RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 MTURNQ8N3F0 131 aa10.48□□□□□ -0.73
LETMD1-220ENST00000549686 SMCPP49901 116 aaPredicted RBP10.46□□□□□ -0.73
LETMD1-220ENST00000549686 LAMTOR3Q9UHA4 124 aa10.46□□□□□ -0.73
LETMD1-220ENST00000549686 NDUFV3P56181 108 aaKnown RBP10.45□□□□□ -0.74
LETMD1-220ENST00000549686 FAM229BQ4G0N7 80 aa10.44□□□□□ -0.74
LETMD1-220ENST00000549686 F8WEM9 126 aa10.43□□□□□ -0.74
LETMD1-220ENST00000549686 JMJD7-PLA2G4BH0Y9G9 81 aa10.43□□□□□ -0.74
LETMD1-220ENST00000549686 SMIM29Q86T20 159 aa10.42□□□□□ -0.74
LETMD1-220ENST00000549686 TEN1Q86WV5 123 aa10.4□□□□□ -0.74
LETMD1-220ENST00000549686 KRTAP1-4P0C5Y4 121 aa10.39□□□□□ -0.75
LETMD1-220ENST00000549686 RBM3P98179 157 aaKnown RBP10.38□□□□□ -0.75
LETMD1-220ENST00000549686 C3orf22Q8N5N4 141 aa10.38□□□□□ -0.75
LETMD1-220ENST00000549686 OBSCN-AS1Q96MR7 158 aa10.38□□□□□ -0.75
LETMD1-220ENST00000549686 IGLV8-61A0A075B6I0 122 aa10.37□□□□□ -0.75
LETMD1-220ENST00000549686 CRYGAP11844 174 aa10.36□□□□□ -0.75
LETMD1-220ENST00000549686 C21orf62-AS1Q17RA5 79 aa10.36□□□□□ -0.75
LETMD1-220ENST00000549686 ETDBQ3ZM63 59 aa10.36□□□□□ -0.75
LETMD1-220ENST00000549686 Q6JHZ5 121 aa10.35□□□□□ -0.75
LETMD1-220ENST00000549686 ANAPC11Q9NYG5 84 aa10.35□□□□□ -0.75
LETMD1-220ENST00000549686 PDE6GP18545 87 aa10.34□□□□□ -0.75
LETMD1-220ENST00000549686 Q8NBF4 154 aa10.34□□□□□ -0.75
LETMD1-220ENST00000549686 DSCR8Q96T75 97 aa10.34□□□□□ -0.75
LETMD1-220ENST00000549686 SRRM2Q9UQ35 2752 aaKnown RBP10.34□□□□□ -0.75
LETMD1-220ENST00000549686 PKHD1L1Q86WI1 4243 aa10.34□□□□□ -0.75
LETMD1-220ENST00000549686 KRTAP17-1Q9BYP8 105 aa10.33□□□□□ -0.76
LETMD1-220ENST00000549686 IGLV9-49A0A0B4J1Y8 123 aa10.32□□□□□ -0.76
LETMD1-220ENST00000549686 C9orf153Q5TBE3 101 aa10.32□□□□□ -0.76
LETMD1-220ENST00000549686 LOC110117498A0A087WWA1 95 aa10.31□□□□□ -0.76
LETMD1-220ENST00000549686 TRBV7-4A0A0J9YYF1 115 aa10.31□□□□□ -0.76
LETMD1-220ENST00000549686 SSBP3-AS1Q7Z2R9 100 aa10.31□□□□□ -0.76
LETMD1-220ENST00000549686 A0A1B0GV72 72 aa10.3□□□□□ -0.76
LETMD1-220ENST00000549686 MOBPQ13875 183 aa10.3□□□□□ -0.76
LETMD1-220ENST00000549686 HERC2O95714 4834 aa10.3□□□□□ -0.76
LETMD1-220ENST00000549686 A0A087X002 238 aa10.29□□□□□ -0.76
LETMD1-220ENST00000549686 C14orf132Q9NPU4 83 aa10.29□□□□□ -0.76
LETMD1-220ENST00000549686 KRTAP13-2Q52LG2 175 aa10.26□□□□□ -0.77
LETMD1-220ENST00000549686 IGFL1Q6UW32 110 aa10.26□□□□□ -0.77
LETMD1-220ENST00000549686 Q6ZQT0 140 aa10.25□□□□□ -0.77
LETMD1-220ENST00000549686 TYMSOSQ8TAI1 123 aa10.25□□□□□ -0.77
LETMD1-220ENST00000549686 PRR26Q8N8Z3 221 aa10.24□□□□□ -0.77
LETMD1-220ENST00000549686 A0A1B0GW54 56 aa10.22□□□□□ -0.77
LETMD1-220ENST00000549686 CCKP06307 115 aa10.22□□□□□ -0.77
LETMD1-220ENST00000549686 Q6Q795 121 aa10.22□□□□□ -0.77
LETMD1-220ENST00000549686 J3QR89 54 aa10.21□□□□□ -0.77
LETMD1-220ENST00000549686 CD164Q04900 197 aa10.21□□□□□ -0.77
LETMD1-220ENST00000549686 OXTP01178 125 aa10.19□□□□□ -0.78
LETMD1-220ENST00000549686 A0A1W2PNM2 257 aa10.18□□□□□ -0.78
LETMD1-220ENST00000549686 VPS25Q9BRG1 176 aa10.18□□□□□ -0.78
LETMD1-220ENST00000549686 KRTAP4-5Q9BYR2 181 aa10.18□□□□□ -0.78
LETMD1-220ENST00000549686 C4orf48Q5BLP8 95 aa10.17□□□□□ -0.78
LETMD1-220ENST00000549686 SPAG11AQ6PDA7 123 aa10.17□□□□□ -0.78
LETMD1-220ENST00000549686 ACYP1P07311 99 aa10.15□□□□□ -0.78
LETMD1-220ENST00000549686 A0A0G2JQZ4 141 aa10.14□□□□□ -0.79
LETMD1-220ENST00000549686 FAM240AA0A1B0GVK7 77 aa10.14□□□□□ -0.79
LETMD1-220ENST00000549686 KRTAP10-8P60410 259 aa10.14□□□□□ -0.79
LETMD1-220ENST00000549686 LINC00304Q8N9R0 145 aa10.14□□□□□ -0.79
LETMD1-220ENST00000549686 TRBV7-7A0A0K0K1E9 115 aa10.13□□□□□ -0.79
LETMD1-220ENST00000549686 K7ERU9 68 aa10.12□□□□□ -0.79
LETMD1-220ENST00000549686 SPINK1P00995 79 aa10.12□□□□□ -0.79
LETMD1-220ENST00000549686 RPS29P62273 56 aaKnown RBP10.11□□□□□ -0.79
LETMD1-220ENST00000549686 FAT3Q8TDW7 4589 aa10.1□□□□□ -0.79
LETMD1-220ENST00000549686 KRTAP29-1A8MX34 341 aaPredicted RBP10.1□□□□□ -0.79
LETMD1-220ENST00000549686 SS18L2Q9UHA2 77 aa10.1□□□□□ -0.79
LETMD1-220ENST00000549686 HRCT1Q6UXD1 115 aa10.09□□□□□ -0.79
LETMD1-220ENST00000549686 FLG2Q5D862 2391 aaPredicted RBP10.09□□□□□ -0.79
LETMD1-220ENST00000549686 A0A087WSZ3 146 aa10.08□□□□□ -0.8
LETMD1-220ENST00000549686 Q5XG85 94 aa10.08□□□□□ -0.8
LETMD1-220ENST00000549686 LIMD2Q9BT23 127 aa10.08□□□□□ -0.8
LETMD1-220ENST00000549686 ABCA13Q86UQ4 5058 aa10.06□□□□□ -0.8
LETMD1-220ENST00000549686 LRP1Q07954 4544 aaKnown RBP10.06□□□□□ -0.8
LETMD1-220ENST00000549686 MT1HL1P0DM35 61 aa10.04□□□□□ -0.8
LETMD1-220ENST00000549686 UBL5Q9BZL1 73 aa10.04□□□□□ -0.8
LETMD1-220ENST00000549686 TNXBP22105 4242 aa10.03□□□□□ -0.8
LETMD1-220ENST00000549686 ASB16-AS1Q495Z4 193 aa10.03□□□□□ -0.8
LETMD1-220ENST00000549686 LINC00846Q9NV44 126 aa10.03□□□□□ -0.8
LETMD1-220ENST00000549686 MYCBP2O75592 4640 aa10.03□□□□□ -0.8
LETMD1-220ENST00000549686 NREPQ16612 68 aa10.01□□□□□ -0.81
LETMD1-220ENST00000549686 Q6ZVQ6 151 aa9.97□□□□□ -0.81
LETMD1-220ENST00000549686 J3QL48 77 aa9.96□□□□□ -0.82
LETMD1-220ENST00000549686 LINC00472Q9H8W2 130 aa9.94□□□□□ -0.82
LETMD1-220ENST00000549686 J3KT08 172 aa9.93□□□□□ -0.82
LETMD1-220ENST00000549686 LINC00643Q86TS7 51 aa9.92□□□□□ -0.82
LETMD1-220ENST00000549686 ATP5EP2Q5VTU8 51 aa9.91□□□□□ -0.82
LETMD1-220ENST00000549686 SIGMAR1Q99720 223 aa9.9□□□□□ -0.82
LETMD1-220ENST00000549686 BPY2O14599 106 aa9.89□□□□□ -0.83
LETMD1-220ENST00000549686 C1orf195Q5TG92 126 aa9.89□□□□□ -0.83
LETMD1-220ENST00000549686 Q96NJ1 140 aa9.89□□□□□ -0.83
LETMD1-220ENST00000549686 CDIP1Q9H305 208 aa9.89□□□□□ -0.83
LETMD1-220ENST00000549686 CXCL6P80162 114 aa9.88□□□□□ -0.83
LETMD1-220ENST00000549686 DMBT1Q9UGM3 2413 aaPredicted RBP9.87□□□□□ -0.83
LETMD1-220ENST00000549686 IGKV4-1P06312 121 aa9.86□□□□□ -0.83
LETMD1-220ENST00000549686 PCLOQ9Y6V0 5065 aa9.84□□□□□ -0.83
LETMD1-220ENST00000549686 DEFB116Q30KQ4 102 aa9.83□□□□□ -0.84
LETMD1-220ENST00000549686 FP248Q71RG6 208 aaPredicted RBP9.83□□□□□ -0.84
LETMD1-220ENST00000549686 NDUFB1O75438 58 aa9.82□□□□□ -0.84
LETMD1-220ENST00000549686 A8MWP4 228 aa9.81□□□□□ -0.84
LETMD1-220ENST00000549686 DSCR10P59022 87 aa9.8□□□□□ -0.84
LETMD1-220ENST00000549686 IGKV3D-7A0A0C4DH55 119 aa9.78□□□□□ -0.84
LETMD1-220ENST00000549686 RETNLBQ9BQ08 111 aa9.77□□□□□ -0.85
LETMD1-220ENST00000549686 PRR15Q8IV56 129 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms