RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 LAMTOR3Q9UHA4 124 aa10.12□□□□□ -0.79
TPM1-219ENST00000559397 NDUFV3P56181 108 aaKnown RBP10.11□□□□□ -0.79
TPM1-219ENST00000559397 VPS25Q9BRG1 176 aa10.1□□□□□ -0.79
TPM1-219ENST00000559397 CDIP1Q9H305 208 aa10.1□□□□□ -0.79
TPM1-219ENST00000559397 RBM3P98179 157 aaKnown RBP10.09□□□□□ -0.79
TPM1-219ENST00000559397 A0A1B0GV72 72 aa10.09□□□□□ -0.79
TPM1-219ENST00000559397 PLA2G1BP04054 148 aaKnown RBP10.09□□□□□ -0.79
TPM1-219ENST00000559397 UBE2AP49459 152 aa10.09□□□□□ -0.79
TPM1-219ENST00000559397 DEFB105AQ8NG35 78 aa10.09□□□□□ -0.79
TPM1-219ENST00000559397 LOC110117498A0A087WWA1 95 aa10.08□□□□□ -0.8
TPM1-219ENST00000559397 HIGD2AQ9BW72 106 aa10.08□□□□□ -0.8
TPM1-219ENST00000559397 IGLV7-43P04211 117 aa10.07□□□□□ -0.8
TPM1-219ENST00000559397 ACYP1P07311 99 aa10.07□□□□□ -0.8
TPM1-219ENST00000559397 SRRM2Q9UQ35 2752 aaKnown RBP10.07□□□□□ -0.8
TPM1-219ENST00000559397 CCKP06307 115 aa10.06□□□□□ -0.8
TPM1-219ENST00000559397 TRBV7-4A0A0J9YYF1 115 aa10.05□□□□□ -0.8
TPM1-219ENST00000559397 GAGE2AQ6NT46 116 aa10.05□□□□□ -0.8
TPM1-219ENST00000559397 Q6ZQT0 140 aa10.05□□□□□ -0.8
TPM1-219ENST00000559397 PDE6GP18545 87 aa10.04□□□□□ -0.8
TPM1-219ENST00000559397 ABCA13Q86UQ4 5058 aa10.04□□□□□ -0.8
TPM1-219ENST00000559397 DSCR8Q96T75 97 aa10.03□□□□□ -0.8
TPM1-219ENST00000559397 KRTAP4-5Q9BYR2 181 aa10.03□□□□□ -0.8
TPM1-219ENST00000559397 ZNF861PO60384 105 aa10.02□□□□□ -0.8
TPM1-219ENST00000559397 SMIM29Q86T20 159 aa10.02□□□□□ -0.8
TPM1-219ENST00000559397 SPRR1BP22528 89 aa10.02□□□□□ -0.81
TPM1-219ENST00000559397 FAT3Q8TDW7 4589 aa10.02□□□□□ -0.81
TPM1-219ENST00000559397 C3orf22Q8N5N4 141 aa10.01□□□□□ -0.81
TPM1-219ENST00000559397 C21orf62-AS1Q17RA5 79 aa9.99□□□□□ -0.81
TPM1-219ENST00000559397 SPINK6Q6UWN8 80 aa9.98□□□□□ -0.81
TPM1-219ENST00000559397 SIGMAR1Q99720 223 aa9.96□□□□□ -0.82
TPM1-219ENST00000559397 LINC00846Q9NV44 126 aa9.96□□□□□ -0.82
TPM1-219ENST00000559397 LRP1Q07954 4544 aaKnown RBP9.95□□□□□ -0.82
TPM1-219ENST00000559397 IGLV8-61A0A075B6I0 122 aa9.94□□□□□ -0.82
TPM1-219ENST00000559397 SPRR4Q96PI1 79 aa9.93□□□□□ -0.82
TPM1-219ENST00000559397 LINC00483Q53H64 154 aa9.93□□□□□ -0.82
TPM1-219ENST00000559397 MYCBP2O75592 4640 aa9.93□□□□□ -0.82
TPM1-219ENST00000559397 MT-ATP8P03928 68 aa9.92□□□□□ -0.82
TPM1-219ENST00000559397 F8WEM9 126 aa9.91□□□□□ -0.82
TPM1-219ENST00000559397 LINC00643Q86TS7 51 aa9.91□□□□□ -0.82
TPM1-219ENST00000559397 ZNF706Q9Y5V0 76 aaPredicted RBP9.91□□□□□ -0.82
TPM1-219ENST00000559397 TNXBP22105 4242 aa9.9□□□□□ -0.82
TPM1-219ENST00000559397 A0A1W2PNM2 257 aa9.88□□□□□ -0.83
TPM1-219ENST00000559397 A0A1B0GW54 56 aa9.87□□□□□ -0.83
TPM1-219ENST00000559397 KRTAP1-4P0C5Y4 121 aa9.87□□□□□ -0.83
TPM1-219ENST00000559397 IGFL1Q6UW32 110 aa9.87□□□□□ -0.83
TPM1-219ENST00000559397 Q8NBF4 154 aa9.87□□□□□ -0.83
TPM1-219ENST00000559397 PCLOQ9Y6V0 5065 aa9.85□□□□□ -0.83
TPM1-219ENST00000559397 Q6JHZ5 121 aa9.84□□□□□ -0.83
TPM1-219ENST00000559397 UBL5Q9BZL1 73 aa9.84□□□□□ -0.83
TPM1-219ENST00000559397 FLG2Q5D862 2391 aaPredicted RBP9.83□□□□□ -0.84
TPM1-219ENST00000559397 TRBV7-7A0A0K0K1E9 115 aa9.82□□□□□ -0.84
TPM1-219ENST00000559397 Q6ZVQ6 151 aa9.82□□□□□ -0.84
TPM1-219ENST00000559397 CRYGAP11844 174 aa9.81□□□□□ -0.84
TPM1-219ENST00000559397 ANAPC11Q9NYG5 84 aa9.81□□□□□ -0.84
TPM1-219ENST00000559397 A0A0G2JQZ4 141 aa9.8□□□□□ -0.84
TPM1-219ENST00000559397 Q6Q795 121 aa9.8□□□□□ -0.84
TPM1-219ENST00000559397 ATP5EP2Q5VTU8 51 aa9.78□□□□□ -0.84
TPM1-219ENST00000559397 IMUPQ9GZP8 106 aa9.78□□□□□ -0.84
TPM1-219ENST00000559397 FAM229BQ4G0N7 80 aa9.77□□□□□ -0.84
TPM1-219ENST00000559397 IGLV9-49A0A0B4J1Y8 123 aa9.77□□□□□ -0.85
TPM1-219ENST00000559397 A0A087X002 238 aa9.76□□□□□ -0.85
TPM1-219ENST00000559397 IGKV3D-7A0A0C4DH55 119 aa9.76□□□□□ -0.85
TPM1-219ENST00000559397 SCGB1A1P11684 91 aa9.76□□□□□ -0.85
TPM1-219ENST00000559397 OXTP01178 125 aa9.74□□□□□ -0.85
TPM1-219ENST00000559397 C9orf153Q5TBE3 101 aa9.74□□□□□ -0.85
TPM1-219ENST00000559397 NREPQ16612 68 aa9.74□□□□□ -0.85
TPM1-219ENST00000559397 PRR26Q8N8Z3 221 aa9.74□□□□□ -0.85
TPM1-219ENST00000559397 KRTAP29-1A8MX34 341 aaPredicted RBP9.73□□□□□ -0.85
TPM1-219ENST00000559397 KRTAP13-2Q52LG2 175 aa9.73□□□□□ -0.85
TPM1-219ENST00000559397 MOBPQ13875 183 aa9.72□□□□□ -0.85
TPM1-219ENST00000559397 CXCL6P80162 114 aa9.71□□□□□ -0.85
TPM1-219ENST00000559397 KRTAP10-8P60410 259 aa9.71□□□□□ -0.86
TPM1-219ENST00000559397 MT1HL1P0DM35 61 aa9.7□□□□□ -0.86
TPM1-219ENST00000559397 A0A087WSZ3 146 aa9.69□□□□□ -0.86
TPM1-219ENST00000559397 SSBP3-AS1Q7Z2R9 100 aa9.67□□□□□ -0.86
TPM1-219ENST00000559397 TYMSOSQ8TAI1 123 aa9.65□□□□□ -0.86
TPM1-219ENST00000559397 BPY2O14599 106 aa9.64□□□□□ -0.87
TPM1-219ENST00000559397 HIST1H4AP62805 103 aaKnown RBP9.61□□□□□ -0.87
TPM1-219ENST00000559397 CD164Q04900 197 aa9.61□□□□□ -0.87
TPM1-219ENST00000559397 A0A087WVE0 104 aa9.61□□□□□ -0.87
TPM1-219ENST00000559397 LINC00472Q9H8W2 130 aa9.6□□□□□ -0.87
TPM1-219ENST00000559397 J3QL48 77 aa9.59□□□□□ -0.87
TPM1-219ENST00000559397 HRCT1Q6UXD1 115 aa9.59□□□□□ -0.87
TPM1-219ENST00000559397 FAM236AA0A1B0GUQ0 79 aa9.58□□□□□ -0.88
TPM1-219ENST00000559397 FAM236BA0A1B0GV22 79 aa9.58□□□□□ -0.88
TPM1-219ENST00000559397 DSCR10P59022 87 aa9.58□□□□□ -0.88
TPM1-219ENST00000559397 PCP4P48539 62 aa9.58□□□□□ -0.88
TPM1-219ENST00000559397 IGKV4-1P06312 121 aa9.57□□□□□ -0.88
TPM1-219ENST00000559397 SS18L2Q9UHA2 77 aa9.57□□□□□ -0.88
TPM1-219ENST00000559397 Q8N9L7 120 aa9.55□□□□□ -0.88
TPM1-219ENST00000559397 LINC00304Q8N9R0 145 aa9.55□□□□□ -0.88
TPM1-219ENST00000559397 Q96NJ1 140 aa9.54□□□□□ -0.88
TPM1-219ENST00000559397 HERC1Q15751 4861 aa9.53□□□□□ -0.88
TPM1-219ENST00000559397 DEFB116Q30KQ4 102 aa9.53□□□□□ -0.88
TPM1-219ENST00000559397 DMBT1Q9UGM3 2413 aaPredicted RBP9.52□□□□□ -0.89
TPM1-219ENST00000559397 J3KT08 172 aa9.51□□□□□ -0.89
TPM1-219ENST00000559397 K7EQZ3 153 aa9.5□□□□□ -0.89
TPM1-219ENST00000559397 SPAG11AQ6PDA7 123 aa9.5□□□□□ -0.89
TPM1-219ENST00000559397 ASB16-AS1Q495Z4 193 aa9.49□□□□□ -0.89
TPM1-219ENST00000559397 Q5XG85 94 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms