RNA–Protein interactions for RNA: ENST00000511249.5

MATR3-216, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-216ENST00000511249 MGAQ8IWI9 3026 aa2.22□□□□□ -2.05
MATR3-216ENST00000511249 LY6G6CO95867 125 aa2.22□□□□□ -2.05
MATR3-216ENST00000511249 SPRR1BP22528 89 aa2.22□□□□□ -2.05
MATR3-216ENST00000511249 A0A087WTM6 91 aa2.21□□□□□ -2.06
MATR3-216ENST00000511249 LELP1Q5T871 98 aa2.21□□□□□ -2.06
MATR3-216ENST00000511249 MRPL34Q9BQ48 92 aaKnown RBP2.21□□□□□ -2.06
MATR3-216ENST00000511249 RPL37AP61513 92 aaKnown RBP2.2□□□□□ -2.06
MATR3-216ENST00000511249 DEFB132Q7Z7B7 95 aa2.2□□□□□ -2.06
MATR3-216ENST00000511249 KRTAP13-4Q3LI77 160 aa2.19□□□□□ -2.06
MATR3-216ENST00000511249 DNAH14Q0VDD8 3507 aa2.19□□□□□ -2.06
MATR3-216ENST00000511249 HTTP42858 3142 aa2.19□□□□□ -2.06
MATR3-216ENST00000511249 PKDREJQ9NTG1 2253 aa2.19□□□□□ -2.06
MATR3-216ENST00000511249 SPTBN2O15020 2390 aa2.18□□□□□ -2.06
MATR3-216ENST00000511249 MAP1BP46821 2468 aaKnown RBP2.18□□□□□ -2.06
MATR3-216ENST00000511249 MKI67P46013 3256 aaKnown RBP2.18□□□□□ -2.06
MATR3-216ENST00000511249 SDK1Q7Z5N4 2213 aa2.18□□□□□ -2.06
MATR3-216ENST00000511249 BAHCC1Q9P281 2608 aa2.18□□□□□ -2.06
MATR3-216ENST00000511249 CEP250Q9BV73 2442 aa2.17□□□□□ -2.06
MATR3-216ENST00000511249 FRYLO94915 3013 aa2.17□□□□□ -2.06
MATR3-216ENST00000511249 USP34Q70CQ2 3546 aa2.17□□□□□ -2.06
MATR3-216ENST00000511249 FRYQ5TBA9 3013 aa2.17□□□□□ -2.06
MATR3-216ENST00000511249 CHD7Q9P2D1 2997 aa2.16□□□□□ -2.06
MATR3-216ENST00000511249 SPTBN5Q9NRC6 3674 aaKnown RBP2.16□□□□□ -2.06
MATR3-216ENST00000511249 CFAP47Q6ZTR5 3102 aa2.15□□□□□ -2.06
MATR3-216ENST00000511249 WDFY4Q6ZS81 3184 aa2.15□□□□□ -2.06
MATR3-216ENST00000511249 Q96NJ1 140 aa2.15□□□□□ -2.07
MATR3-216ENST00000511249 TRANK1O15050 2925 aa2.15□□□□□ -2.07
MATR3-216ENST00000511249 CHD9Q3L8U1 2897 aa2.15□□□□□ -2.07
MATR3-216ENST00000511249 KALRNO60229 2985 aa2.14□□□□□ -2.07
MATR3-216ENST00000511249 COX6B2Q6YFQ2 88 aa2.14□□□□□ -2.07
MATR3-216ENST00000511249 LAMA2P24043 3122 aaKnown RBP2.13□□□□□ -2.07
MATR3-216ENST00000511249 NBDYA0A0U1RRE5 68 aa2.13□□□□□ -2.07
MATR3-216ENST00000511249 H0YAA0 97 aa2.13□□□□□ -2.07
MATR3-216ENST00000511249 H3BNG1 76 aa2.13□□□□□ -2.07
MATR3-216ENST00000511249 DEFB130BP0DP73 79 aa2.13□□□□□ -2.07
MATR3-216ENST00000511249 DEFB130AP0DP74 79 aa2.13□□□□□ -2.07
MATR3-216ENST00000511249 DEFB136Q30KP8 78 aa2.13□□□□□ -2.07
MATR3-216ENST00000511249 KRTAP6-3Q3LI67 103 aa2.13□□□□□ -2.07
MATR3-216ENST00000511249 KRTAP5-7Q6L8G8 165 aa2.13□□□□□ -2.07
MATR3-216ENST00000511249 SSBP3-AS1Q7Z2R9 100 aa2.13□□□□□ -2.07
MATR3-216ENST00000511249 TRIOO75962 3097 aa2.13□□□□□ -2.07
MATR3-216ENST00000511249 TPRP12270 2363 aaKnown RBP2.13□□□□□ -2.07
MATR3-216ENST00000511249 LAMA3Q16787 3333 aa2.12□□□□□ -2.07
MATR3-216ENST00000511249 CNOT1A5YKK6 2376 aaKnown RBP2.12□□□□□ -2.07
MATR3-216ENST00000511249 ROS1P08922 2347 aa2.11□□□□□ -2.07
MATR3-216ENST00000511249 PCNX1Q96RV3 2341 aa2.11□□□□□ -2.07
MATR3-216ENST00000511249 C10orf99Q6UWK7 81 aa2.11□□□□□ -2.07
MATR3-216ENST00000511249 PP632Q6XCG6 107 aa2.11□□□□□ -2.07
MATR3-216ENST00000511249 Q6ZSA8 131 aa2.11□□□□□ -2.07
MATR3-216ENST00000511249 ANKRD17O75179 2603 aaKnown RBP2.11□□□□□ -2.07
MATR3-216ENST00000511249 BRCA2P51587 3418 aa2.11□□□□□ -2.07
MATR3-216ENST00000511249 RP1L1Q8IWN7 2480 aaPredicted RBP2.1□□□□□ -2.07
MATR3-216ENST00000511249 A0A096LPF7 62 aa2.1□□□□□ -2.07
MATR3-216ENST00000511249 KRTAP12-1P59990 96 aa2.1□□□□□ -2.07
MATR3-216ENST00000511249 H1FX-AS1Q4G0G2 97 aa2.1□□□□□ -2.07
MATR3-216ENST00000511249 PRUNE2Q8WUY3 3088 aa2.1□□□□□ -2.07
MATR3-216ENST00000511249 FREM2Q5SZK8 3169 aa2.1□□□□□ -2.07
MATR3-216ENST00000511249 DCHS1Q96JQ0 3298 aa2.09□□□□□ -2.07
MATR3-216ENST00000511249 INE1O15225 51 aa2.09□□□□□ -2.07
MATR3-216ENST00000511249 LINC01556Q5JQF7 62 aa2.09□□□□□ -2.07
MATR3-216ENST00000511249 EP300Q09472 2414 aaPredicted RBP2.09□□□□□ -2.08
MATR3-216ENST00000511249 COL6A6A6NMZ7 2263 aa2.08□□□□□ -2.08
MATR3-216ENST00000511249 C5orf42Q9H799 3197 aa2.08□□□□□ -2.08
MATR3-216ENST00000511249 APC2O95996 2303 aa2.08□□□□□ -2.08
MATR3-216ENST00000511249 AKAP6Q13023 2319 aa2.08□□□□□ -2.08
MATR3-216ENST00000511249 C2CD3Q4AC94 2353 aa2.08□□□□□ -2.08
MATR3-216ENST00000511249 DMDP11532 3685 aa2.08□□□□□ -2.08
MATR3-216ENST00000511249 VCANP13611 3396 aa2.07□□□□□ -2.08
MATR3-216ENST00000511249 LAMA1P25391 3075 aa2.07□□□□□ -2.08
MATR3-216ENST00000511249 PIEZO2Q9H5I5 2752 aa2.07□□□□□ -2.08
MATR3-216ENST00000511249 ANKHD1Q8IWZ3 2542 aaKnown RBP2.07□□□□□ -2.08
MATR3-216ENST00000511249 SPART-AS1P0CW21 52 aa2.07□□□□□ -2.08
MATR3-216ENST00000511249 CRIPTQ9P021 101 aa2.07□□□□□ -2.08
MATR3-216ENST00000511249 CREBBPQ92793 2442 aa2.07□□□□□ -2.08
MATR3-216ENST00000511249 AKAP13Q12802 2813 aa2.06□□□□□ -2.08
MATR3-216ENST00000511249 PTPRZ1P23471 2315 aaPredicted RBP2.06□□□□□ -2.08
MATR3-216ENST00000511249 K7EIL1 84 aa2.06□□□□□ -2.08
MATR3-216ENST00000511249 RPL37P61927 97 aaKnown RBP2.06□□□□□ -2.08
MATR3-216ENST00000511249 PRLHP81277 87 aa2.06□□□□□ -2.08
MATR3-216ENST00000511249 WDFY3Q8IZQ1 3526 aa2.06□□□□□ -2.08
MATR3-216ENST00000511249 DSPP15924 2871 aaKnown RBP2.06□□□□□ -2.08
MATR3-216ENST00000511249 ACACAQ13085 2346 aa2.06□□□□□ -2.08
MATR3-216ENST00000511249 CACNA1HO95180 2353 aa2.05□□□□□ -2.08
MATR3-216ENST00000511249 NCOR1O75376 2440 aa2.05□□□□□ -2.08
MATR3-216ENST00000511249 TRIOBPQ9H2D6 2365 aa2.05□□□□□ -2.08
MATR3-216ENST00000511249 MAP1AP78559 2803 aaPredicted RBP2.04□□□□□ -2.08
MATR3-216ENST00000511249 SPEGQ15772 3267 aa2.04□□□□□ -2.08
MATR3-216ENST00000511249 KRTAP13-1Q8IUC0 172 aa2.04□□□□□ -2.08
MATR3-216ENST00000511249 CHD6Q8TD26 2715 aa2.04□□□□□ -2.08
MATR3-216ENST00000511249 DMXL2Q8TDJ6 3036 aa2.04□□□□□ -2.08
MATR3-216ENST00000511249 SPENQ96T58 3664 aaKnown RBP2.04□□□□□ -2.08
MATR3-216ENST00000511249 CDH23Q9H251 3354 aa2.04□□□□□ -2.08
MATR3-216ENST00000511249 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.03□□□□□ -2.086e-8■■■■□ 19.8
MATR3-216ENST00000511249 DEFB124Q8NES8 71 aa2.03□□□□□ -2.08
MATR3-216ENST00000511249 AKAP9Q99996 3911 aa2.03□□□□□ -2.08
MATR3-216ENST00000511249 REV3LO60673 3130 aa2.02□□□□□ -2.09
MATR3-216ENST00000511249 BOD1L1Q8NFC6 3051 aa2.02□□□□□ -2.09
MATR3-216ENST00000511249 TACC2O95359 2948 aa2.02□□□□□ -2.09
MATR3-216ENST00000511249 SPTA1P02549 2419 aa2.02□□□□□ -2.09
MATR3-216ENST00000511249 ZFHX4Q86UP3 3567 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 173 ms