RNA–Protein interactions for RNA: ENST00000526772.5

CTNND1-214, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,966 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-214ENST00000526772 H0YAA0 97 aa3.7□□□□□ -1.82
CTNND1-214ENST00000526772 RPS29P62273 56 aaKnown RBP3.69□□□□□ -1.82
CTNND1-214ENST00000526772 KRTAP13-1Q8IUC0 172 aa3.68□□□□□ -1.82
CTNND1-214ENST00000526772 CCDC168Q8NDH2 2452 aa3.68□□□□□ -1.82
CTNND1-214ENST00000526772 KRTAP7-1Q8IUC3 87 aa3.67□□□□□ -1.82
CTNND1-214ENST00000526772 IGF2RP11717 2491 aa3.67□□□□□ -1.82
CTNND1-214ENST00000526772 ANKRD17O75179 2603 aaKnown RBP3.67□□□□□ -1.82
CTNND1-214ENST00000526772 DOPEY1Q5JWR5 2465 aa3.67□□□□□ -1.82
CTNND1-214ENST00000526772 NCOR2Q9Y618 2525 aa3.66□□□□□ -1.82
CTNND1-214ENST00000526772 KMT2BQ9UMN6 2715 aaPredicted RBP3.66□□□□□ -1.82
CTNND1-214ENST00000526772 LRRK2Q5S007 2527 aa3.66□□□□□ -1.82
CTNND1-214ENST00000526772 HTTP42858 3142 aa3.65□□□□□ -1.82
CTNND1-214ENST00000526772 ABCA12Q86UK0 2595 aa3.65□□□□□ -1.82
CTNND1-214ENST00000526772 PKD1L2Q7Z442 2459 aa3.65□□□□□ -1.83
CTNND1-214ENST00000526772 COL6A3P12111 3177 aa3.65□□□□□ -1.83
CTNND1-214ENST00000526772 USP9YO00507 2555 aaPredicted RBP3.64□□□□□ -1.83
CTNND1-214ENST00000526772 SZT2Q5T011 3432 aa3.64□□□□□ -1.83
CTNND1-214ENST00000526772 CHD8Q9HCK8 2581 aa3.62□□□□□ -1.83
CTNND1-214ENST00000526772 INE1O15225 51 aa3.62□□□□□ -1.83
CTNND1-214ENST00000526772 KRTAP1-5Q9BYS1 174 aa3.61□□□□□ -1.83
CTNND1-214ENST00000526772 JMJD1CQ15652 2540 aa3.61□□□□□ -1.83
CTNND1-214ENST00000526772 TNP1P09430 55 aa3.61□□□□□ -1.83
CTNND1-214ENST00000526772 PRO2289Q9P1D8 64 aa3.6□□□□□ -1.83
CTNND1-214ENST00000526772 BDP1A6H8Y1 2624 aa3.59□□□□□ -1.83
CTNND1-214ENST00000526772 MYO18BQ8IUG5 2567 aa3.58□□□□□ -1.84
CTNND1-214ENST00000526772 UNC80Q8N2C7 3258 aa3.58□□□□□ -1.84
CTNND1-214ENST00000526772 ACANP16112 2415 aa3.57□□□□□ -1.84
CTNND1-214ENST00000526772 ANKRD11Q6UB99 2663 aaPredicted RBP3.57□□□□□ -1.84
CTNND1-214ENST00000526772 KRTAP15-1Q3LI76 137 aa3.57□□□□□ -1.84
CTNND1-214ENST00000526772 PRUNE2Q8WUY3 3088 aa3.56□□□□□ -1.84
CTNND1-214ENST00000526772 POLQO75417 2590 aa3.56□□□□□ -1.84
CTNND1-214ENST00000526772 KRTAP23-1A1A580 65 aa3.55□□□□□ -1.84
CTNND1-214ENST00000526772 SETD2Q9BYW2 2564 aaPredicted RBP3.54□□□□□ -1.84
CTNND1-214ENST00000526772 MKI67P46013 3256 aaKnown RBP3.53□□□□□ -1.84
CTNND1-214ENST00000526772 KRTAP13-3Q3SY46 172 aa3.53□□□□□ -1.84
CTNND1-214ENST00000526772 KRTAP10-8P60410 259 aa3.52□□□□□ -1.85
CTNND1-214ENST00000526772 MTORP42345 2549 aa3.52□□□□□ -1.85
CTNND1-214ENST00000526772 DMBT1Q9UGM3 2413 aaPredicted RBP3.52□□□□□ -1.85
CTNND1-214ENST00000526772 ZFYVE26Q68DK2 2539 aa3.52□□□□□ -1.85
CTNND1-214ENST00000526772 TPRXLQ17RH7 258 aa3.52□□□□□ -1.85
CTNND1-214ENST00000526772 NOTCH2Q04721 2471 aa3.52□□□□□ -1.85
CTNND1-214ENST00000526772 CEP295Q9C0D2 2601 aa3.51□□□□□ -1.85
CTNND1-214ENST00000526772 MUC3AQ02505 3323 aa3.5□□□□□ -1.85
CTNND1-214ENST00000526772 Q6ZRN7 208 aaPredicted RBP3.5□□□□□ -1.85
CTNND1-214ENST00000526772 CENPFP49454 3210 aa3.5□□□□□ -1.85
CTNND1-214ENST00000526772 BRCA2P51587 3418 aa3.49□□□□□ -1.85
CTNND1-214ENST00000526772 PIEZO1Q92508 2521 aa3.49□□□□□ -1.85
CTNND1-214ENST00000526772 SMR3BP02814 79 aaPredicted RBP3.48□□□□□ -1.85
CTNND1-214ENST00000526772 KRTAP13-2Q52LG2 175 aa3.48□□□□□ -1.85
CTNND1-214ENST00000526772 RANBP2P49792 3224 aaKnown RBP3.48□□□□□ -1.85
CTNND1-214ENST00000526772 LAMA2P24043 3122 aaKnown RBP3.45□□□□□ -1.86
CTNND1-214ENST00000526772 TRANK1O15050 2925 aa3.45□□□□□ -1.86
CTNND1-214ENST00000526772 A0A0C4DFX4 3053 aa3.44□□□□□ -1.86
CTNND1-214ENST00000526772 EYSQ5T1H1 3165 aa3.44□□□□□ -1.86
CTNND1-214ENST00000526772 KRTAP10-1P60331 282 aa3.43□□□□□ -1.86
CTNND1-214ENST00000526772 REV3LO60673 3130 aa3.43□□□□□ -1.86
CTNND1-214ENST00000526772 DNAH12Q6ZR08 3092 aa3.42□□□□□ -1.86
CTNND1-214ENST00000526772 ZFHX4Q86UP3 3567 aa3.42□□□□□ -1.86
CTNND1-214ENST00000526772 CHD9Q3L8U1 2897 aa3.42□□□□□ -1.86
CTNND1-214ENST00000526772 EPG5Q9HCE0 2579 aa3.41□□□□□ -1.86
CTNND1-214ENST00000526772 LAMA3Q16787 3333 aa3.41□□□□□ -1.86
CTNND1-214ENST00000526772 PRRC2CQ9Y520 2896 aaKnown RBP3.4□□□□□ -1.87
CTNND1-214ENST00000526772 KRTAP10-2P60368 255 aa3.39□□□□□ -1.87
CTNND1-214ENST00000526772 BAHCC1Q9P281 2608 aa3.39□□□□□ -1.87
CTNND1-214ENST00000526772 VCANP13611 3396 aa3.39□□□□□ -1.87
CTNND1-214ENST00000526772 USP34Q70CQ2 3546 aa3.37□□□□□ -1.87
CTNND1-214ENST00000526772 SPTBN4Q9H254 2564 aa3.37□□□□□ -1.87
CTNND1-214ENST00000526772 FASNP49327 2511 aaKnown RBP3.36□□□□□ -1.87
CTNND1-214ENST00000526772 DCHS1Q96JQ0 3298 aa3.35□□□□□ -1.87
CTNND1-214ENST00000526772 CHD7Q9P2D1 2997 aa3.35□□□□□ -1.87
CTNND1-214ENST00000526772 CENPEQ02224 2701 aa3.35□□□□□ -1.87
CTNND1-214ENST00000526772 KRTAP13-4Q3LI77 160 aa3.34□□□□□ -1.87
CTNND1-214ENST00000526772 FLNAP21333 2647 aaKnown RBP3.34□□□□□ -1.87
CTNND1-214ENST00000526772 Q5VSD8 79 aa3.34□□□□□ -1.87
CTNND1-214ENST00000526772 KRTAP12-2P59991 146 aa3.33□□□□□ -1.88
CTNND1-214ENST00000526772 KRTAP1-4P0C5Y4 121 aa3.32□□□□□ -1.88
CTNND1-214ENST00000526772 GCN1Q92616 2671 aaKnown RBP3.32□□□□□ -1.88
CTNND1-214ENST00000526772 UNC79Q9P2D8 2635 aa3.32□□□□□ -1.88
CTNND1-214ENST00000526772 M0R2T5 61 aa3.32□□□□□ -1.88
CTNND1-214ENST00000526772 CDH23Q9H251 3354 aa3.32□□□□□ -1.88
CTNND1-214ENST00000526772 ZNF292O60281 2723 aa3.31□□□□□ -1.88
CTNND1-214ENST00000526772 ASH1LQ9NR48 2969 aaKnown RBP3.31□□□□□ -1.88
CTNND1-214ENST00000526772 XP32Q5T750 250 aa3.31□□□□□ -1.88
CTNND1-214ENST00000526772 USP24Q9UPU5 2620 aa3.3□□□□□ -1.88
CTNND1-214ENST00000526772 KRTAP12-1P59990 96 aa3.3□□□□□ -1.88
CTNND1-214ENST00000526772 CHD6Q8TD26 2715 aa3.3□□□□□ -1.88
CTNND1-214ENST00000526772 KRTAP21-3Q3LHN1 58 aa3.29□□□□□ -1.88
CTNND1-214ENST00000526772 XIRP2A4UGR9 3374 aa3.28□□□□□ -1.88
CTNND1-214ENST00000526772 ITPR3Q14573 2671 aa3.27□□□□□ -1.89
CTNND1-214ENST00000526772 CFAP54Q96N23 3096 aa3.25□□□□□ -1.89
CTNND1-214ENST00000526772 ATRQ13535 2644 aa3.24□□□□□ -1.89
CTNND1-214ENST00000526772 DMXL1Q9Y485 3027 aa3.24□□□□□ -1.89
CTNND1-214ENST00000526772 ITPR1Q14643 2758 aa3.23□□□□□ -1.89
CTNND1-214ENST00000526772 WDFY4Q6ZS81 3184 aa3.23□□□□□ -1.89
CTNND1-214ENST00000526772 DMDP11532 3685 aa3.23□□□□□ -1.89
CTNND1-214ENST00000526772 NBEAL1Q6ZS30 2694 aa3.22□□□□□ -1.89
CTNND1-214ENST00000526772 DNAH14Q0VDD8 3507 aa3.22□□□□□ -1.89
CTNND1-214ENST00000526772 C5orf42Q9H799 3197 aa3.22□□□□□ -1.89
CTNND1-214ENST00000526772 MAP1AP78559 2803 aaPredicted RBP3.21□□□□□ -1.9
CTNND1-214ENST00000526772 MYO15AQ9UKN7 3530 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms