RNA–Protein interactions for RNA: ENST00000533585.5

C11orf54-213, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 4

Gene C11orf54, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-213ENST00000533585 SPINK4O60575 86 aa1.61□□□□□ -2.15
C11orf54-213ENST00000533585 DEFB109BQ30KR1 87 aa1.61□□□□□ -2.15
C11orf54-213ENST00000533585 VPS13AQ96RL7 3174 aa1.61□□□□□ -2.15
C11orf54-213ENST00000533585 PIEZO2Q9H5I5 2752 aa1.6□□□□□ -2.15
C11orf54-213ENST00000533585 ROS1P08922 2347 aa1.6□□□□□ -2.15
C11orf54-213ENST00000533585 DEFB131BA0A096LNP1 70 aa1.6□□□□□ -2.15
C11orf54-213ENST00000533585 CRIP1P50238 77 aa1.6□□□□□ -2.15
C11orf54-213ENST00000533585 DEFB108BQ8NET1 73 aa1.6□□□□□ -2.15
C11orf54-213ENST00000533585 PRUNE2Q8WUY3 3088 aa1.59□□□□□ -2.15
C11orf54-213ENST00000533585 MAP1BP46821 2468 aaKnown RBP1.59□□□□□ -2.15
C11orf54-213ENST00000533585 NBEAQ8NFP9 2946 aa1.59□□□□□ -2.15
C11orf54-213ENST00000533585 ANKHD1Q8IWZ3 2542 aaKnown RBP1.59□□□□□ -2.15
C11orf54-213ENST00000533585 POLR2KP53803 58 aaKnown RBP1.59□□□□□ -2.15
C11orf54-213ENST00000533585 LEAP2Q969E1 77 aa1.59□□□□□ -2.15
C11orf54-213ENST00000533585 TPRP12270 2363 aaKnown RBP1.59□□□□□ -2.16
C11orf54-213ENST00000533585 COL6A6A6NMZ7 2263 aa1.59□□□□□ -2.16
C11orf54-213ENST00000533585 WNK2Q9Y3S1 2297 aa1.59□□□□□ -2.16
C11orf54-213ENST00000533585 IGIPA6NJ69 53 aa1.58□□□□□ -2.16
C11orf54-213ENST00000533585 H0YGX0 51 aa1.58□□□□□ -2.16
C11orf54-213ENST00000533585 COX6B1P14854 86 aa1.58□□□□□ -2.16
C11orf54-213ENST00000533585 BDP1A6H8Y1 2624 aa1.58□□□□□ -2.16
C11orf54-213ENST00000533585 SPTBN5Q9NRC6 3674 aaKnown RBP1.58□□□□□ -2.16
C11orf54-213ENST00000533585 DSPP15924 2871 aaKnown RBP1.57□□□□□ -2.16
C11orf54-213ENST00000533585 CACNA1HO95180 2353 aa1.57□□□□□ -2.16
C11orf54-213ENST00000533585 FREM2Q5SZK8 3169 aa1.57□□□□□ -2.16
C11orf54-213ENST00000533585 A8MTW9 85 aa1.57□□□□□ -2.16
C11orf54-213ENST00000533585 COX6B2Q6YFQ2 88 aa1.57□□□□□ -2.16
C11orf54-213ENST00000533585 DEFB124Q8NES8 71 aa1.57□□□□□ -2.16
C11orf54-213ENST00000533585 WDFY3Q8IZQ1 3526 aa1.57□□□□□ -2.16
C11orf54-213ENST00000533585 OTOGLQ3ZCN5 2332 aa1.57□□□□□ -2.16
C11orf54-213ENST00000533585 TRIOBPQ9H2D6 2365 aa1.57□□□□□ -2.16
C11orf54-213ENST00000533585 ADGRG4Q8IZF6 3080 aa1.57□□□□□ -2.16
C11orf54-213ENST00000533585 KRTAP10-4P60372 401 aaPredicted RBP1.56□□□□□ -2.16
C11orf54-213ENST00000533585 RHPN1-AS1Q9BWJ2 59 aa1.56□□□□□ -2.16
C11orf54-213ENST00000533585 TIMM8BQ9Y5J9 83 aaPredicted RBP1.56□□□□□ -2.16
C11orf54-213ENST00000533585 USP34Q70CQ2 3546 aa1.56□□□□□ -2.16
C11orf54-213ENST00000533585 ACACAQ13085 2346 aa1.56□□□□□ -2.16
C11orf54-213ENST00000533585 ZZEF1O43149 2961 aa1.56□□□□□ -2.16
C11orf54-213ENST00000533585 KALRNO60229 2985 aa1.56□□□□□ -2.16
C11orf54-213ENST00000533585 EYSQ5T1H1 3165 aa1.55□□□□□ -2.16
C11orf54-213ENST00000533585 M0QY20 66 aa1.55□□□□□ -2.16
C11orf54-213ENST00000533585 NDUFA1O15239 70 aa1.55□□□□□ -2.16
C11orf54-213ENST00000533585 ZNF292O60281 2723 aa1.55□□□□□ -2.16
C11orf54-213ENST00000533585 SPTA1P02549 2419 aa1.55□□□□□ -2.16
C11orf54-213ENST00000533585 CEP250Q9BV73 2442 aa1.55□□□□□ -2.16
C11orf54-213ENST00000533585 CFAP47Q6ZTR5 3102 aa1.54□□□□□ -2.16
C11orf54-213ENST00000533585 PTPRZ1P23471 2315 aaPredicted RBP1.54□□□□□ -2.16
C11orf54-213ENST00000533585 CNOT1A5YKK6 2376 aaKnown RBP1.54□□□□□ -2.16
C11orf54-213ENST00000533585 TACC2O95359 2948 aa1.53□□□□□ -2.16
C11orf54-213ENST00000533585 SPEGQ15772 3267 aa1.53□□□□□ -2.16
C11orf54-213ENST00000533585 H3BUX3 64 aa1.53□□□□□ -2.16
C11orf54-213ENST00000533585 LOC400499M0QZD8 3231 aa1.53□□□□□ -2.16
C11orf54-213ENST00000533585 APELAP0DMC3 54 aa1.53□□□□□ -2.16
C11orf54-213ENST00000533585 EP300Q09472 2414 aaPredicted RBP1.53□□□□□ -2.16
C11orf54-213ENST00000533585 ANKRD11Q6UB99 2663 aaPredicted RBP1.53□□□□□ -2.16
C11orf54-213ENST00000533585 PKDREJQ9NTG1 2253 aa1.53□□□□□ -2.16
C11orf54-213ENST00000533585 CELSR3Q9NYQ7 3312 aa1.53□□□□□ -2.16
C11orf54-213ENST00000533585 MYO15AQ9UKN7 3530 aa1.53□□□□□ -2.16
C11orf54-213ENST00000533585 BOD1L1Q8NFC6 3051 aa1.53□□□□□ -2.17
C11orf54-213ENST00000533585 MGAQ8IWI9 3026 aa1.53□□□□□ -2.17
C11orf54-213ENST00000533585 TLN1Q9Y490 2541 aaKnown RBP1.52□□□□□ -2.17
C11orf54-213ENST00000533585 SPTBN1Q01082 2364 aaKnown RBP1.52□□□□□ -2.17
C11orf54-213ENST00000533585 DMXL2Q8TDJ6 3036 aa1.52□□□□□ -2.17
C11orf54-213ENST00000533585 Q5VSD8 79 aa1.52□□□□□ -2.17
C11orf54-213ENST00000533585 RIF1Q5UIP0 2472 aaKnown RBP1.52□□□□□ -2.17
C11orf54-213ENST00000533585 CREBBPQ92793 2442 aa1.52□□□□□ -2.17
C11orf54-213ENST00000533585 PCNX1Q96RV3 2341 aa1.52□□□□□ -2.17
C11orf54-213ENST00000533585 DOPEY2Q9Y3R5 2298 aa1.52□□□□□ -2.17
C11orf54-213ENST00000533585 WDFY4Q6ZS81 3184 aa1.52□□□□□ -2.17
C11orf54-213ENST00000533585 MUC3AQ02505 3323 aa1.51□□□□□ -2.17
C11orf54-213ENST00000533585 COL6A3P12111 3177 aa1.51□□□□□ -2.17
C11orf54-213ENST00000533585 LYNX1G3V0Z9 82 aa1.51□□□□□ -2.17
C11orf54-213ENST00000533585 LINC00308Q8TCZ7 52 aa1.51□□□□□ -2.17
C11orf54-213ENST00000533585 RPL39LQ96EH5 51 aaKnown RBP1.51□□□□□ -2.17
C11orf54-213ENST00000533585 CDKN2A-AS1Q9UH64 79 aa1.51□□□□□ -2.17
C11orf54-213ENST00000533585 APLNQ9ULZ1 77 aa1.51□□□□□ -2.17
C11orf54-213ENST00000533585 ASH1LQ9NR48 2969 aaKnown RBP1.51□□□□□ -2.17
C11orf54-213ENST00000533585 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.51□□□□□ -2.172e-7■■■■□ 23.3
C11orf54-213ENST00000533585 OBSCNQ5VST9 7968 aa1.51□□□□□ -2.17
C11orf54-213ENST00000533585 ATMQ13315 3056 aa1.51□□□□□ -2.17
C11orf54-213ENST00000533585 TTC28Q96AY4 2481 aa1.5□□□□□ -2.17
C11orf54-213ENST00000533585 APC2O95996 2303 aa1.5□□□□□ -2.17
C11orf54-213ENST00000533585 PTPRQQ9UMZ3 2332 aa1.5□□□□□ -2.17
C11orf54-213ENST00000533585 H3BNG1 76 aa1.5□□□□□ -2.17
C11orf54-213ENST00000533585 SPRR1AP35321 89 aa1.5□□□□□ -2.17
C11orf54-213ENST00000533585 RPL39P62891 51 aaKnown RBP1.5□□□□□ -2.17
C11orf54-213ENST00000533585 LCE3AQ5TA76 89 aa1.5□□□□□ -2.17
C11orf54-213ENST00000533585 LRBAP50851 2863 aa1.49□□□□□ -2.17
C11orf54-213ENST00000533585 GVINP1Q7Z2Y8 2422 aa1.49□□□□□ -2.17
C11orf54-213ENST00000533585 DMXL1Q9Y485 3027 aa1.49□□□□□ -2.17
C11orf54-213ENST00000533585 DEFB131AP59861 70 aa1.49□□□□□ -2.17
C11orf54-213ENST00000533585 KRTAP4-3Q9BYR4 195 aa1.49□□□□□ -2.17
C11orf54-213ENST00000533585 SPTAN1Q13813 2472 aaKnown RBP1.49□□□□□ -2.17
C11orf54-213ENST00000533585 SPRR1BP22528 89 aa1.48□□□□□ -2.17
C11orf54-213ENST00000533585 LINC00158P58513 81 aa1.48□□□□□ -2.17
C11orf54-213ENST00000533585 DEFB105AQ8NG35 78 aa1.48□□□□□ -2.17
C11orf54-213ENST00000533585 CEP295Q9C0D2 2601 aa1.48□□□□□ -2.17
C11orf54-213ENST00000533585 DMDP11532 3685 aa1.47□□□□□ -2.17
C11orf54-213ENST00000533585 DOPEY1Q5JWR5 2465 aa1.47□□□□□ -2.17
C11orf54-213ENST00000533585 PRB3Q04118 309 aaPredicted RBP1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms