RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 PRO0461Q9UI25 63 aa17.23■□□□□ 0.35
BRF1-213ENST00000548421 ANKRD29Q8N6D5 301 aa17.21■□□□□ 0.35
BRF1-213ENST00000548421 KRTAP1-4P0C5Y4 121 aa17.19■□□□□ 0.34
BRF1-213ENST00000548421 ANAPC11Q9NYG5 84 aa17.19■□□□□ 0.34
BRF1-213ENST00000548421 SMIM29Q86T20 159 aa17.18■□□□□ 0.34
BRF1-213ENST00000548421 C3orf22Q8N5N4 141 aa17.18■□□□□ 0.34
BRF1-213ENST00000548421 F8W1H4 67 aa17.18■□□□□ 0.34
BRF1-213ENST00000548421 SMCPP49901 116 aaPredicted RBP17.18■□□□□ 0.34
BRF1-213ENST00000548421 LAMTOR3Q9UHA4 124 aa17.17■□□□□ 0.34
BRF1-213ENST00000548421 NDUFV3P56181 108 aaKnown RBP17.15■□□□□ 0.34
BRF1-213ENST00000548421 FAM229BQ4G0N7 80 aa17.15■□□□□ 0.34
BRF1-213ENST00000548421 LINC01600Q96MT4 127 aa17.15■□□□□ 0.34
BRF1-213ENST00000548421 F8WEM9 126 aa17.11■□□□□ 0.33
BRF1-213ENST00000548421 KRTAP4-5Q9BYR2 181 aa17.08■□□□□ 0.32
BRF1-213ENST00000548421 PCLOQ9Y6V0 5065 aa17.07■□□□□ 0.32
BRF1-213ENST00000548421 A0A087X002 238 aa17.07■□□□□ 0.32
BRF1-213ENST00000548421 IGLV9-49A0A0B4J1Y8 123 aa17.07■□□□□ 0.32
BRF1-213ENST00000548421 CRYGAP11844 174 aa17.07■□□□□ 0.32
BRF1-213ENST00000548421 A0A1B0GV72 72 aa17.05■□□□□ 0.32
BRF1-213ENST00000548421 JMJD7-PLA2G4BH0Y9G9 81 aa17.03■□□□□ 0.32
BRF1-213ENST00000548421 C9orf153Q5TBE3 101 aa17.03■□□□□ 0.32
BRF1-213ENST00000548421 IGLV8-61A0A075B6I0 122 aa17■□□□□ 0.31
BRF1-213ENST00000548421 MOBPQ13875 183 aa17■□□□□ 0.31
BRF1-213ENST00000548421 KRTAP13-2Q52LG2 175 aa17■□□□□ 0.31
BRF1-213ENST00000548421 RBM3P98179 157 aaKnown RBP16.99■□□□□ 0.31
BRF1-213ENST00000548421 Q8NBF4 154 aa16.99■□□□□ 0.31
BRF1-213ENST00000548421 OBSCN-AS1Q96MR7 158 aa16.99■□□□□ 0.31
BRF1-213ENST00000548421 TEN1Q86WV5 123 aa16.99■□□□□ 0.31
BRF1-213ENST00000548421 PRR26Q8N8Z3 221 aa16.98■□□□□ 0.31
BRF1-213ENST00000548421 ETDBQ3ZM63 59 aa16.97■□□□□ 0.31
BRF1-213ENST00000548421 FLG2Q5D862 2391 aaPredicted RBP16.95■□□□□ 0.3
BRF1-213ENST00000548421 FAT3Q8TDW7 4589 aa16.94■□□□□ 0.3
BRF1-213ENST00000548421 Q6JHZ5 121 aa16.94■□□□□ 0.3
BRF1-213ENST00000548421 LRP1Q07954 4544 aaKnown RBP16.94■□□□□ 0.3
BRF1-213ENST00000548421 DSCR8Q96T75 97 aa16.93■□□□□ 0.3
BRF1-213ENST00000548421 SSBP3-AS1Q7Z2R9 100 aa16.92■□□□□ 0.3
BRF1-213ENST00000548421 TYMSOSQ8TAI1 123 aa16.92■□□□□ 0.3
BRF1-213ENST00000548421 C14orf132Q9NPU4 83 aa16.91■□□□□ 0.3
BRF1-213ENST00000548421 TRBV7-4A0A0J9YYF1 115 aa16.9■□□□□ 0.3
BRF1-213ENST00000548421 IGFL1Q6UW32 110 aa16.9■□□□□ 0.3
BRF1-213ENST00000548421 MYCBP2O75592 4640 aa16.9■□□□□ 0.3
BRF1-213ENST00000548421 ABCA13Q86UQ4 5058 aa16.89■□□□□ 0.29
BRF1-213ENST00000548421 LOC110117498A0A087WWA1 95 aa16.86■□□□□ 0.29
BRF1-213ENST00000548421 A0A0G2JQZ4 141 aa16.85■□□□□ 0.29
BRF1-213ENST00000548421 PDE6GP18545 87 aa16.84■□□□□ 0.29
BRF1-213ENST00000548421 OXTP01178 125 aa16.81■□□□□ 0.28
BRF1-213ENST00000548421 Q6ZQT0 140 aa16.81■□□□□ 0.28
BRF1-213ENST00000548421 TNXBP22105 4242 aa16.81■□□□□ 0.28
BRF1-213ENST00000548421 KRTAP10-8P60410 259 aa16.79■□□□□ 0.28
BRF1-213ENST00000548421 CCKP06307 115 aa16.78■□□□□ 0.28
BRF1-213ENST00000548421 C21orf62-AS1Q17RA5 79 aa16.76■□□□□ 0.27
BRF1-213ENST00000548421 A0A1W2PNM2 257 aa16.75■□□□□ 0.27
BRF1-213ENST00000548421 VPS25Q9BRG1 176 aa16.75■□□□□ 0.27
BRF1-213ENST00000548421 Q6Q795 121 aa16.73■□□□□ 0.27
BRF1-213ENST00000548421 CD164Q04900 197 aa16.73■□□□□ 0.27
BRF1-213ENST00000548421 LINC00304Q8N9R0 145 aa16.73■□□□□ 0.27
BRF1-213ENST00000548421 HRCT1Q6UXD1 115 aa16.72■□□□□ 0.27
BRF1-213ENST00000548421 KRTAP29-1A8MX34 341 aaPredicted RBP16.71■□□□□ 0.27
BRF1-213ENST00000548421 C4orf48Q5BLP8 95 aa16.7■□□□□ 0.26
BRF1-213ENST00000548421 MT1HL1P0DM35 61 aa16.69■□□□□ 0.26
BRF1-213ENST00000548421 SPAG11AQ6PDA7 123 aa16.67■□□□□ 0.26
BRF1-213ENST00000548421 TRBV7-7A0A0K0K1E9 115 aa16.66■□□□□ 0.26
BRF1-213ENST00000548421 SPINK1P00995 79 aa16.63■□□□□ 0.25
BRF1-213ENST00000548421 A0A1B0GW54 56 aa16.62■□□□□ 0.25
BRF1-213ENST00000548421 A0A087WSZ3 146 aa16.6■□□□□ 0.25
BRF1-213ENST00000548421 RPS29P62273 56 aaKnown RBP16.56■□□□□ 0.24
BRF1-213ENST00000548421 J3QR89 54 aa16.55■□□□□ 0.24
BRF1-213ENST00000548421 LIMD2Q9BT23 127 aa16.54■□□□□ 0.24
BRF1-213ENST00000548421 SS18L2Q9UHA2 77 aa16.53■□□□□ 0.24
BRF1-213ENST00000548421 J3QL48 77 aa16.52■□□□□ 0.23
BRF1-213ENST00000548421 Q5XG85 94 aa16.51■□□□□ 0.23
BRF1-213ENST00000548421 FAM240AA0A1B0GVK7 77 aa16.5■□□□□ 0.23
BRF1-213ENST00000548421 ACYP1P07311 99 aa16.49■□□□□ 0.23
BRF1-213ENST00000548421 DMBT1Q9UGM3 2413 aaPredicted RBP16.49■□□□□ 0.23
BRF1-213ENST00000548421 LINC00846Q9NV44 126 aa16.46■□□□□ 0.23
BRF1-213ENST00000548421 K7ERU9 68 aa16.43■□□□□ 0.22
BRF1-213ENST00000548421 ASB16-AS1Q495Z4 193 aa16.43■□□□□ 0.22
BRF1-213ENST00000548421 NREPQ16612 68 aa16.4■□□□□ 0.22
BRF1-213ENST00000548421 UBL5Q9BZL1 73 aa16.39■□□□□ 0.21
BRF1-213ENST00000548421 Q6ZVQ6 151 aa16.36■□□□□ 0.21
BRF1-213ENST00000548421 LINC00472Q9H8W2 130 aa16.34■□□□□ 0.21
BRF1-213ENST00000548421 Q96NJ1 140 aa16.33■□□□□ 0.2
BRF1-213ENST00000548421 C1orf195Q5TG92 126 aa16.32■□□□□ 0.2
BRF1-213ENST00000548421 DEFB116Q30KQ4 102 aa16.26■□□□□ 0.19
BRF1-213ENST00000548421 RETNLBQ9BQ08 111 aa16.26■□□□□ 0.19
BRF1-213ENST00000548421 HERC1Q15751 4861 aa16.25■□□□□ 0.19
BRF1-213ENST00000548421 J3KT08 172 aa16.22■□□□□ 0.19
BRF1-213ENST00000548421 IGKV4-1P06312 121 aa16.22■□□□□ 0.19
BRF1-213ENST00000548421 SIGMAR1Q99720 223 aa16.21■□□□□ 0.19
BRF1-213ENST00000548421 BPY2O14599 106 aa16.2■□□□□ 0.18
BRF1-213ENST00000548421 CDIP1Q9H305 208 aa16.19■□□□□ 0.18
BRF1-213ENST00000548421 LINC00643Q86TS7 51 aa16.16■□□□□ 0.18
BRF1-213ENST00000548421 FP248Q71RG6 208 aaPredicted RBP16.14■□□□□ 0.17
BRF1-213ENST00000548421 CXCL6P80162 114 aa16.11■□□□□ 0.17
BRF1-213ENST00000548421 ATP5EP2Q5VTU8 51 aa16.11■□□□□ 0.17
BRF1-213ENST00000548421 DSCR10P59022 87 aa16.1■□□□□ 0.17
BRF1-213ENST00000548421 A8MWP4 228 aa16.09■□□□□ 0.17
BRF1-213ENST00000548421 IGKV3D-7A0A0C4DH55 119 aa16.06■□□□□ 0.16
BRF1-213ENST00000548421 NDUFB1O75438 58 aa16.06■□□□□ 0.16
BRF1-213ENST00000548421 PRR4Q16378 134 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms