RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 ZNF861PO60384 105 aa11.97□□□□□ -0.49
CLN6-205ENST00000564846 MT-ATP8P03928 68 aa11.97□□□□□ -0.49
CLN6-205ENST00000564846 LINC00643Q86TS7 51 aa11.96□□□□□ -0.49
CLN6-205ENST00000564846 A0A1B0GVY2 172 aa11.94□□□□□ -0.5
CLN6-205ENST00000564846 IGLV7-43P04211 117 aa11.92□□□□□ -0.5
CLN6-205ENST00000564846 ZNF706Q9Y5V0 76 aaPredicted RBP11.92□□□□□ -0.5
CLN6-205ENST00000564846 IGLV8-61A0A075B6I0 122 aa11.91□□□□□ -0.5
CLN6-205ENST00000564846 SPRR4Q96PI1 79 aa11.9□□□□□ -0.5
CLN6-205ENST00000564846 UBL5Q9BZL1 73 aa11.9□□□□□ -0.5
CLN6-205ENST00000564846 KMT2CQ8NEZ4 4911 aaKnown RBP11.9□□□□□ -0.5
CLN6-205ENST00000564846 HAMPP81172 84 aa11.9□□□□□ -0.51
CLN6-205ENST00000564846 A0A1B0GW54 56 aa11.87□□□□□ -0.51
CLN6-205ENST00000564846 LINC00483Q53H64 154 aa11.87□□□□□ -0.51
CLN6-205ENST00000564846 Q8NBF4 154 aa11.85□□□□□ -0.51
CLN6-205ENST00000564846 A0A1W2PNM2 257 aa11.84□□□□□ -0.51
CLN6-205ENST00000564846 Q6JHZ5 121 aa11.84□□□□□ -0.51
CLN6-205ENST00000564846 SRRM2Q9UQ35 2752 aaKnown RBP11.84□□□□□ -0.51
CLN6-205ENST00000564846 IGFL1Q6UW32 110 aa11.84□□□□□ -0.51
CLN6-205ENST00000564846 TRBV7-7A0A0K0K1E9 115 aa11.83□□□□□ -0.52
CLN6-205ENST00000564846 SCGB1A1P11684 91 aa11.82□□□□□ -0.52
CLN6-205ENST00000564846 Q6Q795 121 aa11.82□□□□□ -0.52
CLN6-205ENST00000564846 Q6ZVQ6 151 aa11.82□□□□□ -0.52
CLN6-205ENST00000564846 IMUPQ9GZP8 106 aa11.82□□□□□ -0.52
CLN6-205ENST00000564846 PKHD1P08F94 4074 aa11.82□□□□□ -0.52
CLN6-205ENST00000564846 ATP5EP2Q5VTU8 51 aa11.81□□□□□ -0.52
CLN6-205ENST00000564846 LRP1BQ9NZR2 4599 aa11.81□□□□□ -0.52
CLN6-205ENST00000564846 CRYGAP11844 174 aa11.78□□□□□ -0.52
CLN6-205ENST00000564846 IGKV3D-7A0A0C4DH55 119 aa11.76□□□□□ -0.53
CLN6-205ENST00000564846 DYNC1H1Q14204 4646 aaKnown RBP11.76□□□□□ -0.53
CLN6-205ENST00000564846 A0A0G2JQZ4 141 aa11.75□□□□□ -0.53
CLN6-205ENST00000564846 RPL37AP61513 92 aaKnown RBP11.75□□□□□ -0.53
CLN6-205ENST00000564846 NREPQ16612 68 aa11.75□□□□□ -0.53
CLN6-205ENST00000564846 IGLV9-49A0A0B4J1Y8 123 aa11.74□□□□□ -0.53
CLN6-205ENST00000564846 C9orf153Q5TBE3 101 aa11.74□□□□□ -0.53
CLN6-205ENST00000564846 CXCL6P80162 114 aa11.72□□□□□ -0.53
CLN6-205ENST00000564846 ANAPC11Q9NYG5 84 aa11.72□□□□□ -0.53
CLN6-205ENST00000564846 MOBPQ13875 183 aa11.67□□□□□ -0.54
CLN6-205ENST00000564846 A0A087WSZ3 146 aa11.67□□□□□ -0.54
CLN6-205ENST00000564846 VPS13BQ7Z7G8 4022 aa11.66□□□□□ -0.54
CLN6-205ENST00000564846 PCP4P48539 62 aa11.65□□□□□ -0.54
CLN6-205ENST00000564846 HIST1H4AP62805 103 aaKnown RBP11.64□□□□□ -0.55
CLN6-205ENST00000564846 BPY2O14599 106 aa11.64□□□□□ -0.55
CLN6-205ENST00000564846 RYR3Q15413 4870 aa11.64□□□□□ -0.55
CLN6-205ENST00000564846 SMR3BP02814 79 aaPredicted RBP11.62□□□□□ -0.55
CLN6-205ENST00000564846 FAM229BQ4G0N7 80 aa11.62□□□□□ -0.55
CLN6-205ENST00000564846 APOBP04114 4563 aaKnown RBP11.62□□□□□ -0.55
CLN6-205ENST00000564846 SPINK6Q6UWN8 80 aa11.61□□□□□ -0.55
CLN6-205ENST00000564846 FAM236AA0A1B0GUQ0 79 aa11.59□□□□□ -0.55
CLN6-205ENST00000564846 FAM236BA0A1B0GV22 79 aa11.59□□□□□ -0.55
CLN6-205ENST00000564846 SSBP3-AS1Q7Z2R9 100 aa11.59□□□□□ -0.55
CLN6-205ENST00000564846 A0A087WVE0 104 aa11.59□□□□□ -0.55
CLN6-205ENST00000564846 KRTAP1-4P0C5Y4 121 aa11.57□□□□□ -0.56
CLN6-205ENST00000564846 A0A087X002 238 aa11.55□□□□□ -0.56
CLN6-205ENST00000564846 HRCT1Q6UXD1 115 aa11.54□□□□□ -0.56
CLN6-205ENST00000564846 SS18L2Q9UHA2 77 aa11.53□□□□□ -0.56
CLN6-205ENST00000564846 CD164Q04900 197 aa11.52□□□□□ -0.57
CLN6-205ENST00000564846 KRTAP13-2Q52LG2 175 aa11.51□□□□□ -0.57
CLN6-205ENST00000564846 PLA2G1BP04054 148 aaKnown RBP11.51□□□□□ -0.57
CLN6-205ENST00000564846 KRTAP10-4P60372 401 aaPredicted RBP11.51□□□□□ -0.57
CLN6-205ENST00000564846 IGKV4-1P06312 121 aa11.5□□□□□ -0.57
CLN6-205ENST00000564846 DSCR10P59022 87 aa11.5□□□□□ -0.57
CLN6-205ENST00000564846 Q8N9L7 120 aa11.5□□□□□ -0.57
CLN6-205ENST00000564846 ANAPC13Q9BS18 74 aa11.5□□□□□ -0.57
CLN6-205ENST00000564846 LINC00472Q9H8W2 130 aa11.5□□□□□ -0.57
CLN6-205ENST00000564846 CDK2AP2O75956 126 aa11.49□□□□□ -0.57
CLN6-205ENST00000564846 ATOX1O00244 68 aa11.47□□□□□ -0.57
CLN6-205ENST00000564846 DEFB116Q30KQ4 102 aa11.47□□□□□ -0.57
CLN6-205ENST00000564846 J3KT08 172 aa11.45□□□□□ -0.58
CLN6-205ENST00000564846 FAT1Q14517 4588 aa11.44□□□□□ -0.58
CLN6-205ENST00000564846 FAM229AH3BQW9 127 aa11.44□□□□□ -0.58
CLN6-205ENST00000564846 K7EQZ3 153 aa11.44□□□□□ -0.58
CLN6-205ENST00000564846 Q96NJ1 140 aa11.41□□□□□ -0.58
CLN6-205ENST00000564846 TYMSOSQ8TAI1 123 aa11.41□□□□□ -0.58
CLN6-205ENST00000564846 A8MWP4 228 aa11.39□□□□□ -0.59
CLN6-205ENST00000564846 ASB16-AS1Q495Z4 193 aa11.36□□□□□ -0.59
CLN6-205ENST00000564846 Q5XG85 94 aa11.36□□□□□ -0.59
CLN6-205ENST00000564846 PRR15Q8IV56 129 aa11.36□□□□□ -0.59
CLN6-205ENST00000564846 PRR26Q8N8Z3 221 aa11.36□□□□□ -0.59
CLN6-205ENST00000564846 C4orf48Q5BLP8 95 aa11.34□□□□□ -0.59
CLN6-205ENST00000564846 NDUFB1O75438 58 aa11.33□□□□□ -0.59
CLN6-205ENST00000564846 Q5VSD8 79 aa11.33□□□□□ -0.6
CLN6-205ENST00000564846 HSPG2P98160 4391 aa11.32□□□□□ -0.6
CLN6-205ENST00000564846 SMIM20Q8N5G0 67 aa11.32□□□□□ -0.6
CLN6-205ENST00000564846 HCG22E2RYF7 251 aa11.31□□□□□ -0.6
CLN6-205ENST00000564846 SERP2Q8N6R1 65 aa11.31□□□□□ -0.6
CLN6-205ENST00000564846 RYR1P21817 5038 aa11.31□□□□□ -0.6
CLN6-205ENST00000564846 LIMD2Q9BT23 127 aa11.31□□□□□ -0.6
CLN6-205ENST00000564846 SPINK1P00995 79 aa11.3□□□□□ -0.6
CLN6-205ENST00000564846 COX7CP15954 63 aa11.28□□□□□ -0.6
CLN6-205ENST00000564846 LINC00304Q8N9R0 145 aa11.28□□□□□ -0.6
CLN6-205ENST00000564846 SPAG11AQ6PDA7 123 aa11.27□□□□□ -0.61
CLN6-205ENST00000564846 PKHD1L1Q86WI1 4243 aa11.27□□□□□ -0.61
CLN6-205ENST00000564846 TRAV7A0A075B6U4 112 aa11.26□□□□□ -0.61
CLN6-205ENST00000564846 UQCRQO14949 82 aa11.26□□□□□ -0.61
CLN6-205ENST00000564846 A0A1B0GVX0 72 aa11.24□□□□□ -0.61
CLN6-205ENST00000564846 RPS29P62273 56 aaKnown RBP11.24□□□□□ -0.61
CLN6-205ENST00000564846 CCDC179H3BU77 68 aa11.23□□□□□ -0.61
CLN6-205ENST00000564846 EPPK1P58107 5090 aaKnown RBP11.22□□□□□ -0.61
CLN6-205ENST00000564846 WFDC13Q8IUB5 93 aa11.22□□□□□ -0.61
CLN6-205ENST00000564846 KRTAP29-1A8MX34 341 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 215.3 ms