RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 CCKP06307 115 aa6.03□□□□□ -1.44
SF3B3-207ENST00000566095 LINC01547P58512 204 aaPredicted RBP6.03□□□□□ -1.44
SF3B3-207ENST00000566095 HAMPP81172 84 aa6.03□□□□□ -1.44
SF3B3-207ENST00000566095 KRTAP11-1Q8IUC1 163 aa6.03□□□□□ -1.44
SF3B3-207ENST00000566095 LAMTOR3Q9UHA4 124 aa6.03□□□□□ -1.44
SF3B3-207ENST00000566095 PKHD1P08F94 4074 aa6.03□□□□□ -1.44
SF3B3-207ENST00000566095 IGLV8-61A0A075B6I0 122 aa6.02□□□□□ -1.45
SF3B3-207ENST00000566095 SPINK6Q6UWN8 80 aa6.02□□□□□ -1.45
SF3B3-207ENST00000566095 Q8N377 158 aa6.02□□□□□ -1.45
SF3B3-207ENST00000566095 DNAH8Q96JB1 4490 aa6.01□□□□□ -1.45
SF3B3-207ENST00000566095 DYNC1H1Q14204 4646 aaKnown RBP6.01□□□□□ -1.45
SF3B3-207ENST00000566095 LRP1BQ9NZR2 4599 aa6□□□□□ -1.45
SF3B3-207ENST00000566095 Q6ZQT0 140 aa6□□□□□ -1.45
SF3B3-207ENST00000566095 VPS25Q9BRG1 176 aa6□□□□□ -1.45
SF3B3-207ENST00000566095 SMR3BP02814 79 aaPredicted RBP5.99□□□□□ -1.45
SF3B3-207ENST00000566095 Q6JHZ5 121 aa5.99□□□□□ -1.45
SF3B3-207ENST00000566095 DEFB105AQ8NG35 78 aa5.99□□□□□ -1.45
SF3B3-207ENST00000566095 IMUPQ9GZP8 106 aa5.99□□□□□ -1.45
SF3B3-207ENST00000566095 LINC00483Q53H64 154 aa5.98□□□□□ -1.45
SF3B3-207ENST00000566095 GAGE2AQ6NT46 116 aa5.98□□□□□ -1.45
SF3B3-207ENST00000566095 LINC00643Q86TS7 51 aa5.98□□□□□ -1.45
SF3B3-207ENST00000566095 SPRR4Q96PI1 79 aa5.98□□□□□ -1.45
SF3B3-207ENST00000566095 CDIP1Q9H305 208 aa5.98□□□□□ -1.45
SF3B3-207ENST00000566095 C14orf132Q9NPU4 83 aa5.98□□□□□ -1.45
SF3B3-207ENST00000566095 ERC2-IT1O76042 136 aa5.97□□□□□ -1.45
SF3B3-207ENST00000566095 ATP5EP2Q5VTU8 51 aa5.97□□□□□ -1.45
SF3B3-207ENST00000566095 SIGMAR1Q99720 223 aa5.97□□□□□ -1.45
SF3B3-207ENST00000566095 FAM229BQ4G0N7 80 aa5.96□□□□□ -1.46
SF3B3-207ENST00000566095 Q5VSD8 79 aa5.96□□□□□ -1.46
SF3B3-207ENST00000566095 Q6Q795 121 aa5.96□□□□□ -1.46
SF3B3-207ENST00000566095 Q8N1X5 172 aa5.96□□□□□ -1.46
SF3B3-207ENST00000566095 ST20-AS1Q8NBB2 130 aa5.96□□□□□ -1.46
SF3B3-207ENST00000566095 SCGB1A1P11684 91 aa5.95□□□□□ -1.46
SF3B3-207ENST00000566095 SMIM29Q86T20 159 aa5.95□□□□□ -1.46
SF3B3-207ENST00000566095 UBL5Q9BZL1 73 aa5.94□□□□□ -1.46
SF3B3-207ENST00000566095 CRYGAP11844 174 aa5.93□□□□□ -1.46
SF3B3-207ENST00000566095 APOBP04114 4563 aaKnown RBP5.92□□□□□ -1.46
SF3B3-207ENST00000566095 TRBV7-7A0A0K0K1E9 115 aa5.92□□□□□ -1.46
SF3B3-207ENST00000566095 C9orf153Q5TBE3 101 aa5.92□□□□□ -1.46
SF3B3-207ENST00000566095 Q8NBF4 154 aa5.92□□□□□ -1.46
SF3B3-207ENST00000566095 SSBP3-AS1Q7Z2R9 100 aa5.9□□□□□ -1.46
SF3B3-207ENST00000566095 LINC00846Q9NV44 126 aa5.9□□□□□ -1.46
SF3B3-207ENST00000566095 IGLV9-49A0A0B4J1Y8 123 aa5.89□□□□□ -1.47
SF3B3-207ENST00000566095 CXCL6P80162 114 aa5.89□□□□□ -1.47
SF3B3-207ENST00000566095 UBR4Q5T4S7 5183 aa5.88□□□□□ -1.47
SF3B3-207ENST00000566095 HERC2O95714 4834 aa5.88□□□□□ -1.47
SF3B3-207ENST00000566095 KRTAP10-4P60372 401 aaPredicted RBP5.87□□□□□ -1.47
SF3B3-207ENST00000566095 CD164Q04900 197 aa5.87□□□□□ -1.47
SF3B3-207ENST00000566095 C3orf22Q8N5N4 141 aa5.87□□□□□ -1.47
SF3B3-207ENST00000566095 MOBPQ13875 183 aa5.86□□□□□ -1.47
SF3B3-207ENST00000566095 C4orf48Q5BLP8 95 aa5.86□□□□□ -1.47
SF3B3-207ENST00000566095 A0A1B0GV72 72 aa5.85□□□□□ -1.47
SF3B3-207ENST00000566095 A0A1W2PNM2 257 aa5.85□□□□□ -1.47
SF3B3-207ENST00000566095 IGFL1Q6UW32 110 aa5.85□□□□□ -1.47
SF3B3-207ENST00000566095 TYMSOSQ8TAI1 123 aa5.85□□□□□ -1.47
SF3B3-207ENST00000566095 VPS13BQ7Z7G8 4022 aa5.84□□□□□ -1.47
SF3B3-207ENST00000566095 KRTAP1-4P0C5Y4 121 aa5.84□□□□□ -1.47
SF3B3-207ENST00000566095 NREPQ16612 68 aa5.84□□□□□ -1.47
SF3B3-207ENST00000566095 SPAG11AQ6PDA7 123 aa5.84□□□□□ -1.47
SF3B3-207ENST00000566095 Q6ZVQ6 151 aa5.84□□□□□ -1.47
SF3B3-207ENST00000566095 SS18L2Q9UHA2 77 aa5.84□□□□□ -1.47
SF3B3-207ENST00000566095 MT-ATP8P03928 68 aa5.83□□□□□ -1.48
SF3B3-207ENST00000566095 ANAPC11Q9NYG5 84 aa5.82□□□□□ -1.48
SF3B3-207ENST00000566095 HSPG2P98160 4391 aa5.82□□□□□ -1.48
SF3B3-207ENST00000566095 OXTP01178 125 aa5.81□□□□□ -1.48
SF3B3-207ENST00000566095 Q5XG85 94 aa5.81□□□□□ -1.48
SF3B3-207ENST00000566095 LIMD2Q9BT23 127 aa5.81□□□□□ -1.48
SF3B3-207ENST00000566095 A0A087X002 238 aa5.8□□□□□ -1.48
SF3B3-207ENST00000566095 J3KT08 172 aa5.8□□□□□ -1.48
SF3B3-207ENST00000566095 FAT1Q14517 4588 aa5.79□□□□□ -1.48
SF3B3-207ENST00000566095 SPINK1P00995 79 aa5.79□□□□□ -1.48
SF3B3-207ENST00000566095 ASB16-AS1Q495Z4 193 aa5.79□□□□□ -1.48
SF3B3-207ENST00000566095 PRR26Q8N8Z3 221 aa5.79□□□□□ -1.48
SF3B3-207ENST00000566095 RPS29P62273 56 aaKnown RBP5.78□□□□□ -1.48
SF3B3-207ENST00000566095 LINC00304Q8N9R0 145 aa5.78□□□□□ -1.48
SF3B3-207ENST00000566095 BPY2O14599 106 aa5.77□□□□□ -1.49
SF3B3-207ENST00000566095 HIST1H4AP62805 103 aaKnown RBP5.77□□□□□ -1.49
SF3B3-207ENST00000566095 KRTAP13-2Q52LG2 175 aa5.77□□□□□ -1.49
SF3B3-207ENST00000566095 SRRM2Q9UQ35 2752 aaKnown RBP5.77□□□□□ -1.49
SF3B3-207ENST00000566095 KIAA1109Q2LD37 5005 aa5.76□□□□□ -1.49
SF3B3-207ENST00000566095 SMIM20Q8N5G0 67 aa5.76□□□□□ -1.49
SF3B3-207ENST00000566095 A0A087WSZ3 146 aa5.75□□□□□ -1.49
SF3B3-207ENST00000566095 HRCT1Q6UXD1 115 aa5.74□□□□□ -1.49
SF3B3-207ENST00000566095 LINC00472Q9H8W2 130 aa5.74□□□□□ -1.49
SF3B3-207ENST00000566095 ATOX1O00244 68 aa5.73□□□□□ -1.49
SF3B3-207ENST00000566095 IGKV3D-7A0A0C4DH55 119 aa5.72□□□□□ -1.49
SF3B3-207ENST00000566095 KRTAP29-1A8MX34 341 aaPredicted RBP5.72□□□□□ -1.49
SF3B3-207ENST00000566095 KRTAP10-8P60410 259 aa5.71□□□□□ -1.5
SF3B3-207ENST00000566095 PKHD1L1Q86WI1 4243 aa5.7□□□□□ -1.5
SF3B3-207ENST00000566095 J3QL48 77 aa5.7□□□□□ -1.5
SF3B3-207ENST00000566095 A0A0G2JQZ4 141 aa5.69□□□□□ -1.5
SF3B3-207ENST00000566095 FAM236AA0A1B0GUQ0 79 aa5.69□□□□□ -1.5
SF3B3-207ENST00000566095 FAM236BA0A1B0GV22 79 aa5.69□□□□□ -1.5
SF3B3-207ENST00000566095 A8MWP4 228 aa5.69□□□□□ -1.5
SF3B3-207ENST00000566095 NDUFB1O75438 58 aa5.69□□□□□ -1.5
SF3B3-207ENST00000566095 DSCR10P59022 87 aa5.69□□□□□ -1.5
SF3B3-207ENST00000566095 IGKV4-1P06312 121 aa5.68□□□□□ -1.5
SF3B3-207ENST00000566095 PCP4P48539 62 aa5.68□□□□□ -1.5
SF3B3-207ENST00000566095 PRR15Q8IV56 129 aa5.67□□□□□ -1.5
SF3B3-207ENST00000566095 Q96NJ1 140 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms