RNA–Protein interactions for RNA: ENST00000575116.1

PRPF8-212, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 3

Gene PRPF8, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-212ENST00000575116 NISCHQ9Y2I1 1504 aa27.8■■■□□ 2.04
PRPF8-212ENST00000575116 CCDC180Q9P1Z9 1646 aa24.46■■□□□ 1.51
PRPF8-212ENST00000575116 ABCC9O60706 1549 aa23.35■■□□□ 1.33
PRPF8-212ENST00000575116 ZCCHC6Q5VYS8 1495 aaKnown RBP23.26■■□□□ 1.31
PRPF8-212ENST00000575116 DCAF1Q9Y4B6 1507 aa23.07■■□□□ 1.28
PRPF8-212ENST00000575116 DCAF8L2P0C7V8 631 aa22.98■■□□□ 1.27
PRPF8-212ENST00000575116 MYO15BQ96JP2 1530 aa22.97■■□□□ 1.27
PRPF8-212ENST00000575116 NACADO15069 1562 aa22.89■■□□□ 1.25
PRPF8-212ENST00000575116 RB1CC1Q8TDY2 1594 aa22.76■■□□□ 1.23
PRPF8-212ENST00000575116 SCRIBQ14160 1630 aa22.31■■□□□ 1.16
PRPF8-212ENST00000575116 SHROOM4Q9ULL8 1493 aa22.23■■□□□ 1.15
PRPF8-212ENST00000575116 UNC13AQ9UPW8 1703 aa22.2■■□□□ 1.14
PRPF8-212ENST00000575116 BICRAQ9NZM4 1560 aa22.03■■□□□ 1.12
PRPF8-212ENST00000575116 PABPN1Q86U42 306 aaKnown RBP eCLIP21.93■■□□□ 1.1
PRPF8-212ENST00000575116 CECR2Q9BXF3 1484 aa21.56■■□□□ 1.04
PRPF8-212ENST00000575116 BAZ1AQ9NRL2 1556 aaPredicted RBP21.51■■□□□ 1.03
PRPF8-212ENST00000575116 SMARCA4P51532 1647 aa21.43■■□□□ 1.02
PRPF8-212ENST00000575116 MROH2BQ7Z745 1585 aa21.41■■□□□ 1.02
PRPF8-212ENST00000575116 EIF4G1Q04637 1599 aaKnown RBP21.4■■□□□ 1.02
PRPF8-212ENST00000575116 RSF1Q96T23 1441 aaPredicted RBP21.39■■□□□ 1.02
PRPF8-212ENST00000575116 SUPT5HO00267 1087 aaKnown RBP21.26■□□□□ 0.99
PRPF8-212ENST00000575116 PEG3Q9GZU2 1588 aa21.24■□□□□ 0.99
PRPF8-212ENST00000575116 SMARCA2P51531 1590 aa21.2■□□□□ 0.98
PRPF8-212ENST00000575116 WIZO95785 1651 aa21.19■□□□□ 0.98
PRPF8-212ENST00000575116 ATAD2BQ9ULI0 1458 aa21.19■□□□□ 0.98
PRPF8-212ENST00000575116 CC2D2AQ9P2K1 1620 aa21.16■□□□□ 0.98
PRPF8-212ENST00000575116 NCAPD3P42695 1498 aa21.13■□□□□ 0.97
PRPF8-212ENST00000575116 HMGXB3Q12766 1538 aa21.04■□□□□ 0.96
PRPF8-212ENST00000575116 BAZ1BQ9UIG0 1483 aaKnown RBP21.04■□□□□ 0.96
PRPF8-212ENST00000575116 TOP2AP11388 1531 aaKnown RBP21.03■□□□□ 0.96
PRPF8-212ENST00000575116 DNAJC5BQ9UF47 199 aa20.94■□□□□ 0.94
PRPF8-212ENST00000575116 CCDC88BA6NC98 1476 aa20.78■□□□□ 0.92
PRPF8-212ENST00000575116 CADPSQ9ULU8 1353 aa20.53■□□□□ 0.88
PRPF8-212ENST00000575116 CFTRP13569 1480 aa20.52■□□□□ 0.88
PRPF8-212ENST00000575116 LAMC3Q9Y6N6 1575 aa20.46■□□□□ 0.87
PRPF8-212ENST00000575116 PRDM2Q13029 1718 aa20.39■□□□□ 0.85
PRPF8-212ENST00000575116 NESP48681 1621 aa20.37■□□□□ 0.85
PRPF8-212ENST00000575116 PDS5BQ9NTI5 1447 aa20.31■□□□□ 0.84
PRPF8-212ENST00000575116 FANCD2Q9BXW9 1451 aa20.26■□□□□ 0.83
PRPF8-212ENST00000575116 CHIC1Q5VXU3 224 aa20.21■□□□□ 0.83
PRPF8-212ENST00000575116 CEP164Q9UPV0 1460 aa20.18■□□□□ 0.82
PRPF8-212ENST00000575116 WRNQ14191 1432 aaPredicted RBP eCLIP20.16■□□□□ 0.829e-6■■■■■ 50.1
PRPF8-212ENST00000575116 ABCC8Q09428 1581 aa20.15■□□□□ 0.82
PRPF8-212ENST00000575116 KIF21AQ7Z4S6 1674 aa20.15■□□□□ 0.82
PRPF8-212ENST00000575116 ERCC6Q03468 1493 aa20.1■□□□□ 0.81
PRPF8-212ENST00000575116 TRIM41Q8WV44 630 aa20.09■□□□□ 0.81
PRPF8-212ENST00000575116 CUX1P39880 1505 aa20.05■□□□□ 0.8
PRPF8-212ENST00000575116 TOP2BQ02880 1626 aa20.05■□□□□ 0.8
PRPF8-212ENST00000575116 MRC2Q9UBG0 1479 aa20.05■□□□□ 0.8
PRPF8-212ENST00000575116 BIVM-ERCC5R4GMW8 1640 aa20.04■□□□□ 0.8
PRPF8-212ENST00000575116 SYNJ1O43426 1573 aa20.04■□□□□ 0.8
PRPF8-212ENST00000575116 DNMBPQ6XZF7 1577 aa20.03■□□□□ 0.8
PRPF8-212ENST00000575116 URB2Q14146 1524 aaKnown RBP20.02■□□□□ 0.79
PRPF8-212ENST00000575116 TOPBP1Q92547 1522 aa20■□□□□ 0.79
PRPF8-212ENST00000575116 WDR62O43379 1518 aa19.95■□□□□ 0.78
PRPF8-212ENST00000575116 THOC2Q8NI27 1593 aaKnown RBP19.95■□□□□ 0.78
PRPF8-212ENST00000575116 FGD5Q6ZNL6 1462 aa19.89■□□□□ 0.77
PRPF8-212ENST00000575116 POLA1P09884 1462 aaPredicted RBP19.86■□□□□ 0.77
PRPF8-212ENST00000575116 SOGA1O94964 1423 aa19.82■□□□□ 0.76
PRPF8-212ENST00000575116 CUX2O14529 1486 aa19.77■□□□□ 0.76
PRPF8-212ENST00000575116 IFT140Q96RY7 1462 aa19.76■□□□□ 0.75
PRPF8-212ENST00000575116 RAD54L2Q9Y4B4 1467 aa19.76■□□□□ 0.75
PRPF8-212ENST00000575116 ABCA10Q8WWZ4 1543 aa19.76■□□□□ 0.75
PRPF8-212ENST00000575116 TARBP1Q13395 1621 aaKnown RBP19.74■□□□□ 0.75
PRPF8-212ENST00000575116 EEA1Q15075 1411 aa19.74■□□□□ 0.75
PRPF8-212ENST00000575116 KIF27Q86VH2 1401 aa19.7■□□□□ 0.74
PRPF8-212ENST00000575116 WDR97A6NE52 1622 aa19.69■□□□□ 0.74
PRPF8-212ENST00000575116 RUSC2Q8N2Y8 1516 aa19.65■□□□□ 0.74
PRPF8-212ENST00000575116 CSRNP3Q8WYN3 585 aa19.62■□□□□ 0.73
PRPF8-212ENST00000575116 TDRD9Q8NDG6 1382 aaKnown RBP19.61■□□□□ 0.73
PRPF8-212ENST00000575116 FAM9AQ8IZU1 332 aaPredicted RBP19.61■□□□□ 0.73
PRPF8-212ENST00000575116 ABCA5Q8WWZ7 1642 aa19.6■□□□□ 0.73
PRPF8-212ENST00000575116 GAPVD1Q14C86 1478 aa19.6■□□□□ 0.73
PRPF8-212ENST00000575116 ZNF608Q9ULD9 1512 aaPredicted RBP19.57■□□□□ 0.72
PRPF8-212ENST00000575116 IGF1RP08069 1367 aa19.56■□□□□ 0.72
PRPF8-212ENST00000575116 AQRO60306 1485 aaKnown RBP eCLIP19.55■□□□□ 0.723e-6■■□□□ 12.9
PRPF8-212ENST00000575116 ERICH3Q5RHP9 1530 aa19.54■□□□□ 0.72
PRPF8-212ENST00000575116 GRIN2BQ13224 1484 aa19.52■□□□□ 0.72
PRPF8-212ENST00000575116 EIF4G3O43432 1585 aaKnown RBP19.52■□□□□ 0.71
PRPF8-212ENST00000575116 PBRM1Q86U86 1689 aa19.48■□□□□ 0.71
PRPF8-212ENST00000575116 CARMIL1Q5VZK9 1371 aa19.46■□□□□ 0.71
PRPF8-212ENST00000575116 PRXQ9BXM0 1461 aa19.46■□□□□ 0.71
PRPF8-212ENST00000575116 CUL7Q14999 1698 aa19.46■□□□□ 0.71
PRPF8-212ENST00000575116 KIF21BO75037 1637 aa19.43■□□□□ 0.7
PRPF8-212ENST00000575116 MAGI1Q96QZ7 1491 aaPredicted RBP19.41■□□□□ 0.7
PRPF8-212ENST00000575116 FHAD1B1AJZ9 1412 aa19.4■□□□□ 0.7
PRPF8-212ENST00000575116 RAPGEF2Q9Y4G8 1499 aa19.4■□□□□ 0.7
PRPF8-212ENST00000575116 SNAPC4Q5SXM2 1469 aa19.38■□□□□ 0.69
PRPF8-212ENST00000575116 GOLGA3Q08378 1498 aa19.37■□□□□ 0.69
PRPF8-212ENST00000575116 ADAMTS12P58397 1594 aa19.36■□□□□ 0.69
PRPF8-212ENST00000575116 LOC105371045A0A1W2PR82 267 aa19.35■□□□□ 0.69
PRPF8-212ENST00000575116 SYNJ2O15056 1496 aa19.32■□□□□ 0.68
PRPF8-212ENST00000575116 CHMP7Q8WUX9 453 aaPredicted RBP19.29■□□□□ 0.68
PRPF8-212ENST00000575116 UBTFP17480 764 aaKnown RBP19.28■□□□□ 0.68
PRPF8-212ENST00000575116 TNIKQ9UKE5 1360 aa19.27■□□□□ 0.68
PRPF8-212ENST00000575116 EHMT2Q96KQ7 1210 aa19.26■□□□□ 0.67
PRPF8-212ENST00000575116 GRIN2AQ12879 1464 aa19.25■□□□□ 0.67
PRPF8-212ENST00000575116 FBLN2P98095 1184 aa19.21■□□□□ 0.67
PRPF8-212ENST00000575116 CHD1O14646 1710 aa19.17■□□□□ 0.66
PRPF8-212ENST00000575116 NUP160Q12769 1436 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms