -1.29
PRPF8-212ENST00000575116 DSCR8Q96T75 97 aa7.02□□□□□ -1.29
PRPF8-212ENST00000575116 KRTAP4-5Q9BYR2 181 aa7.02□□□□□ -1.29
PRPF8-212ENST00000575116 TRBV7-4A0A0J9YYF1 115 aa7.01□□□□□ -1.29
PRPF8-212ENST00000575116 PRR26Q8N8Z3 221 aa7.01□□□□□ -1.29
PRPF8-212ENST00000575116 PKHD1L1Q86WI1 4243 aa7□□□□□ -1.29
PRPF8-212ENST00000575116 LOC110117498A0A087WWA1 95 aa7□□□□□ -1.29
PRPF8-212ENST00000575116 IGFL1Q6UW32 110 aa7□□□□□ -1.29
PRPF8-212ENST00000575116 TYMSOSQ8TAI1 123 aa7□□□□□ -1.29
PRPF8-212ENST00000575116 OXTP01178 125 aa6.99□□□□□ -1.29
PRPF8-212ENST00000575116 A0A1B0GV72 72 aa6.98□□□□□ -1.29
PRPF8-212ENST00000575116 C14orf132Q9NPU4 83 aa6.98□□□□□ -1.29
PRPF8-212ENST00000575116 KRTAP10-8P60410 259 aa6.97□□□□□ -1.29
PRPF8-212ENST00000575116 CD164Q04900 197 aa6.97□□□□□ -1.29
PRPF8-212ENST00000575116 Q6Q795 121 aa6.97□□□□□ -1.29
PRPF8-212ENST00000575116 Q6ZQT0 140 aa6.97□□□□□ -1.29
PRPF8-212ENST00000575116 A0A1B0GW54 56 aa6.95□□□□□ -1.3
PRPF8-212ENST00000575116 CCKP06307 115 aa6.95□□□□□ -1.3
PRPF8-212ENST00000575116 A0A1W2PNM2 257 aa6.94□□□□□ -1.3
PRPF8-212ENST00000575116 KRTAP29-1A8MX34 341 aaPredicted RBP6.94□□□□□ -1.3
PRPF8-212ENST00000575116 SPAG11AQ6PDA7 123 aa6.94□□□□□ -1.3
PRPF8-212ENST00000575116 HERC2O95714 4834 aa6.93□□□□□ -1.3
PRPF8-212ENST00000575116 A0A0G2JQZ4 141 aa6.93□□□□□ -1.3
PRPF8-212ENST00000575116 C4orf48Q5BLP8 95 aa6.93□□□□□ -1.3
PRPF8-212ENST00000575116 LINC00304Q8N9R0 145 aa6.92□□□□□ -1.3
PRPF8-212ENST00000575116 SPINK1P00995 79 aa6.91□□□□□ -1.3
PRPF8-212ENST00000575116 VPS25Q9BRG1 176 aa6.91□□□□□ -1.3
PRPF8-212ENST00000575116 TRBV7-7A0A0K0K1E9 115 aa6.9□□□□□ -1.3
PRPF8-212ENST00000575116 MT1HL1P0DM35 61 aa6.9□□□□□ -1.3
PRPF8-212ENST00000575116 RPS29P62273 56 aaKnown RBP6.9□□□□□ -1.3
PRPF8-212ENST00000575116 J3QR89 54 aa6.89□□□□□ -1.31
PRPF8-212ENST00000575116 HRCT1Q6UXD1 115 aa6.89□□□□□ -1.31
PRPF8-212ENST00000575116 ACYP1P07311 99 aa6.88□□□□□ -1.31
PRPF8-212ENST00000575116 Q5XG85 94 aa6.88□□□□□ -1.31
PRPF8-212ENST00000575116 FAM240AA0A1B0GVK7 77 aa6.86□□□□□ -1.31
PRPF8-212ENST00000575116 LIMD2Q9BT23 127 aa6.86□□□□□ -1.31
PRPF8-212ENST00000575116 SS18L2Q9UHA2 77 aa6.86□□□□□ -1.31
PRPF8-212ENST00000575116 A0A087WSZ3 146 aa6.85□□□□□ -1.31
PRPF8-212ENST00000575116 FLG2Q5D862 2391 aaPredicted RBP6.84□□□□□ -1.31
PRPF8-212ENST00000575116 ASB16-AS1Q495Z4 193 aa6.84□□□□□ -1.31
PRPF8-212ENST00000575116 K7ERU9 68 aa6.83□□□□□ -1.32
PRPF8-212ENST00000575116 J3QL48 77 aa6.82□□□□□ -1.32
PRPF8-212ENST00000575116 FAT3Q8TDW7 4589 aa6.81□□□□□ -1.32
PRPF8-212ENST00000575116 NREPQ16612 68 aa6.81□□□□□ -1.32
PRPF8-212ENST00000575116 LINC00846Q9NV44 126 aa6.81□□□□□ -1.32
PRPF8-212ENST00000575116 PCLOQ9Y6V0 5065 aa6.8□□□□□ -1.32
PRPF8-212ENST00000575116 UBL5Q9BZL1 73 aa6.8□□□□□ -1.32
PRPF8-212ENST00000575116 LRP1Q07954 4544 aaKnown RBP6.8□□□□□ -1.32
PRPF8-212ENST00000575116 Q6ZVQ6 151 aa6.78□□□□□ -1.32
PRPF8-212ENST00000575116 ABCA13Q86UQ4 5058 aa6.78□□□□□ -1.32
PRPF8-212ENST00000575116 LINC00472Q9H8W2 130 aa6.77□□□□□ -1.33
PRPF8-212ENST00000575116 C1orf195Q5TG92 126 aa6.76□□□□□ -1.33
PRPF8-212ENST00000575116 Q96NJ1 140 aa6.76□□□□□ -1.33
PRPF8-212ENST00000575116 TNXBP22105 4242 aa6.76□□□□□ -1.33
PRPF8-212ENST00000575116 J3KT08 172 aa6.75□□□□□ -1.33
PRPF8-212ENST00000575116 MYCBP2O75592 4640 aa6.74□□□□□ -1.33
PRPF8-212ENST00000575116 BPY2O14599 106 aa6.72□□□□□ -1.33
PRPF8-212ENST00000575116 SIGMAR1Q99720 223 aa6.72□□□□□ -1.33
PRPF8-212ENST00000575116 IGKV4-1P06312 121 aa6.71□□□□□ -1.34
PRPF8-212ENST00000575116 FP248Q71RG6 208 aaPredicted RBP6.71□□□□□ -1.34
PRPF8-212ENST00000575116 LINC00643Q86TS7 51 aa6.71□□□□□ -1.34
PRPF8-212ENST00000575116 CDIP1Q9H305 208 aa6.71□□□□□ -1.34
PRPF8-212ENST00000575116 DMBT1Q9UGM3 2413 aaPredicted RBP6.7□□□□□ -1.34
PRPF8-212ENST00000575116 CXCL6P80162 114 aa6.7□□□□□ -1.34
PRPF8-212ENST00000575116 DEFB116Q30KQ4 102 aa6.7□□□□□ -1.34
PRPF8-212ENST00000575116 ATP5EP2Q5VTU8 51 aa6.7□□□□□ -1.34
PRPF8-212ENST00000575116 NDUFB1O75438 58 aa6.68□□□□□ -1.34
PRPF8-212ENST00000575116 RETNLBQ9BQ08 111 aa6.68□□□□□ -1.34
PRPF8-212ENST00000575116 A8MWP4 228 aa6.67□□□□□ -1.34
PRPF8-212ENST00000575116 DSCR10P59022 87 aa6.67□□□□□ -1.34
PRPF8-212ENST00000575116 PRR15Q8IV56 129 aa6.64□□□□□ -1.35
PRPF8-212ENST00000575116 IGLV7-46A0A075B6I9 117 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms