RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 DEFB131BA0A096LNP1 70 aa2.42□□□□□ -2.02
LRRC28-222ENST00000561431 A0A1B0GU33 70 aa2.42□□□□□ -2.02
LRRC28-222ENST00000561431 C11orf86A6NJI1 115 aa2.42□□□□□ -2.02
LRRC28-222ENST00000561431 IGKV2D-40P01614 121 aaPredicted RBP2.42□□□□□ -2.02
LRRC28-222ENST00000561431 SPART-AS1P0CW21 52 aa2.42□□□□□ -2.02
LRRC28-222ENST00000561431 SMIM13P0DJ93 91 aa2.42□□□□□ -2.02
LRRC28-222ENST00000561431 MGST1P10620 155 aaKnown RBP2.42□□□□□ -2.02
LRRC28-222ENST00000561431 PDE6HQ13956 83 aa2.42□□□□□ -2.02
LRRC28-222ENST00000561431 PRR9Q5T870 116 aa2.42□□□□□ -2.02
LRRC28-222ENST00000561431 HECTD4Q9Y4D8 3996 aa2.42□□□□□ -2.02
LRRC28-222ENST00000561431 BIRC6Q9NR09 4857 aa2.41□□□□□ -2.02
LRRC28-222ENST00000561431 TRAV12-3A0A0B4J271 114 aa2.41□□□□□ -2.02
LRRC28-222ENST00000561431 HCG22E2RYF7 251 aa2.41□□□□□ -2.02
LRRC28-222ENST00000561431 ST20-AS1Q8NBB2 130 aa2.41□□□□□ -2.02
LRRC28-222ENST00000561431 Q8TAT8 98 aa2.41□□□□□ -2.02
LRRC28-222ENST00000561431 TMEM263Q8WUH6 116 aaKnown RBP2.41□□□□□ -2.02
LRRC28-222ENST00000561431 FRAS1Q86XX4 4008 aa2.4□□□□□ -2.03
LRRC28-222ENST00000561431 TRBV7-3A0A075B6L6 115 aa2.4□□□□□ -2.03
LRRC28-222ENST00000561431 IGHV3-64A0A075B6Q5 118 aa2.4□□□□□ -2.03
LRRC28-222ENST00000561431 DEFB130BP0DP73 79 aa2.4□□□□□ -2.03
LRRC28-222ENST00000561431 DEFB130AP0DP74 79 aa2.4□□□□□ -2.03
LRRC28-222ENST00000561431 HTN1P15515 57 aa2.4□□□□□ -2.03
LRRC28-222ENST00000561431 HTN3P15516 51 aa2.4□□□□□ -2.03
LRRC28-222ENST00000561431 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.4□□□□□ -2.03
LRRC28-222ENST00000561431 LYPD1Q8N2G4 141 aa2.4□□□□□ -2.03
LRRC28-222ENST00000561431 TMEM254Q8TBM7 123 aa2.4□□□□□ -2.03
LRRC28-222ENST00000561431 NOP10Q9NPE3 64 aaKnown RBP2.4□□□□□ -2.03
LRRC28-222ENST00000561431 VPS13DQ5THJ4 4388 aa2.4□□□□□ -2.03
LRRC28-222ENST00000561431 KMT2AQ03164 3969 aa2.39□□□□□ -2.03
LRRC28-222ENST00000561431 FXYD6-FXYD2A0A087WZ82 144 aa2.39□□□□□ -2.03
LRRC28-222ENST00000561431 RTL8CO15255 209 aa2.39□□□□□ -2.03
LRRC28-222ENST00000561431 SPINK4O60575 86 aa2.39□□□□□ -2.03
LRRC28-222ENST00000561431 ERC2-IT1O76042 136 aa2.39□□□□□ -2.03
LRRC28-222ENST00000561431 ARL14EPLP0DKL9 152 aa2.39□□□□□ -2.03
LRRC28-222ENST00000561431 LINC00483Q53H64 154 aa2.39□□□□□ -2.03
LRRC28-222ENST00000561431 Q6ZTI0 123 aa2.39□□□□□ -2.03
LRRC28-222ENST00000561431 SPTSSBQ8NFR3 76 aa2.39□□□□□ -2.03
LRRC28-222ENST00000561431 TVP23CQ96ET8 276 aa2.39□□□□□ -2.03
LRRC28-222ENST00000561431 PRO1854Q9UHT4 67 aa2.39□□□□□ -2.03
LRRC28-222ENST00000561431 C22orf24Q9Y442 160 aa2.39□□□□□ -2.03
LRRC28-222ENST00000561431 TIMM8BQ9Y5J9 83 aaPredicted RBP2.39□□□□□ -2.03
LRRC28-222ENST00000561431 COX8AP10176 69 aa2.38□□□□□ -2.03
LRRC28-222ENST00000561431 GCHFRP30047 84 aa2.38□□□□□ -2.03
LRRC28-222ENST00000561431 LINC00315P59091 139 aa2.38□□□□□ -2.03
LRRC28-222ENST00000561431 SERF2P84101 59 aa2.38□□□□□ -2.03
LRRC28-222ENST00000561431 MIR22HGQ0VDD5 57 aa2.38□□□□□ -2.03
LRRC28-222ENST00000561431 KRTAP26-1Q6PEX3 210 aa2.38□□□□□ -2.03
LRRC28-222ENST00000561431 MANBALQ9NQG1 85 aa2.38□□□□□ -2.03
LRRC28-222ENST00000561431 LENEPQ9Y5L5 61 aa2.38□□□□□ -2.03
LRRC28-222ENST00000561431 DNAH10Q8IVF4 4471 aa2.37□□□□□ -2.03
LRRC28-222ENST00000561431 NACAE9PAV3 2078 aa2.37□□□□□ -2.03
LRRC28-222ENST00000561431 IGLV2-18A0A075B6J9 118 aa2.37□□□□□ -2.03
LRRC28-222ENST00000561431 A0A096LPF7 62 aa2.37□□□□□ -2.03
LRRC28-222ENST00000561431 TRGV1A0A0A0MS02 117 aa2.37□□□□□ -2.03
LRRC28-222ENST00000561431 TRAV22A0A0B4J277 110 aa2.37□□□□□ -2.03
LRRC28-222ENST00000561431 H3BNG1 76 aa2.37□□□□□ -2.03
LRRC28-222ENST00000561431 M0R2N4 97 aa2.37□□□□□ -2.03
LRRC28-222ENST00000561431 COX6CP09669 75 aa2.37□□□□□ -2.03
LRRC28-222ENST00000561431 P0C880 135 aa2.37□□□□□ -2.03
LRRC28-222ENST00000561431 Q5VV11 94 aa2.37□□□□□ -2.03
LRRC28-222ENST00000561431 UBE2DNLQ8IWF7 75 aa2.37□□□□□ -2.03
LRRC28-222ENST00000561431 LIMD2Q9BT23 127 aa2.37□□□□□ -2.03
LRRC28-222ENST00000561431 DNAH6Q9C0G6 4158 aa2.37□□□□□ -2.03
LRRC28-222ENST00000561431 DNAH2Q9P225 4427 aa2.37□□□□□ -2.03
LRRC28-222ENST00000561431 PKD1P98161 4303 aa2.37□□□□□ -2.03
LRRC28-222ENST00000561431 FAT2Q9NYQ8 4349 aa2.37□□□□□ -2.03
LRRC28-222ENST00000561431 TRBV25-1A0A075B6N4 114 aa2.36□□□□□ -2.03
LRRC28-222ENST00000561431 TRGV2A0A075B6R0 118 aa2.36□□□□□ -2.03
LRRC28-222ENST00000561431 TRAV23DV6A0A075B6W5 121 aa2.36□□□□□ -2.03
LRRC28-222ENST00000561431 TRAV12-1A0A0B4J245 112 aa2.36□□□□□ -2.03
LRRC28-222ENST00000561431 A0A0J9YY99 117 aa2.36□□□□□ -2.03
LRRC28-222ENST00000561431 NBDYA0A0U1RRE5 68 aa2.36□□□□□ -2.03
LRRC28-222ENST00000561431 CTXND1A0A1B0GTU2 59 aa2.36□□□□□ -2.03
LRRC28-222ENST00000561431 A0A1W2PNM2 257 aa2.36□□□□□ -2.03
LRRC28-222ENST00000561431 MOBPQ13875 183 aa2.36□□□□□ -2.03
LRRC28-222ENST00000561431 ZNF56Q15929 161 aa2.36□□□□□ -2.03
LRRC28-222ENST00000561431 C2orf82Q6UX34 121 aa2.36□□□□□ -2.03
LRRC28-222ENST00000561431 Q86TA4 180 aa2.36□□□□□ -2.03
LRRC28-222ENST00000561431 TMEM167BQ9NRX6 74 aa2.36□□□□□ -2.03
LRRC28-222ENST00000561431 HERC2O95714 4834 aa2.36□□□□□ -2.03
LRRC28-222ENST00000561431 TRAV21A0A0B4J279 112 aa2.35□□□□□ -2.03
LRRC28-222ENST00000561431 RNASE3P12724 160 aaKnown RBP2.35□□□□□ -2.03
LRRC28-222ENST00000561431 CRIP1P50238 77 aa2.35□□□□□ -2.03
LRRC28-222ENST00000561431 CCL18P55774 89 aa2.35□□□□□ -2.03
LRRC28-222ENST00000561431 Q6ZRN7 208 aaPredicted RBP2.35□□□□□ -2.03
LRRC28-222ENST00000561431 PRO0255Q9UI72 69 aa2.35□□□□□ -2.03
LRRC28-222ENST00000561431 ARL2-SNX15V9GYD0 113 aa2.35□□□□□ -2.03
LRRC28-222ENST00000561431 DNAH17Q9UFH2 4485 aa2.35□□□□□ -2.03
LRRC28-222ENST00000561431 KIAA1109Q2LD37 5005 aa2.34□□□□□ -2.03
LRRC28-222ENST00000561431 PKHD1P08F94 4074 aa2.34□□□□□ -2.03
LRRC28-222ENST00000561431 TRBV10-1A0A0K0K1A3 114 aa2.34□□□□□ -2.03
LRRC28-222ENST00000561431 TRBV6-1A0A0K0K1D8 114 aa2.34□□□□□ -2.03
LRRC28-222ENST00000561431 SDHAF1A6NFY7 115 aa2.34□□□□□ -2.03
LRRC28-222ENST00000561431 C3orf79P0CE67 100 aa2.34□□□□□ -2.03
LRRC28-222ENST00000561431 UBE2D1P51668 147 aa2.34□□□□□ -2.03
LRRC28-222ENST00000561431 CDC42SE2Q9NRR3 84 aa2.34□□□□□ -2.03
LRRC28-222ENST00000561431 TRGV4A0A0C4DH28 118 aa2.33□□□□□ -2.04
LRRC28-222ENST00000561431 MYMXA0A1B0GTQ4 84 aa2.33□□□□□ -2.04
LRRC28-222ENST00000561431 LOC101927531A0A1B0GV80 90 aa2.33□□□□□ -2.04
LRRC28-222ENST00000561431 WFDC10BQ8IUB3 73 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms