RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 A0A1B0GU69 56 aa2.76□□□□□ -1.97
ECHDC1-222ENST00000531967 MUC6Q6W4X9 2439 aa2.75□□□□□ -1.97
ECHDC1-222ENST00000531967 A0A096LNT2 108 aa2.75□□□□□ -1.97
ECHDC1-222ENST00000531967 Q96NJ1 140 aa2.75□□□□□ -1.97
ECHDC1-222ENST00000531967 MED13LQ71F56 2210 aa2.75□□□□□ -1.97
ECHDC1-222ENST00000531967 IGKV2-24A0A0C4DH68 120 aa2.75□□□□□ -1.97
ECHDC1-222ENST00000531967 DEFB104AQ8WTQ1 72 aa2.75□□□□□ -1.97
ECHDC1-222ENST00000531967 TRGV1A0A0A0MS02 117 aa2.74□□□□□ -1.97
ECHDC1-222ENST00000531967 RHPN1-AS1Q9BWJ2 59 aa2.74□□□□□ -1.97
ECHDC1-222ENST00000531967 CACNA1BQ00975 2339 aa2.74□□□□□ -1.97
ECHDC1-222ENST00000531967 CSMD1Q96PZ7 3565 aa2.74□□□□□ -1.97
ECHDC1-222ENST00000531967 LINC00575Q6W349 94 aa2.74□□□□□ -1.97
ECHDC1-222ENST00000531967 Q6ZQY7 126 aa2.74□□□□□ -1.97
ECHDC1-222ENST00000531967 SPTBN2O15020 2390 aa2.74□□□□□ -1.97
ECHDC1-222ENST00000531967 SPTBN1Q01082 2364 aaKnown RBP2.74□□□□□ -1.97
ECHDC1-222ENST00000531967 COX17Q14061 63 aa2.73□□□□□ -1.97
ECHDC1-222ENST00000531967 ASH1LQ9NR48 2969 aaKnown RBP2.73□□□□□ -1.97
ECHDC1-222ENST00000531967 H3BUX3 64 aa2.73□□□□□ -1.97
ECHDC1-222ENST00000531967 HIVEP3Q5T1R4 2406 aa2.73□□□□□ -1.97
ECHDC1-222ENST00000531967 DEFB1P60022 68 aa2.72□□□□□ -1.97
ECHDC1-222ENST00000531967 BRD3OSQ6XYD6 125 aa2.72□□□□□ -1.97
ECHDC1-222ENST00000531967 NBASA2RRP1 2371 aa2.72□□□□□ -1.97
ECHDC1-222ENST00000531967 Q8IZM0 81 aa2.72□□□□□ -1.97
ECHDC1-222ENST00000531967 CCL19Q99731 98 aa2.72□□□□□ -1.97
ECHDC1-222ENST00000531967 ABCA2Q9BZC7 2435 aa2.72□□□□□ -1.97
ECHDC1-222ENST00000531967 DOPEY2Q9Y3R5 2298 aa2.72□□□□□ -1.97
ECHDC1-222ENST00000531967 RELNP78509 3460 aa2.71□□□□□ -1.97
ECHDC1-222ENST00000531967 COL6A6A6NMZ7 2263 aa2.71□□□□□ -1.97
ECHDC1-222ENST00000531967 KRTAP10-8P60410 259 aa2.71□□□□□ -1.98
ECHDC1-222ENST00000531967 LCE1AQ5T7P2 110 aa2.71□□□□□ -1.98
ECHDC1-222ENST00000531967 Q6ZRN7 208 aaPredicted RBP2.71□□□□□ -1.98
ECHDC1-222ENST00000531967 SVEP1Q4LDE5 3571 aa2.71□□□□□ -1.98
ECHDC1-222ENST00000531967 KRTAP10-9P60411 292 aa2.71□□□□□ -1.98
ECHDC1-222ENST00000531967 KRTAP9-3Q9BYQ3 159 aa2.71□□□□□ -1.98
ECHDC1-222ENST00000531967 KRTAP2-2Q9BYT5 123 aa2.71□□□□□ -1.98
ECHDC1-222ENST00000531967 IGF2RP11717 2491 aa2.71□□□□□ -1.98
ECHDC1-222ENST00000531967 DEFB131BA0A096LNP1 70 aa2.7□□□□□ -1.98
ECHDC1-222ENST00000531967 SPINK13Q1W4C9 94 aa2.7□□□□□ -1.98
ECHDC1-222ENST00000531967 SORL1Q92673 2214 aa2.69□□□□□ -1.98
ECHDC1-222ENST00000531967 SPTAN1Q13813 2472 aaKnown RBP2.69□□□□□ -1.98
ECHDC1-222ENST00000531967 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.69□□□□□ -1.981e-8■■■■■ 31.1
ECHDC1-222ENST00000531967 VPS13CQ709C8 3753 aa2.69□□□□□ -1.98
ECHDC1-222ENST00000531967 AKAP6Q13023 2319 aa2.68□□□□□ -1.98
ECHDC1-222ENST00000531967 ACYP2P14621 99 aa2.67□□□□□ -1.98
ECHDC1-222ENST00000531967 IGFL1Q6UW32 110 aa2.67□□□□□ -1.98
ECHDC1-222ENST00000531967 ITPR1Q14643 2758 aa2.67□□□□□ -1.98
ECHDC1-222ENST00000531967 CELSR1Q9NYQ6 3014 aa2.67□□□□□ -1.98
ECHDC1-222ENST00000531967 TOMM7Q9P0U1 55 aa2.67□□□□□ -1.98
ECHDC1-222ENST00000531967 LCE1FQ5T754 118 aa2.66□□□□□ -1.98
ECHDC1-222ENST00000531967 DEFB131AP59861 70 aa2.66□□□□□ -1.98
ECHDC1-222ENST00000531967 DOPEY1Q5JWR5 2465 aa2.65□□□□□ -1.99
ECHDC1-222ENST00000531967 C10orf99Q6UWK7 81 aa2.65□□□□□ -1.99
ECHDC1-222ENST00000531967 CRYBG3Q68DQ2 2970 aa2.65□□□□□ -1.99
ECHDC1-222ENST00000531967 CELSR2Q9HCU4 2923 aa2.65□□□□□ -1.99
ECHDC1-222ENST00000531967 SPTBN4Q9H254 2564 aa2.65□□□□□ -1.99
ECHDC1-222ENST00000531967 NCOR2Q9Y618 2525 aa2.65□□□□□ -1.99
ECHDC1-222ENST00000531967 CSPG4Q6UVK1 2322 aa2.64□□□□□ -1.99
ECHDC1-222ENST00000531967 IGLV5-48A0A075B6I7 105 aa2.64□□□□□ -1.99
ECHDC1-222ENST00000531967 GVQW2A0A096LPI5 108 aaPredicted RBP2.64□□□□□ -1.99
ECHDC1-222ENST00000531967 K7EQZ3 153 aa2.64□□□□□ -1.99
ECHDC1-222ENST00000531967 HTN1P15515 57 aa2.64□□□□□ -1.99
ECHDC1-222ENST00000531967 SSBP3-AS1Q7Z2R9 100 aa2.64□□□□□ -1.99
ECHDC1-222ENST00000531967 CHD8Q9HCK8 2581 aa2.64□□□□□ -1.99
ECHDC1-222ENST00000531967 COL12A1Q99715 3063 aa2.64□□□□□ -1.99
ECHDC1-222ENST00000531967 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.64□□□□□ -1.99
ECHDC1-222ENST00000531967 MAP1AP78559 2803 aaPredicted RBP2.63□□□□□ -1.99
ECHDC1-222ENST00000531967 CREBBPQ92793 2442 aa2.63□□□□□ -1.99
ECHDC1-222ENST00000531967 ANKRD17O75179 2603 aaKnown RBP2.63□□□□□ -1.99
ECHDC1-222ENST00000531967 KRTAP10-11P60412 298 aa2.63□□□□□ -1.99
ECHDC1-222ENST00000531967 SPG11Q96JI7 2443 aa2.63□□□□□ -1.99
ECHDC1-222ENST00000531967 MUC5BQ9HC84 5762 aaPredicted RBP2.62□□□□□ -1.99
ECHDC1-222ENST00000531967 CFAP46Q8IYW2 2715 aa2.62□□□□□ -1.99
ECHDC1-222ENST00000531967 KMT2BQ9UMN6 2715 aaPredicted RBP2.62□□□□□ -1.99
ECHDC1-222ENST00000531967 DEFB136Q30KP8 78 aa2.62□□□□□ -1.99
ECHDC1-222ENST00000531967 FLNCQ14315 2725 aa2.62□□□□□ -1.99
ECHDC1-222ENST00000531967 PKD1L2Q7Z442 2459 aa2.62□□□□□ -1.99
ECHDC1-222ENST00000531967 MXRA5Q9NR99 2828 aa2.62□□□□□ -1.99
ECHDC1-222ENST00000531967 KRTAP5-9P26371 169 aa2.61□□□□□ -1.99
ECHDC1-222ENST00000531967 USP9XQ93008 2570 aaPredicted RBP2.61□□□□□ -1.99
ECHDC1-222ENST00000531967 ANGP03950 147 aaKnown RBP2.61□□□□□ -1.99
ECHDC1-222ENST00000531967 WFDC13Q8IUB5 93 aa2.6□□□□□ -1.99
ECHDC1-222ENST00000531967 USP9YO00507 2555 aaPredicted RBP2.6□□□□□ -1.99
ECHDC1-222ENST00000531967 MYO18BQ8IUG5 2567 aa2.6□□□□□ -1.99
ECHDC1-222ENST00000531967 ZANQ9Y493 2812 aa2.6□□□□□ -1.99
ECHDC1-222ENST00000531967 PCOTHQ58A44 107 aa2.6□□□□□ -1.99
ECHDC1-222ENST00000531967 UTP20O75691 2785 aaKnown RBP2.6□□□□□ -1.99
ECHDC1-222ENST00000531967 MYO9AB2RTY4 2548 aa2.6□□□□□ -1.99
ECHDC1-222ENST00000531967 CACNA1AO00555 2505 aa2.6□□□□□ -1.99
ECHDC1-222ENST00000531967 IGSF10Q6WRI0 2623 aa2.59□□□□□ -1.99
ECHDC1-222ENST00000531967 AKAP9Q99996 3911 aa2.59□□□□□ -1.99
ECHDC1-222ENST00000531967 WFDC10BQ8IUB3 73 aa2.59□□□□□ -1.99
ECHDC1-222ENST00000531967 ACACBO00763 2458 aa2.59□□□□□ -1.99
ECHDC1-222ENST00000531967 NOP10Q9NPE3 64 aaKnown RBP2.58□□□□□ -2
ECHDC1-222ENST00000531967 TEX15Q9BXT5 2789 aa2.58□□□□□ -2
ECHDC1-222ENST00000531967 TP53AIP1Q9HCN2 124 aa2.58□□□□□ -2
ECHDC1-222ENST00000531967 CHD6Q8TD26 2715 aa2.58□□□□□ -2
ECHDC1-222ENST00000531967 UBR5O95071 2799 aaPredicted RBP2.58□□□□□ -2
ECHDC1-222ENST00000531967 LY6G6CO95867 125 aa2.57□□□□□ -2
ECHDC1-222ENST00000531967 PIEZO1Q92508 2521 aa2.57□□□□□ -2
ECHDC1-222ENST00000531967 KRTAP1-1Q07627 177 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms