RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 PRR26Q8N8Z3 221 aa13.72□□□□□ -0.21
HOMER3-205ENST00000542541 LAMTOR3Q9UHA4 124 aa13.72□□□□□ -0.21
HOMER3-205ENST00000542541 A0A087X002 238 aa13.7□□□□□ -0.22
HOMER3-205ENST00000542541 KRTAP29-1A8MX34 341 aaPredicted RBP13.7□□□□□ -0.22
HOMER3-205ENST00000542541 H3BQ85 93 aa13.7□□□□□ -0.22
HOMER3-205ENST00000542541 ORMDL1Q9P0S3 153 aa13.7□□□□□ -0.22
HOMER3-205ENST00000542541 KRTAP13-2Q52LG2 175 aa13.64□□□□□ -0.23
HOMER3-205ENST00000542541 SMIM29Q86T20 159 aa13.64□□□□□ -0.23
HOMER3-205ENST00000542541 TYMSOSQ8TAI1 123 aa13.64□□□□□ -0.23
HOMER3-205ENST00000542541 SPCS1Q9Y6A9 102 aa13.64□□□□□ -0.23
HOMER3-205ENST00000542541 IGLV9-49A0A0B4J1Y8 123 aa13.64□□□□□ -0.23
HOMER3-205ENST00000542541 TMEM256-PLSCR3K7ERE1 68 aa13.64□□□□□ -0.23
HOMER3-205ENST00000542541 KRTAP10-8P60410 259 aa13.64□□□□□ -0.23
HOMER3-205ENST00000542541 F8WEM9 126 aa13.62□□□□□ -0.23
HOMER3-205ENST00000542541 C3orf22Q8N5N4 141 aa13.62□□□□□ -0.23
HOMER3-205ENST00000542541 C9orf153Q5TBE3 101 aa13.61□□□□□ -0.23
HOMER3-205ENST00000542541 MOBPQ13875 183 aa13.6□□□□□ -0.23
HOMER3-205ENST00000542541 SSBP3-AS1Q7Z2R9 100 aa13.6□□□□□ -0.23
HOMER3-205ENST00000542541 J3QL48 77 aa13.59□□□□□ -0.23
HOMER3-205ENST00000542541 BAALC-AS2P0C853 105 aa13.59□□□□□ -0.23
HOMER3-205ENST00000542541 Q8NBF4 154 aa13.58□□□□□ -0.24
HOMER3-205ENST00000542541 H3BMG7 143 aa13.57□□□□□ -0.24
HOMER3-205ENST00000542541 MT1HL1P0DM35 61 aa13.57□□□□□ -0.24
HOMER3-205ENST00000542541 NDUFV3P56181 108 aaKnown RBP13.57□□□□□ -0.24
HOMER3-205ENST00000542541 C9JAW5 83 aa13.56□□□□□ -0.24
HOMER3-205ENST00000542541 UBE2V1Q13404 147 aa13.55□□□□□ -0.24
HOMER3-205ENST00000542541 K7EP34 96 aa13.54□□□□□ -0.24
HOMER3-205ENST00000542541 GTF2H5Q6ZYL4 71 aa13.53□□□□□ -0.24
HOMER3-205ENST00000542541 IGLV8-61A0A075B6I0 122 aa13.51□□□□□ -0.25
HOMER3-205ENST00000542541 TNXBP22105 4242 aa13.51□□□□□ -0.25
HOMER3-205ENST00000542541 Q6JHZ5 121 aa13.5□□□□□ -0.25
HOMER3-205ENST00000542541 ANKRD29Q8N6D5 301 aa13.5□□□□□ -0.25
HOMER3-205ENST00000542541 LINC00304Q8N9R0 145 aa13.49□□□□□ -0.25
HOMER3-205ENST00000542541 H3BT86 120 aa13.48□□□□□ -0.25
HOMER3-205ENST00000542541 C4orf48Q5BLP8 95 aa13.48□□□□□ -0.25
HOMER3-205ENST00000542541 SPAG11AQ6PDA7 123 aa13.46□□□□□ -0.25
HOMER3-205ENST00000542541 DMBT1Q9UGM3 2413 aaPredicted RBP13.46□□□□□ -0.26
HOMER3-205ENST00000542541 MTURNQ8N3F0 131 aa13.42□□□□□ -0.26
HOMER3-205ENST00000542541 JMJD7-PLA2G4BH0Y9G9 81 aa13.41□□□□□ -0.26
HOMER3-205ENST00000542541 RBM3P98179 157 aaKnown RBP13.41□□□□□ -0.26
HOMER3-205ENST00000542541 IGFL1Q6UW32 110 aa13.41□□□□□ -0.26
HOMER3-205ENST00000542541 SPINK1P00995 79 aa13.39□□□□□ -0.27
HOMER3-205ENST00000542541 CD164Q04900 197 aa13.39□□□□□ -0.27
HOMER3-205ENST00000542541 A0A1B0GV72 72 aa13.39□□□□□ -0.27
HOMER3-205ENST00000542541 A0A0G2JQZ4 141 aa13.37□□□□□ -0.27
HOMER3-205ENST00000542541 DSCR8Q96T75 97 aa13.36□□□□□ -0.27
HOMER3-205ENST00000542541 PRO0461Q9UI25 63 aa13.36□□□□□ -0.27
HOMER3-205ENST00000542541 HERC1Q15751 4861 aa13.36□□□□□ -0.27
HOMER3-205ENST00000542541 F8W1H4 67 aa13.35□□□□□ -0.27
HOMER3-205ENST00000542541 A0A1B0GV90 55 aa13.35□□□□□ -0.27
HOMER3-205ENST00000542541 HRCT1Q6UXD1 115 aa13.35□□□□□ -0.27
HOMER3-205ENST00000542541 SMCPP49901 116 aaPredicted RBP13.33□□□□□ -0.28
HOMER3-205ENST00000542541 RPS29P62273 56 aaKnown RBP13.33□□□□□ -0.28
HOMER3-205ENST00000542541 TRBV7-4A0A0J9YYF1 115 aa13.31□□□□□ -0.28
HOMER3-205ENST00000542541 TEN1Q86WV5 123 aa13.31□□□□□ -0.28
HOMER3-205ENST00000542541 OBSCN-AS1Q96MR7 158 aa13.31□□□□□ -0.28
HOMER3-205ENST00000542541 PDE6GP18545 87 aa13.29□□□□□ -0.28
HOMER3-205ENST00000542541 Q6Q795 121 aa13.29□□□□□ -0.28
HOMER3-205ENST00000542541 LIMD2Q9BT23 127 aa13.28□□□□□ -0.28
HOMER3-205ENST00000542541 TRBV7-7A0A0K0K1E9 115 aa13.26□□□□□ -0.29
HOMER3-205ENST00000542541 CCKP06307 115 aa13.26□□□□□ -0.29
HOMER3-205ENST00000542541 LOC110117498A0A087WWA1 95 aa13.25□□□□□ -0.29
HOMER3-205ENST00000542541 C14orf132Q9NPU4 83 aa13.25□□□□□ -0.29
HOMER3-205ENST00000542541 A0A1W2PNM2 257 aa13.24□□□□□ -0.29
HOMER3-205ENST00000542541 C21orf62-AS1Q17RA5 79 aa13.24□□□□□ -0.29
HOMER3-205ENST00000542541 Q5XG85 94 aa13.22□□□□□ -0.29
HOMER3-205ENST00000542541 Q6ZQT0 140 aa13.21□□□□□ -0.29
HOMER3-205ENST00000542541 VPS25Q9BRG1 176 aa13.21□□□□□ -0.29
HOMER3-205ENST00000542541 SS18L2Q9UHA2 77 aa13.17□□□□□ -0.3
HOMER3-205ENST00000542541 ETDBQ3ZM63 59 aa13.17□□□□□ -0.3
HOMER3-205ENST00000542541 A0A087WSZ3 146 aa13.16□□□□□ -0.3
HOMER3-205ENST00000542541 A0A1B0GW54 56 aa13.15□□□□□ -0.3
HOMER3-205ENST00000542541 ASB16-AS1Q495Z4 193 aa13.12□□□□□ -0.31
HOMER3-205ENST00000542541 RETNLBQ9BQ08 111 aa13.11□□□□□ -0.31
HOMER3-205ENST00000542541 FP248Q71RG6 208 aaPredicted RBP13.06□□□□□ -0.32
HOMER3-205ENST00000542541 PRR4Q16378 134 aa13.06□□□□□ -0.32
HOMER3-205ENST00000542541 C1orf195Q5TG92 126 aa13.05□□□□□ -0.32
HOMER3-205ENST00000542541 HMCN2Q8NDA2 5059 aa13.03□□□□□ -0.32
HOMER3-205ENST00000542541 IGLV7-46A0A075B6I9 117 aa12.99□□□□□ -0.33
HOMER3-205ENST00000542541 NREPQ16612 68 aa12.95□□□□□ -0.34
HOMER3-205ENST00000542541 Q96NJ1 140 aa12.94□□□□□ -0.34
HOMER3-205ENST00000542541 LINC00472Q9H8W2 130 aa12.94□□□□□ -0.34
HOMER3-205ENST00000542541 J3KT08 172 aa12.88□□□□□ -0.35
HOMER3-205ENST00000542541 IGKV4-1P06312 121 aa12.88□□□□□ -0.35
HOMER3-205ENST00000542541 ACYP1P07311 99 aa12.87□□□□□ -0.35
HOMER3-205ENST00000542541 DEFB116Q30KQ4 102 aa12.87□□□□□ -0.35
HOMER3-205ENST00000542541 LINC00846Q9NV44 126 aa12.87□□□□□ -0.35
HOMER3-205ENST00000542541 SIGMAR1Q99720 223 aa12.86□□□□□ -0.35
HOMER3-205ENST00000542541 UBL5Q9BZL1 73 aa12.86□□□□□ -0.35
HOMER3-205ENST00000542541 TPRXLQ17RH7 258 aa12.85□□□□□ -0.35
HOMER3-205ENST00000542541 FAM240AA0A1B0GVK7 77 aa12.84□□□□□ -0.35
HOMER3-205ENST00000542541 Q6ZVQ6 151 aa12.84□□□□□ -0.35
HOMER3-205ENST00000542541 J3QR89 54 aa12.81□□□□□ -0.36
HOMER3-205ENST00000542541 KRTAP13-3Q3SY46 172 aa12.8□□□□□ -0.36
HOMER3-205ENST00000542541 NDUFB1O75438 58 aa12.77□□□□□ -0.37
HOMER3-205ENST00000542541 LPAP08519 4548 aa12.76□□□□□ -0.37
HOMER3-205ENST00000542541 BPY2O14599 106 aa12.76□□□□□ -0.37
HOMER3-205ENST00000542541 CDIP1Q9H305 208 aa12.76□□□□□ -0.37
HOMER3-205ENST00000542541 LRP2P98164 4655 aa12.73□□□□□ -0.37
HOMER3-205ENST00000542541 C9orf92A6NGG3 77 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms