RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 ICE1Q9Y2F5 2266 aa1.86□□□□□ -2.11
NIPBL-207ENST00000513819 CACNA1EQ15878 2313 aa1.85□□□□□ -2.11
NIPBL-207ENST00000513819 CNOT1A5YKK6 2376 aaKnown RBP1.85□□□□□ -2.11
NIPBL-207ENST00000513819 FLG2Q5D862 2391 aaPredicted RBP1.84□□□□□ -2.11
NIPBL-207ENST00000513819 H3BUX3 64 aa1.84□□□□□ -2.11
NIPBL-207ENST00000513819 PRLHP81277 87 aa1.84□□□□□ -2.11
NIPBL-207ENST00000513819 WDR87Q6ZQQ6 2873 aa1.83□□□□□ -2.12
NIPBL-207ENST00000513819 NOP10Q9NPE3 64 aaKnown RBP1.82□□□□□ -2.12
NIPBL-207ENST00000513819 WNK2Q9Y3S1 2297 aa1.8□□□□□ -2.12
NIPBL-207ENST00000513819 SPINK1P00995 79 aa1.8□□□□□ -2.12
NIPBL-207ENST00000513819 DEFB136Q30KP8 78 aa1.8□□□□□ -2.12
NIPBL-207ENST00000513819 S4R3F8 94 aa1.8□□□□□ -2.12
NIPBL-207ENST00000513819 SPTBN1Q01082 2364 aaKnown RBP1.79□□□□□ -2.12
NIPBL-207ENST00000513819 DEFB133Q30KQ1 61 aa1.79□□□□□ -2.12
NIPBL-207ENST00000513819 COL6A6A6NMZ7 2263 aa1.79□□□□□ -2.12
NIPBL-207ENST00000513819 TPRP12270 2363 aaKnown RBP1.79□□□□□ -2.12
NIPBL-207ENST00000513819 BAHCC1Q9P281 2608 aa1.78□□□□□ -2.12
NIPBL-207ENST00000513819 IGF2RP11717 2491 aa1.78□□□□□ -2.12
NIPBL-207ENST00000513819 KRTAP12-1P59990 96 aa1.78□□□□□ -2.12
NIPBL-207ENST00000513819 KRTAP12-4P60329 112 aa1.78□□□□□ -2.12
NIPBL-207ENST00000513819 PRO0255Q9UI72 69 aa1.78□□□□□ -2.12
NIPBL-207ENST00000513819 CACNA1BQ00975 2339 aa1.78□□□□□ -2.13
NIPBL-207ENST00000513819 PCNX1Q96RV3 2341 aa1.78□□□□□ -2.13
NIPBL-207ENST00000513819 DEFB103AP81534 67 aa1.77□□□□□ -2.13
NIPBL-207ENST00000513819 APLNQ9ULZ1 77 aa1.76□□□□□ -2.13
NIPBL-207ENST00000513819 CACNA1GO43497 2377 aa1.76□□□□□ -2.13
NIPBL-207ENST00000513819 MGAQ8IWI9 3026 aa1.75□□□□□ -2.13
NIPBL-207ENST00000513819 KRTAP13-4Q3LI77 160 aa1.75□□□□□ -2.13
NIPBL-207ENST00000513819 MUC19Q7Z5P9 8384 aa1.74□□□□□ -2.13
NIPBL-207ENST00000513819 FBN1P35555 2871 aaKnown RBP1.73□□□□□ -2.13
NIPBL-207ENST00000513819 A0A0D9SG42 100 aa1.72□□□□□ -2.13
NIPBL-207ENST00000513819 ZDBF2Q9HCK1 2354 aa1.72□□□□□ -2.13
NIPBL-207ENST00000513819 CEP350Q5VT06 3117 aa1.71□□□□□ -2.14
NIPBL-207ENST00000513819 KRTAP5-7Q6L8G8 165 aa1.71□□□□□ -2.14
NIPBL-207ENST00000513819 U3KQA8 63 aa1.71□□□□□ -2.14
NIPBL-207ENST00000513819 COL6A3P12111 3177 aa1.71□□□□□ -2.14
NIPBL-207ENST00000513819 A0A096LPF7 62 aa1.7□□□□□ -2.14
NIPBL-207ENST00000513819 J3QKU1 62 aa1.7□□□□□ -2.14
NIPBL-207ENST00000513819 FN1P02751 2386 aaKnown RBP1.7□□□□□ -2.14
NIPBL-207ENST00000513819 Q5VSD8 79 aa1.69□□□□□ -2.14
NIPBL-207ENST00000513819 A0A096LNI7 61 aa1.68□□□□□ -2.14
NIPBL-207ENST00000513819 AKAP6Q13023 2319 aa1.67□□□□□ -2.14
NIPBL-207ENST00000513819 CHD7Q9P2D1 2997 aa1.67□□□□□ -2.14
NIPBL-207ENST00000513819 SRCAPQ6ZRS2 3230 aa1.67□□□□□ -2.14
NIPBL-207ENST00000513819 SPTBN2O15020 2390 aa1.66□□□□□ -2.14
NIPBL-207ENST00000513819 PTPRZ1P23471 2315 aaPredicted RBP1.66□□□□□ -2.14
NIPBL-207ENST00000513819 ACACAQ13085 2346 aa1.65□□□□□ -2.15
NIPBL-207ENST00000513819 SPINK6Q6UWN8 80 aa1.65□□□□□ -2.15
NIPBL-207ENST00000513819 FAM208BQ5VWN6 2430 aa1.65□□□□□ -2.15
NIPBL-207ENST00000513819 OTOGLQ3ZCN5 2332 aa1.65□□□□□ -2.15
NIPBL-207ENST00000513819 H3BNG1 76 aa1.64□□□□□ -2.15
NIPBL-207ENST00000513819 LINC01556Q5JQF7 62 aa1.64□□□□□ -2.15
NIPBL-207ENST00000513819 DEFB124Q8NES8 71 aa1.64□□□□□ -2.15
NIPBL-207ENST00000513819 GOLGB1Q14789 3259 aaKnown RBP1.64□□□□□ -2.15
NIPBL-207ENST00000513819 PCNTO95613 3336 aa1.64□□□□□ -2.15
NIPBL-207ENST00000513819 PIEZO2Q9H5I5 2752 aa1.64□□□□□ -2.15
NIPBL-207ENST00000513819 PKDREJQ9NTG1 2253 aa1.63□□□□□ -2.15
NIPBL-207ENST00000513819 NBEAQ8NFP9 2946 aa1.63□□□□□ -2.15
NIPBL-207ENST00000513819 CFAP54Q96N23 3096 aa1.63□□□□□ -2.15
NIPBL-207ENST00000513819 MAP1BP46821 2468 aaKnown RBP1.62□□□□□ -2.15
NIPBL-207ENST00000513819 M0QZ58 72 aa1.62□□□□□ -2.15
NIPBL-207ENST00000513819 SPTA1P02549 2419 aa1.62□□□□□ -2.15
NIPBL-207ENST00000513819 CENPFP49454 3210 aa1.62□□□□□ -2.15
NIPBL-207ENST00000513819 CHD6Q8TD26 2715 aa1.6□□□□□ -2.15
NIPBL-207ENST00000513819 TENM2Q9NT68 2774 aa1.6□□□□□ -2.15
NIPBL-207ENST00000513819 TNRC18O15417 2968 aaPredicted RBP1.6□□□□□ -2.15
NIPBL-207ENST00000513819 ZZEF1O43149 2961 aa1.6□□□□□ -2.15
NIPBL-207ENST00000513819 CEP250Q9BV73 2442 aa1.6□□□□□ -2.15
NIPBL-207ENST00000513819 VPS13DQ5THJ4 4388 aa1.59□□□□□ -2.15
NIPBL-207ENST00000513819 VPS13AQ96RL7 3174 aa1.59□□□□□ -2.15
NIPBL-207ENST00000513819 SPTBN4Q9H254 2564 aa1.58□□□□□ -2.16
NIPBL-207ENST00000513819 GVINP1Q7Z2Y8 2422 aa1.58□□□□□ -2.16
NIPBL-207ENST00000513819 ZNF462Q96JM2 2506 aa1.58□□□□□ -2.16
NIPBL-207ENST00000513819 FAM186AA6NE01 2351 aa1.57□□□□□ -2.16
NIPBL-207ENST00000513819 C2CD3Q4AC94 2353 aa1.57□□□□□ -2.16
NIPBL-207ENST00000513819 JMJD1CQ15652 2540 aa1.57□□□□□ -2.16
NIPBL-207ENST00000513819 SPART-AS1P0CW21 52 aa1.57□□□□□ -2.16
NIPBL-207ENST00000513819 ASH1LQ9NR48 2969 aaKnown RBP1.57□□□□□ -2.16
NIPBL-207ENST00000513819 APC2O95996 2303 aa1.57□□□□□ -2.16
NIPBL-207ENST00000513819 ROS1P08922 2347 aa1.57□□□□□ -2.16
NIPBL-207ENST00000513819 UTRNP46939 3433 aa1.56□□□□□ -2.16
NIPBL-207ENST00000513819 PRUNE2Q8WUY3 3088 aa1.56□□□□□ -2.16
NIPBL-207ENST00000513819 OTOGQ6ZRI0 2925 aa1.56□□□□□ -2.16
NIPBL-207ENST00000513819 CSPG4Q6UVK1 2322 aa1.55□□□□□ -2.16
NIPBL-207ENST00000513819 CACNA1HO95180 2353 aa1.55□□□□□ -2.16
NIPBL-207ENST00000513819 MAP1AP78559 2803 aaPredicted RBP1.54□□□□□ -2.16
NIPBL-207ENST00000513819 DSPP15924 2871 aaKnown RBP1.54□□□□□ -2.16
NIPBL-207ENST00000513819 CELSR2Q9HCU4 2923 aa1.54□□□□□ -2.16
NIPBL-207ENST00000513819 FRYLO94915 3013 aa1.54□□□□□ -2.16
NIPBL-207ENST00000513819 CFAP47Q6ZTR5 3102 aa1.54□□□□□ -2.16
NIPBL-207ENST00000513819 RANBP2P49792 3224 aaKnown RBP1.54□□□□□ -2.16
NIPBL-207ENST00000513819 DNAH12Q6ZR08 3092 aa1.53□□□□□ -2.16
NIPBL-207ENST00000513819 SZT2Q5T011 3432 aa1.53□□□□□ -2.17
NIPBL-207ENST00000513819 MKI67P46013 3256 aaKnown RBP1.53□□□□□ -2.17
NIPBL-207ENST00000513819 KALRNO60229 2985 aa1.53□□□□□ -2.17
NIPBL-207ENST00000513819 RP1L1Q8IWN7 2480 aaPredicted RBP1.52□□□□□ -2.17
NIPBL-207ENST00000513819 MUC6Q6W4X9 2439 aa1.52□□□□□ -2.17
NIPBL-207ENST00000513819 UBR5O95071 2799 aaPredicted RBP1.52□□□□□ -2.17
NIPBL-207ENST00000513819 HTN3P15516 51 aa1.52□□□□□ -2.17
NIPBL-207ENST00000513819 MYCBP2O75592 4640 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms