RNA–Protein interactions for RNA: ENST00000509620.6

OTUD4-208, Transcript of OTU deubiquitinase 4, humanhuman

TSL 1 (best) BASIC

Gene OTUD4, Length 864 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-208ENST00000509620 INO80Q9ULG1 1556 aaPredicted RBP0.28□□□□□ -2.37
OTUD4-208ENST00000509620 RNF17Q9BXT8 1623 aaKnown RBP0.27□□□□□ -2.37
OTUD4-208ENST00000509620 TRANK1O15050 2925 aa0.27□□□□□ -2.37
OTUD4-208ENST00000509620 SMIM5Q71RC9 77 aa0.27□□□□□ -2.37
OTUD4-208ENST00000509620 PDE4DIPQ5VU43 2346 aa0.27□□□□□ -2.37
OTUD4-208ENST00000509620 TNXBP22105 4242 aa0.27□□□□□ -2.37
OTUD4-208ENST00000509620 EP300Q09472 2414 aaPredicted RBP0.27□□□□□ -2.37
OTUD4-208ENST00000509620 SFTA3P0C7M3 94 aa0.26□□□□□ -2.37
OTUD4-208ENST00000509620 NCBP2-AS2Q69YL0 99 aa0.26□□□□□ -2.37
OTUD4-208ENST00000509620 K7EMI3 77 aa0.25□□□□□ -2.37
OTUD4-208ENST00000509620 WNK1Q9H4A3 2382 aa0.25□□□□□ -2.37
OTUD4-208ENST00000509620 SYNE2Q8WXH0 6885 aaKnown RBP0.24□□□□□ -2.37
OTUD4-208ENST00000509620 ABCC6O95255 1503 aa0.24□□□□□ -2.37
OTUD4-208ENST00000509620 DMBT1Q9UGM3 2413 aaPredicted RBP0.24□□□□□ -2.37
OTUD4-208ENST00000509620 MINOS1Q5TGZ0 78 aa0.24□□□□□ -2.37
OTUD4-208ENST00000509620 CCDC180Q9P1Z9 1646 aa0.24□□□□□ -2.37
OTUD4-208ENST00000509620 CACNA1AO00555 2505 aa0.23□□□□□ -2.37
OTUD4-208ENST00000509620 FCER1GP30273 86 aa0.23□□□□□ -2.37
OTUD4-208ENST00000509620 SERF2P84101 59 aa0.23□□□□□ -2.37
OTUD4-208ENST00000509620 BSNQ9UPA5 3926 aa0.23□□□□□ -2.37
OTUD4-208ENST00000509620 COL7A1Q02388 2944 aa0.23□□□□□ -2.37
OTUD4-208ENST00000509620 KIAA0586Q9BVV6 1533 aa0.23□□□□□ -2.37
OTUD4-208ENST00000509620 SPRR2BP35325 72 aa0.22□□□□□ -2.37
OTUD4-208ENST00000509620 NMES1Q9C002 83 aa0.22□□□□□ -2.37
OTUD4-208ENST00000509620 MACF1Q9UPN3 7388 aaKnown RBP0.22□□□□□ -2.37
OTUD4-208ENST00000509620 APC2O95996 2303 aa0.22□□□□□ -2.37
OTUD4-208ENST00000509620 SETXQ7Z333 2677 aaKnown RBP0.22□□□□□ -2.37
OTUD4-208ENST00000509620 BPTFQ12830 3046 aa0.21□□□□□ -2.38
OTUD4-208ENST00000509620 MAP1BP46821 2468 aaKnown RBP0.21□□□□□ -2.38
OTUD4-208ENST00000509620 FSIP2Q5CZC0 6907 aa0.21□□□□□ -2.38
OTUD4-208ENST00000509620 HUWE1Q7Z6Z7 4374 aaKnown RBP0.21□□□□□ -2.38
OTUD4-208ENST00000509620 DCHS2Q6V1P9 2916 aa0.21□□□□□ -2.38
OTUD4-208ENST00000509620 MYCBP2O75592 4640 aa0.21□□□□□ -2.38
OTUD4-208ENST00000509620 M0R1W7 72 aa0.2□□□□□ -2.38
OTUD4-208ENST00000509620 C3P01024 1663 aa0.2□□□□□ -2.38
OTUD4-208ENST00000509620 FAT2Q9NYQ8 4349 aa0.2□□□□□ -2.38
OTUD4-208ENST00000509620 DSPP15924 2871 aaKnown RBP0.19□□□□□ -2.38
OTUD4-208ENST00000509620 PRLHP81277 87 aa0.19□□□□□ -2.38
OTUD4-208ENST00000509620 ABCA6Q8N139 1617 aa0.19□□□□□ -2.38
OTUD4-208ENST00000509620 C6orf48Q9UBA6 75 aa0.18□□□□□ -2.38
OTUD4-208ENST00000509620 ACANP16112 2415 aa0.17□□□□□ -2.38
OTUD4-208ENST00000509620 AKAP13Q12802 2813 aa0.17□□□□□ -2.38
OTUD4-208ENST00000509620 WT1-ASQ06250 92 aa0.17□□□□□ -2.38
OTUD4-208ENST00000509620 SPRR2GQ9BYE4 73 aa0.17□□□□□ -2.38
OTUD4-208ENST00000509620 PCNX1Q96RV3 2341 aa0.16□□□□□ -2.38
OTUD4-208ENST00000509620 SSPOA2VEC9 5147 aa0.16□□□□□ -2.38
OTUD4-208ENST00000509620 FLNBO75369 2602 aaKnown RBP0.16□□□□□ -2.38
OTUD4-208ENST00000509620 RPS27P42677 84 aaKnown RBP0.16□□□□□ -2.38
OTUD4-208ENST00000509620 RPS27LQ71UM5 84 aaKnown RBP0.16□□□□□ -2.38
OTUD4-208ENST00000509620 S4R3F8 94 aa0.16□□□□□ -2.38
OTUD4-208ENST00000509620 KMT2AQ03164 3969 aa0.16□□□□□ -2.38
OTUD4-208ENST00000509620 PRKDCP78527 4128 aaKnown RBP0.15□□□□□ -2.38
OTUD4-208ENST00000509620 DEFB106AQ8N104 65 aa0.15□□□□□ -2.39
OTUD4-208ENST00000509620 HMCN2Q8NDA2 5059 aa0.15□□□□□ -2.39
OTUD4-208ENST00000509620 ABCA10Q8WWZ4 1543 aa0.13□□□□□ -2.39
OTUD4-208ENST00000509620 FLNCQ14315 2725 aa0.13□□□□□ -2.39
OTUD4-208ENST00000509620 TIAM1Q13009 1591 aa0.13□□□□□ -2.39
OTUD4-208ENST00000509620 TNRC18O15417 2968 aaPredicted RBP0.13□□□□□ -2.39
OTUD4-208ENST00000509620 CPS1P31327 1500 aa0.13□□□□□ -2.39
OTUD4-208ENST00000509620 LPAP08519 4548 aa0.12□□□□□ -2.39
OTUD4-208ENST00000509620 C9orf92A6NGG3 77 aa0.12□□□□□ -2.39
OTUD4-208ENST00000509620 H3BNG1 76 aa0.12□□□□□ -2.39
OTUD4-208ENST00000509620 PRRC2CQ9Y520 2896 aaKnown RBP0.12□□□□□ -2.39
OTUD4-208ENST00000509620 NSD1Q96L73 2696 aaPredicted RBP0.12□□□□□ -2.39
OTUD4-208ENST00000509620 GLI2P10070 1586 aa0.11□□□□□ -2.39
OTUD4-208ENST00000509620 FLNAP21333 2647 aaKnown RBP0.11□□□□□ -2.39
OTUD4-208ENST00000509620 IGIPA6NJ69 53 aa0.11□□□□□ -2.39
OTUD4-208ENST00000509620 H3BUA1 57 aa0.11□□□□□ -2.39
OTUD4-208ENST00000509620 TIMM8BQ9Y5J9 83 aaPredicted RBP0.11□□□□□ -2.39
OTUD4-208ENST00000509620 ITSN2Q9NZM3 1697 aa0.11□□□□□ -2.39
OTUD4-208ENST00000509620 HECTD1Q9ULT8 2610 aa0.1□□□□□ -2.39
OTUD4-208ENST00000509620 TMEM167BQ9NRX6 74 aa0.1□□□□□ -2.39
OTUD4-208ENST00000509620 ALS2Q96Q42 1657 aa0.1□□□□□ -2.39
OTUD4-208ENST00000509620 NBASA2RRP1 2371 aa0.1□□□□□ -2.39
OTUD4-208ENST00000509620 LY75O60449 1722 aa0.1□□□□□ -2.39
OTUD4-208ENST00000509620 PRXQ9BXM0 1461 aa0.1□□□□□ -2.39
OTUD4-208ENST00000509620 KIF1AQ12756 1690 aa0.09□□□□□ -2.39
OTUD4-208ENST00000509620 EEA1Q15075 1411 aa0.09□□□□□ -2.4
OTUD4-208ENST00000509620 UGGT1Q9NYU2 1555 aa0.09□□□□□ -2.4
OTUD4-208ENST00000509620 ANKRD36CQ5JPF3 1778 aa0.09□□□□□ -2.4
OTUD4-208ENST00000509620 HSPG2P98160 4391 aa0.08□□□□□ -2.4
OTUD4-208ENST00000509620 CLASP1Q7Z460 1538 aa0.08□□□□□ -2.4
OTUD4-208ENST00000509620 H0YGX0 51 aa0.07□□□□□ -2.4
OTUD4-208ENST00000509620 ALMS1Q8TCU4 4167 aa0.06□□□□□ -2.4
OTUD4-208ENST00000509620 CROCC2H7BZ55 1655 aa0.06□□□□□ -2.4
OTUD4-208ENST00000509620 SPRR2AP35326 72 aa0.06□□□□□ -2.4
OTUD4-208ENST00000509620 LINC00308Q8TCZ7 52 aa0.06□□□□□ -2.4
OTUD4-208ENST00000509620 ZANQ9Y493 2812 aa0.05□□□□□ -2.4
OTUD4-208ENST00000509620 COL6A3P12111 3177 aa0.05□□□□□ -2.4
OTUD4-208ENST00000509620 TENM2Q9NT68 2774 aa0.05□□□□□ -2.4
OTUD4-208ENST00000509620 KRTAP6-2Q3LI66 62 aa0.04□□□□□ -2.4
OTUD4-208ENST00000509620 NF1P21359 2839 aa0.04□□□□□ -2.4
OTUD4-208ENST00000509620 ABRACLQ9P1F3 81 aa0.03□□□□□ -2.4
OTUD4-208ENST00000509620 TOGARAM1Q9Y4F4 1720 aa0.02□□□□□ -2.41
OTUD4-208ENST00000509620 NOP10Q9NPE3 64 aaKnown RBP0.02□□□□□ -2.41
OTUD4-208ENST00000509620 SPTBN4Q9H254 2564 aa0.02□□□□□ -2.41
OTUD4-208ENST00000509620 DSTQ03001 7570 aaKnown RBP0.02□□□□□ -2.41
OTUD4-208ENST00000509620 HECTD4Q9Y4D8 3996 aa0.02□□□□□ -2.41
OTUD4-208ENST00000509620 CREBBPQ92793 2442 aa0.02□□□□□ -2.41
OTUD4-208ENST00000509620 CDC42BPAQ5VT25 1732 aa0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms