RNA–Protein interactions for RNA: ENST00000514493.5

SSBP2-218, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SSBP2, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-218ENST00000514493 SRRM2Q9UQ35 2752 aaKnown RBP12□□□□□ -0.49
SSBP2-218ENST00000514493 LOC110117498A0A087WWA1 95 aa12□□□□□ -0.49
SSBP2-218ENST00000514493 DSCR8Q96T75 97 aa12□□□□□ -0.49
SSBP2-218ENST00000514493 ACYP1P07311 99 aa11.99□□□□□ -0.49
SSBP2-218ENST00000514493 C3orf22Q8N5N4 141 aa11.99□□□□□ -0.49
SSBP2-218ENST00000514493 KRTAP17-1Q9BYP8 105 aa11.99□□□□□ -0.49
SSBP2-218ENST00000514493 CCKP06307 115 aa11.98□□□□□ -0.49
SSBP2-218ENST00000514493 TRBV7-4A0A0J9YYF1 115 aa11.97□□□□□ -0.49
SSBP2-218ENST00000514493 PDE6GP18545 87 aa11.97□□□□□ -0.49
SSBP2-218ENST00000514493 Q6ZQT0 140 aa11.97□□□□□ -0.49
SSBP2-218ENST00000514493 CDK2AP2O75956 126 aa11.97□□□□□ -0.49
SSBP2-218ENST00000514493 CDIP1Q9H305 208 aa11.97□□□□□ -0.49
SSBP2-218ENST00000514493 HERC2O95714 4834 aa11.96□□□□□ -0.49
SSBP2-218ENST00000514493 SMR3BP02814 79 aaPredicted RBP11.96□□□□□ -0.49
SSBP2-218ENST00000514493 RPL37AP61513 92 aaKnown RBP11.96□□□□□ -0.49
SSBP2-218ENST00000514493 SPRR1BP22528 89 aa11.95□□□□□ -0.5
SSBP2-218ENST00000514493 SMIM29Q86T20 159 aa11.95□□□□□ -0.5
SSBP2-218ENST00000514493 C21orf62-AS1Q17RA5 79 aa11.92□□□□□ -0.5
SSBP2-218ENST00000514493 ZNF706Q9Y5V0 76 aaPredicted RBP11.92□□□□□ -0.5
SSBP2-218ENST00000514493 FAT1Q14517 4588 aa11.92□□□□□ -0.5
SSBP2-218ENST00000514493 F8WEM9 126 aa11.92□□□□□ -0.5
SSBP2-218ENST00000514493 SPRR4Q96PI1 79 aa11.92□□□□□ -0.5
SSBP2-218ENST00000514493 LINC00483Q53H64 154 aa11.87□□□□□ -0.51
SSBP2-218ENST00000514493 KRTAP10-4P60372 401 aaPredicted RBP11.87□□□□□ -0.51
SSBP2-218ENST00000514493 IGLV8-61A0A075B6I0 122 aa11.86□□□□□ -0.51
SSBP2-218ENST00000514493 LINC00846Q9NV44 126 aa11.86□□□□□ -0.51
SSBP2-218ENST00000514493 SPINK6Q6UWN8 80 aa11.82□□□□□ -0.52
SSBP2-218ENST00000514493 KRTAP4-5Q9BYR2 181 aa11.81□□□□□ -0.52
SSBP2-218ENST00000514493 FAM229AH3BQW9 127 aa11.8□□□□□ -0.52
SSBP2-218ENST00000514493 SIGMAR1Q99720 223 aa11.8□□□□□ -0.52
SSBP2-218ENST00000514493 PLA2G1BP04054 148 aaKnown RBP11.79□□□□□ -0.52
SSBP2-218ENST00000514493 IGFL1Q6UW32 110 aa11.79□□□□□ -0.52
SSBP2-218ENST00000514493 Q8NBF4 154 aa11.79□□□□□ -0.52
SSBP2-218ENST00000514493 A0A1W2PNM2 257 aa11.78□□□□□ -0.52
SSBP2-218ENST00000514493 MT-ATP8P03928 68 aa11.78□□□□□ -0.52
SSBP2-218ENST00000514493 Q6JHZ5 121 aa11.78□□□□□ -0.52
SSBP2-218ENST00000514493 LINC00643Q86TS7 51 aa11.78□□□□□ -0.52
SSBP2-218ENST00000514493 ANAPC11Q9NYG5 84 aa11.77□□□□□ -0.52
SSBP2-218ENST00000514493 Q5VSD8 79 aa11.77□□□□□ -0.53
SSBP2-218ENST00000514493 UBL5Q9BZL1 73 aa11.77□□□□□ -0.53
SSBP2-218ENST00000514493 A0A1B0GW54 56 aa11.76□□□□□ -0.53
SSBP2-218ENST00000514493 PKHD1L1Q86WI1 4243 aa11.76□□□□□ -0.53
SSBP2-218ENST00000514493 Q8N1X5 172 aa11.75□□□□□ -0.53
SSBP2-218ENST00000514493 KRTAP1-4P0C5Y4 121 aa11.74□□□□□ -0.53
SSBP2-218ENST00000514493 IGLV9-49A0A0B4J1Y8 123 aa11.74□□□□□ -0.53
SSBP2-218ENST00000514493 ABCA13Q86UQ4 5058 aa11.73□□□□□ -0.53
SSBP2-218ENST00000514493 A0A0G2JQZ4 141 aa11.72□□□□□ -0.53
SSBP2-218ENST00000514493 FAM229BQ4G0N7 80 aa11.72□□□□□ -0.53
SSBP2-218ENST00000514493 C9orf153Q5TBE3 101 aa11.72□□□□□ -0.53
SSBP2-218ENST00000514493 CRYGAP11844 174 aa11.71□□□□□ -0.54
SSBP2-218ENST00000514493 Q6ZVQ6 151 aa11.71□□□□□ -0.54
SSBP2-218ENST00000514493 MOBPQ13875 183 aa11.69□□□□□ -0.54
SSBP2-218ENST00000514493 A0A087X002 238 aa11.67□□□□□ -0.54
SSBP2-218ENST00000514493 Q6Q795 121 aa11.67□□□□□ -0.54
SSBP2-218ENST00000514493 ATP5EP2Q5VTU8 51 aa11.67□□□□□ -0.54
SSBP2-218ENST00000514493 TRBV7-7A0A0K0K1E9 115 aa11.65□□□□□ -0.54
SSBP2-218ENST00000514493 NREPQ16612 68 aa11.64□□□□□ -0.55
SSBP2-218ENST00000514493 KRTAP13-2Q52LG2 175 aa11.64□□□□□ -0.55
SSBP2-218ENST00000514493 PCLOQ9Y6V0 5065 aa11.63□□□□□ -0.55
SSBP2-218ENST00000514493 IGKV3D-7A0A0C4DH55 119 aa11.62□□□□□ -0.55
SSBP2-218ENST00000514493 IMUPQ9GZP8 106 aa11.62□□□□□ -0.55
SSBP2-218ENST00000514493 A0A087WSZ3 146 aa11.61□□□□□ -0.55
SSBP2-218ENST00000514493 SSBP3-AS1Q7Z2R9 100 aa11.59□□□□□ -0.55
SSBP2-218ENST00000514493 CXCL6P80162 114 aa11.58□□□□□ -0.56
SSBP2-218ENST00000514493 SCGB1A1P11684 91 aa11.56□□□□□ -0.56
SSBP2-218ENST00000514493 PRR26Q8N8Z3 221 aa11.55□□□□□ -0.56
SSBP2-218ENST00000514493 TYMSOSQ8TAI1 123 aa11.53□□□□□ -0.56
SSBP2-218ENST00000514493 BPY2O14599 106 aa11.52□□□□□ -0.57
SSBP2-218ENST00000514493 HRCT1Q6UXD1 115 aa11.51□□□□□ -0.57
SSBP2-218ENST00000514493 FLG2Q5D862 2391 aaPredicted RBP11.51□□□□□ -0.57
SSBP2-218ENST00000514493 HIST1H4AP62805 103 aaKnown RBP11.5□□□□□ -0.57
SSBP2-218ENST00000514493 CD164Q04900 197 aa11.49□□□□□ -0.57
SSBP2-218ENST00000514493 MYCBP2O75592 4640 aa11.49□□□□□ -0.57
SSBP2-218ENST00000514493 SS18L2Q9UHA2 77 aa11.49□□□□□ -0.57
SSBP2-218ENST00000514493 LRP1Q07954 4544 aaKnown RBP11.46□□□□□ -0.58
SSBP2-218ENST00000514493 A0A087WVE0 104 aa11.45□□□□□ -0.58
SSBP2-218ENST00000514493 FAT3Q8TDW7 4589 aa11.45□□□□□ -0.58
SSBP2-218ENST00000514493 LINC00472Q9H8W2 130 aa11.44□□□□□ -0.58
SSBP2-218ENST00000514493 FAM236AA0A1B0GUQ0 79 aa11.43□□□□□ -0.58
SSBP2-218ENST00000514493 FAM236BA0A1B0GV22 79 aa11.43□□□□□ -0.58
SSBP2-218ENST00000514493 DSCR10P59022 87 aa11.41□□□□□ -0.58
SSBP2-218ENST00000514493 Q8N9L7 120 aa11.41□□□□□ -0.58
SSBP2-218ENST00000514493 LINC00304Q8N9R0 145 aa11.41□□□□□ -0.58
SSBP2-218ENST00000514493 DEFB116Q30KQ4 102 aa11.41□□□□□ -0.58
SSBP2-218ENST00000514493 IGKV4-1P06312 121 aa11.4□□□□□ -0.58
SSBP2-218ENST00000514493 TNXBP22105 4242 aa11.4□□□□□ -0.59
SSBP2-218ENST00000514493 C4orf48Q5BLP8 95 aa11.39□□□□□ -0.59
SSBP2-218ENST00000514493 Q96NJ1 140 aa11.38□□□□□ -0.59
SSBP2-218ENST00000514493 J3KT08 172 aa11.37□□□□□ -0.59
SSBP2-218ENST00000514493 SPINK1P00995 79 aa11.36□□□□□ -0.59
SSBP2-218ENST00000514493 KRTAP10-8P60410 259 aa11.36□□□□□ -0.59
SSBP2-218ENST00000514493 SPAG11AQ6PDA7 123 aa11.36□□□□□ -0.59
SSBP2-218ENST00000514493 K7EQZ3 153 aa11.36□□□□□ -0.59
SSBP2-218ENST00000514493 Q5XG85 94 aa11.35□□□□□ -0.59
SSBP2-218ENST00000514493 PCP4P48539 62 aa11.33□□□□□ -0.59
SSBP2-218ENST00000514493 ASB16-AS1Q495Z4 193 aa11.33□□□□□ -0.59
SSBP2-218ENST00000514493 LIMD2Q9BT23 127 aa11.33□□□□□ -0.59
SSBP2-218ENST00000514493 RPS29P62273 56 aaKnown RBP11.33□□□□□ -0.6
SSBP2-218ENST00000514493 A8MWP4 228 aa11.32□□□□□ -0.6
SSBP2-218ENST00000514493 OXTP01178 125 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms