RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 H3BT86 120 aa6.46□□□□□ -1.38
TDP1-211ENST00000555178 SPRR4Q96PI1 79 aa6.46□□□□□ -1.38
TDP1-211ENST00000555178 ETDBQ3ZM63 59 aa6.45□□□□□ -1.38
TDP1-211ENST00000555178 PLA2G1BP04054 148 aaKnown RBP6.45□□□□□ -1.38
TDP1-211ENST00000555178 SMIM29Q86T20 159 aa6.45□□□□□ -1.38
TDP1-211ENST00000555178 TMEM256-PLSCR3K7ERE1 68 aa6.44□□□□□ -1.38
TDP1-211ENST00000555178 TEX49A0A1B0GTD5 131 aa6.44□□□□□ -1.38
TDP1-211ENST00000555178 KRTAP1-4P0C5Y4 121 aa6.43□□□□□ -1.38
TDP1-211ENST00000555178 OCIAD2Q56VL3 154 aa6.43□□□□□ -1.38
TDP1-211ENST00000555178 LAMTOR3Q9UHA4 124 aa6.42□□□□□ -1.38
TDP1-211ENST00000555178 NDUFV3P56181 108 aaKnown RBP6.42□□□□□ -1.38
TDP1-211ENST00000555178 FAT3Q8TDW7 4589 aa6.42□□□□□ -1.38
TDP1-211ENST00000555178 A0A0G2JQZ4 141 aa6.41□□□□□ -1.38
TDP1-211ENST00000555178 LINC00483Q53H64 154 aa6.41□□□□□ -1.38
TDP1-211ENST00000555178 LINC01600Q96MT4 127 aa6.41□□□□□ -1.38
TDP1-211ENST00000555178 SPRR1BP22528 89 aa6.41□□□□□ -1.38
TDP1-211ENST00000555178 SPINK6Q6UWN8 80 aa6.41□□□□□ -1.38
TDP1-211ENST00000555178 TEN1Q86WV5 123 aa6.4□□□□□ -1.38
TDP1-211ENST00000555178 ZNF706Q9Y5V0 76 aaPredicted RBP6.4□□□□□ -1.38
TDP1-211ENST00000555178 A0A087X002 238 aa6.4□□□□□ -1.39
TDP1-211ENST00000555178 IGLV9-49A0A0B4J1Y8 123 aa6.4□□□□□ -1.39
TDP1-211ENST00000555178 C14orf132Q9NPU4 83 aa6.4□□□□□ -1.39
TDP1-211ENST00000555178 PCLOQ9Y6V0 5065 aa6.39□□□□□ -1.39
TDP1-211ENST00000555178 PPDPFLQ8WWR9 84 aa6.38□□□□□ -1.39
TDP1-211ENST00000555178 OBSCN-AS1Q96MR7 158 aa6.38□□□□□ -1.39
TDP1-211ENST00000555178 KRTAP13-2Q52LG2 175 aa6.37□□□□□ -1.39
TDP1-211ENST00000555178 TNXBP22105 4242 aa6.37□□□□□ -1.39
TDP1-211ENST00000555178 GHRHP01286 108 aa6.37□□□□□ -1.39
TDP1-211ENST00000555178 H3BQ85 93 aa6.36□□□□□ -1.39
TDP1-211ENST00000555178 MOBPQ13875 183 aa6.36□□□□□ -1.39
TDP1-211ENST00000555178 PRR26Q8N8Z3 221 aa6.36□□□□□ -1.39
TDP1-211ENST00000555178 RBM3P98179 157 aaKnown RBP6.35□□□□□ -1.39
TDP1-211ENST00000555178 C9orf153Q5TBE3 101 aa6.35□□□□□ -1.39
TDP1-211ENST00000555178 F8WEM9 126 aa6.35□□□□□ -1.39
TDP1-211ENST00000555178 JMJD7-PLA2G4BH0Y9G9 81 aa6.34□□□□□ -1.39
TDP1-211ENST00000555178 IGFL1Q6UW32 110 aa6.34□□□□□ -1.39
TDP1-211ENST00000555178 TRBV7-4A0A0J9YYF1 115 aa6.33□□□□□ -1.4
TDP1-211ENST00000555178 IGLV8-61A0A075B6I0 122 aa6.32□□□□□ -1.4
TDP1-211ENST00000555178 Q6ZQT0 140 aa6.32□□□□□ -1.4
TDP1-211ENST00000555178 DSCR8Q96T75 97 aa6.32□□□□□ -1.4
TDP1-211ENST00000555178 VPS25Q9BRG1 176 aa6.32□□□□□ -1.4
TDP1-211ENST00000555178 MT1HL1P0DM35 61 aa6.31□□□□□ -1.4
TDP1-211ENST00000555178 CRYGAP11844 174 aa6.31□□□□□ -1.4
TDP1-211ENST00000555178 FAM229BQ4G0N7 80 aa6.31□□□□□ -1.4
TDP1-211ENST00000555178 A0A1W2PNM2 257 aa6.3□□□□□ -1.4
TDP1-211ENST00000555178 Q8NBF4 154 aa6.3□□□□□ -1.4
TDP1-211ENST00000555178 LOC110117498A0A087WWA1 95 aa6.3□□□□□ -1.4
TDP1-211ENST00000555178 HRCT1Q6UXD1 115 aa6.3□□□□□ -1.4
TDP1-211ENST00000555178 CCKP06307 115 aa6.29□□□□□ -1.4
TDP1-211ENST00000555178 KRTAP10-8P60410 259 aa6.28□□□□□ -1.4
TDP1-211ENST00000555178 DMBT1Q9UGM3 2413 aaPredicted RBP6.27□□□□□ -1.41
TDP1-211ENST00000555178 TYMSOSQ8TAI1 123 aa6.27□□□□□ -1.41
TDP1-211ENST00000555178 Q6JHZ5 121 aa6.26□□□□□ -1.41
TDP1-211ENST00000555178 PDE6GP18545 87 aa6.23□□□□□ -1.41
TDP1-211ENST00000555178 SSBP3-AS1Q7Z2R9 100 aa6.23□□□□□ -1.41
TDP1-211ENST00000555178 A0A087WSZ3 146 aa6.23□□□□□ -1.41
TDP1-211ENST00000555178 LINC00846Q9NV44 126 aa6.23□□□□□ -1.41
TDP1-211ENST00000555178 KRTAP29-1A8MX34 341 aaPredicted RBP6.22□□□□□ -1.41
TDP1-211ENST00000555178 TRBV7-7A0A0K0K1E9 115 aa6.21□□□□□ -1.42
TDP1-211ENST00000555178 K7ERU9 68 aa6.21□□□□□ -1.42
TDP1-211ENST00000555178 OXTP01178 125 aa6.2□□□□□ -1.42
TDP1-211ENST00000555178 Q6Q795 121 aa6.2□□□□□ -1.42
TDP1-211ENST00000555178 J3QR89 54 aa6.19□□□□□ -1.42
TDP1-211ENST00000555178 LINC00304Q8N9R0 145 aa6.19□□□□□ -1.42
TDP1-211ENST00000555178 FAM240AA0A1B0GVK7 77 aa6.19□□□□□ -1.42
TDP1-211ENST00000555178 CDIP1Q9H305 208 aa6.17□□□□□ -1.42
TDP1-211ENST00000555178 DEFB116Q30KQ4 102 aa6.17□□□□□ -1.42
TDP1-211ENST00000555178 HERC1Q15751 4861 aa6.17□□□□□ -1.42
TDP1-211ENST00000555178 CD164Q04900 197 aa6.16□□□□□ -1.42
TDP1-211ENST00000555178 Q6ZVQ6 151 aa6.16□□□□□ -1.42
TDP1-211ENST00000555178 ACYP1P07311 99 aa6.15□□□□□ -1.43
TDP1-211ENST00000555178 C4orf48Q5BLP8 95 aa6.15□□□□□ -1.43
TDP1-211ENST00000555178 J3QL48 77 aa6.14□□□□□ -1.43
TDP1-211ENST00000555178 SPINK1P00995 79 aa6.13□□□□□ -1.43
TDP1-211ENST00000555178 NREPQ16612 68 aa6.13□□□□□ -1.43
TDP1-211ENST00000555178 Q96NJ1 140 aa6.13□□□□□ -1.43
TDP1-211ENST00000555178 RETNLBQ9BQ08 111 aa6.13□□□□□ -1.43
TDP1-211ENST00000555178 C21orf62-AS1Q17RA5 79 aa6.13□□□□□ -1.43
TDP1-211ENST00000555178 UBL5Q9BZL1 73 aa6.13□□□□□ -1.43
TDP1-211ENST00000555178 A0A1B0GW54 56 aa6.12□□□□□ -1.43
TDP1-211ENST00000555178 SPAG11AQ6PDA7 123 aa6.11□□□□□ -1.43
TDP1-211ENST00000555178 LINC00472Q9H8W2 130 aa6.11□□□□□ -1.43
TDP1-211ENST00000555178 IGKV3D-7A0A0C4DH55 119 aa6.1□□□□□ -1.43
TDP1-211ENST00000555178 SS18L2Q9UHA2 77 aa6.1□□□□□ -1.43
TDP1-211ENST00000555178 LIMD2Q9BT23 127 aa6.09□□□□□ -1.43
TDP1-211ENST00000555178 C1orf195Q5TG92 126 aa6.09□□□□□ -1.44
TDP1-211ENST00000555178 Q8N9L7 120 aa6.09□□□□□ -1.44
TDP1-211ENST00000555178 Q5XG85 94 aa6.08□□□□□ -1.44
TDP1-211ENST00000555178 MT-ATP8P03928 68 aa6.07□□□□□ -1.44
TDP1-211ENST00000555178 BPY2O14599 106 aa6.07□□□□□ -1.44
TDP1-211ENST00000555178 RPS29P62273 56 aaKnown RBP6.07□□□□□ -1.44
TDP1-211ENST00000555178 LINC00643Q86TS7 51 aa6.07□□□□□ -1.44
TDP1-211ENST00000555178 IGKV4-1P06312 121 aa6.06□□□□□ -1.44
TDP1-211ENST00000555178 DSCR10P59022 87 aa6.06□□□□□ -1.44
TDP1-211ENST00000555178 ASB16-AS1Q495Z4 193 aa6.06□□□□□ -1.44
TDP1-211ENST00000555178 SIGMAR1Q99720 223 aa6.06□□□□□ -1.44
TDP1-211ENST00000555178 LPAP08519 4548 aa6.05□□□□□ -1.44
TDP1-211ENST00000555178 K7EQZ3 153 aa6.04□□□□□ -1.44
TDP1-211ENST00000555178 CXCL6P80162 114 aa6.02□□□□□ -1.45
TDP1-211ENST00000555178 A0A087WVE0 104 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 169.8 ms