RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 NAA38Q9BRA0 125 aaKnown RBP12.32□□□□□ -0.44
CAPN1-220ENST00000530567 SNCGO76070 127 aa12.3□□□□□ -0.44
CAPN1-220ENST00000530567 PPDPFLQ8WWR9 84 aa12.3□□□□□ -0.44
CAPN1-220ENST00000530567 SPAG11AQ6PDA7 123 aa12.28□□□□□ -0.44
CAPN1-220ENST00000530567 HMCN2Q8NDA2 5059 aa12.28□□□□□ -0.44
CAPN1-220ENST00000530567 SCGB1C2P0DMR2 95 aa12.28□□□□□ -0.44
CAPN1-220ENST00000530567 OCIAD2Q56VL3 154 aa12.28□□□□□ -0.44
CAPN1-220ENST00000530567 SNHG12Q9BXW3 62 aa12.28□□□□□ -0.44
CAPN1-220ENST00000530567 LST1O00453 97 aa12.26□□□□□ -0.45
CAPN1-220ENST00000530567 C4orf48Q5BLP8 95 aa12.24□□□□□ -0.45
CAPN1-220ENST00000530567 TAX1BP3O14907 124 aa12.23□□□□□ -0.45
CAPN1-220ENST00000530567 IGLV8-61A0A075B6I0 122 aa12.22□□□□□ -0.45
CAPN1-220ENST00000530567 DNAL4O96015 105 aa12.22□□□□□ -0.45
CAPN1-220ENST00000530567 SPINK1P00995 79 aa12.22□□□□□ -0.45
CAPN1-220ENST00000530567 TRACP01848 142 aa12.22□□□□□ -0.45
CAPN1-220ENST00000530567 A0A0G2JQZ4 141 aa12.21□□□□□ -0.45
CAPN1-220ENST00000530567 F8WEM9 126 aa12.21□□□□□ -0.45
CAPN1-220ENST00000530567 H3BUT2 72 aa12.2□□□□□ -0.46
CAPN1-220ENST00000530567 PCP4L1A6NKN8 68 aa12.2□□□□□ -0.46
CAPN1-220ENST00000530567 TCL1BO95988 128 aa12.2□□□□□ -0.46
CAPN1-220ENST00000530567 ORMDL1Q9P0S3 153 aa12.2□□□□□ -0.46
CAPN1-220ENST00000530567 C9orf118A6NHY6 69 aa12.19□□□□□ -0.46
CAPN1-220ENST00000530567 NDUFV3P56181 108 aaKnown RBP12.18□□□□□ -0.46
CAPN1-220ENST00000530567 RPS29P62273 56 aaKnown RBP12.18□□□□□ -0.46
CAPN1-220ENST00000530567 GHRHP01286 108 aa12.17□□□□□ -0.46
CAPN1-220ENST00000530567 FABP2P12104 132 aa12.17□□□□□ -0.46
CAPN1-220ENST00000530567 HRCT1Q6UXD1 115 aa12.16□□□□□ -0.46
CAPN1-220ENST00000530567 CD164Q04900 197 aa12.15□□□□□ -0.46
CAPN1-220ENST00000530567 RETNLBQ9BQ08 111 aa12.15□□□□□ -0.46
CAPN1-220ENST00000530567 ATXN8Q156A1 80 aa12.14□□□□□ -0.47
CAPN1-220ENST00000530567 Q6JHZ5 121 aa12.14□□□□□ -0.47
CAPN1-220ENST00000530567 IGFL1Q6UW32 110 aa12.14□□□□□ -0.47
CAPN1-220ENST00000530567 H3BQ85 93 aa12.13□□□□□ -0.47
CAPN1-220ENST00000530567 LYRM7Q5U5X0 104 aa12.13□□□□□ -0.47
CAPN1-220ENST00000530567 A0A1W2PPM0 123 aa12.11□□□□□ -0.47
CAPN1-220ENST00000530567 TMEM256-PLSCR3K7ERE1 68 aa12.11□□□□□ -0.47
CAPN1-220ENST00000530567 COL5A1-AS1Q5SY13 56 aa12.11□□□□□ -0.47
CAPN1-220ENST00000530567 TRBV20-1A0A075B6N2 111 aa12.1□□□□□ -0.47
CAPN1-220ENST00000530567 PRR4Q16378 134 aa12.1□□□□□ -0.47
CAPN1-220ENST00000530567 H3BMG7 143 aa12.09□□□□□ -0.47
CAPN1-220ENST00000530567 UBE2V1Q13404 147 aa12.08□□□□□ -0.48
CAPN1-220ENST00000530567 BAALC-AS2P0C853 105 aa12.06□□□□□ -0.48
CAPN1-220ENST00000530567 Q5XG85 94 aa12.04□□□□□ -0.48
CAPN1-220ENST00000530567 LIMD2Q9BT23 127 aa12.04□□□□□ -0.48
CAPN1-220ENST00000530567 A0A1B0GV72 72 aa12.03□□□□□ -0.48
CAPN1-220ENST00000530567 TRBV7-7A0A0K0K1E9 115 aa12.02□□□□□ -0.49
CAPN1-220ENST00000530567 ANKRD29Q8N6D5 301 aa12.02□□□□□ -0.49
CAPN1-220ENST00000530567 LRP2P98164 4655 aa12.01□□□□□ -0.49
CAPN1-220ENST00000530567 LPAP08519 4548 aa12.01□□□□□ -0.49
CAPN1-220ENST00000530567 C9JAW5 83 aa12□□□□□ -0.49
CAPN1-220ENST00000530567 Q6Q795 121 aa12□□□□□ -0.49
CAPN1-220ENST00000530567 FP248Q71RG6 208 aaPredicted RBP12□□□□□ -0.49
CAPN1-220ENST00000530567 IGLV7-46A0A075B6I9 117 aa11.98□□□□□ -0.49
CAPN1-220ENST00000530567 SPCS1Q9Y6A9 102 aa11.98□□□□□ -0.49
CAPN1-220ENST00000530567 A0A1W2PNM2 257 aa11.96□□□□□ -0.49
CAPN1-220ENST00000530567 TEN1Q86WV5 123 aa11.95□□□□□ -0.5
CAPN1-220ENST00000530567 TRBV7-4A0A0J9YYF1 115 aa11.94□□□□□ -0.5
CAPN1-220ENST00000530567 MTURNQ8N3F0 131 aa11.94□□□□□ -0.5
CAPN1-220ENST00000530567 RBM3P98179 157 aaKnown RBP11.93□□□□□ -0.5
CAPN1-220ENST00000530567 C1orf195Q5TG92 126 aa11.93□□□□□ -0.5
CAPN1-220ENST00000530567 TPRXLQ17RH7 258 aa11.91□□□□□ -0.5
CAPN1-220ENST00000530567 ASB16-AS1Q495Z4 193 aa11.91□□□□□ -0.5
CAPN1-220ENST00000530567 H3BT86 120 aa11.9□□□□□ -0.5
CAPN1-220ENST00000530567 K7EP34 96 aa11.89□□□□□ -0.51
CAPN1-220ENST00000530567 A0A087WSZ3 146 aa11.87□□□□□ -0.51
CAPN1-220ENST00000530567 OBSCN-AS1Q96MR7 158 aa11.87□□□□□ -0.51
CAPN1-220ENST00000530567 DSCR8Q96T75 97 aa11.87□□□□□ -0.51
CAPN1-220ENST00000530567 JMJD7-PLA2G4BH0Y9G9 81 aa11.86□□□□□ -0.51
CAPN1-220ENST00000530567 CCKP06307 115 aa11.86□□□□□ -0.51
CAPN1-220ENST00000530567 KRTAP13-3Q3SY46 172 aa11.86□□□□□ -0.51
CAPN1-220ENST00000530567 UBR4Q5T4S7 5183 aa11.85□□□□□ -0.51
CAPN1-220ENST00000530567 SMCPP49901 116 aaPredicted RBP11.84□□□□□ -0.51
CAPN1-220ENST00000530567 SS18L2Q9UHA2 77 aa11.84□□□□□ -0.51
CAPN1-220ENST00000530567 PRO0461Q9UI25 63 aa11.83□□□□□ -0.52
CAPN1-220ENST00000530567 LOC110117498A0A087WWA1 95 aa11.82□□□□□ -0.52
CAPN1-220ENST00000530567 Q6ZQT0 140 aa11.81□□□□□ -0.52
CAPN1-220ENST00000530567 C14orf132Q9NPU4 83 aa11.81□□□□□ -0.52
CAPN1-220ENST00000530567 VPS25Q9BRG1 176 aa11.79□□□□□ -0.52
CAPN1-220ENST00000530567 Q96NJ1 140 aa11.77□□□□□ -0.52
CAPN1-220ENST00000530567 GTF2H5Q6ZYL4 71 aa11.77□□□□□ -0.53
CAPN1-220ENST00000530567 CDIP1Q9H305 208 aa11.77□□□□□ -0.53
CAPN1-220ENST00000530567 PDE6GP18545 87 aa11.75□□□□□ -0.53
CAPN1-220ENST00000530567 C9orf92A6NGG3 77 aa11.69□□□□□ -0.54
CAPN1-220ENST00000530567 LINC00472Q9H8W2 130 aa11.69□□□□□ -0.54
CAPN1-220ENST00000530567 XP32Q5T750 250 aa11.68□□□□□ -0.54
CAPN1-220ENST00000530567 A0A1B0GW54 56 aa11.67□□□□□ -0.54
CAPN1-220ENST00000530567 C21orf62-AS1Q17RA5 79 aa11.66□□□□□ -0.54
CAPN1-220ENST00000530567 F8W1H4 67 aa11.64□□□□□ -0.55
CAPN1-220ENST00000530567 DEFB116Q30KQ4 102 aa11.62□□□□□ -0.55
CAPN1-220ENST00000530567 MUC17Q685J3 4493 aa11.62□□□□□ -0.55
CAPN1-220ENST00000530567 IGKV4-1P06312 121 aa11.61□□□□□ -0.55
CAPN1-220ENST00000530567 SIGMAR1Q99720 223 aa11.61□□□□□ -0.55
CAPN1-220ENST00000530567 RNF213Q63HN8 5207 aa11.59□□□□□ -0.55
CAPN1-220ENST00000530567 A0A1B0GV90 55 aa11.58□□□□□ -0.56
CAPN1-220ENST00000530567 ETDBQ3ZM63 59 aa11.56□□□□□ -0.56
CAPN1-220ENST00000530567 J3KT08 172 aa11.51□□□□□ -0.57
CAPN1-220ENST00000530567 NREPQ16612 68 aa11.5□□□□□ -0.57
CAPN1-220ENST00000530567 DSCR10P59022 87 aa11.49□□□□□ -0.57
CAPN1-220ENST00000530567 SEC61BP60468 96 aaKnown RBP11.48□□□□□ -0.57
CAPN1-220ENST00000530567 RPL37P61927 97 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms