RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 BAALC-AS2P0C853 105 aa12.1□□□□□ -0.47
CDC42SE2-206ENST00000503291 TMEM256-PLSCR3K7ERE1 68 aa12.1□□□□□ -0.47
CDC42SE2-206ENST00000503291 CRYGAP11844 174 aa12.1□□□□□ -0.47
CDC42SE2-206ENST00000503291 GTF2H5Q6ZYL4 71 aa12.09□□□□□ -0.47
CDC42SE2-206ENST00000503291 LAMTOR3Q9UHA4 124 aa12.09□□□□□ -0.47
CDC42SE2-206ENST00000503291 H3BQ85 93 aa12.08□□□□□ -0.48
CDC42SE2-206ENST00000503291 ABCA13Q86UQ4 5058 aa12.08□□□□□ -0.48
CDC42SE2-206ENST00000503291 PRR26Q8N8Z3 221 aa12.08□□□□□ -0.48
CDC42SE2-206ENST00000503291 LINC01600Q96MT4 127 aa12.08□□□□□ -0.48
CDC42SE2-206ENST00000503291 LRP1Q07954 4544 aaKnown RBP12.07□□□□□ -0.48
CDC42SE2-206ENST00000503291 A0A1B0GV90 55 aa12.07□□□□□ -0.48
CDC42SE2-206ENST00000503291 MTURNQ8N3F0 131 aa12.07□□□□□ -0.48
CDC42SE2-206ENST00000503291 IGLV9-49A0A0B4J1Y8 123 aa12.06□□□□□ -0.48
CDC42SE2-206ENST00000503291 KRTAP13-2Q52LG2 175 aa12.06□□□□□ -0.48
CDC42SE2-206ENST00000503291 MYCBP2O75592 4640 aa12.05□□□□□ -0.48
CDC42SE2-206ENST00000503291 NDUFV3P56181 108 aaKnown RBP12.04□□□□□ -0.48
CDC42SE2-206ENST00000503291 UBE2V1Q13404 147 aa12.03□□□□□ -0.48
CDC42SE2-206ENST00000503291 MOBPQ13875 183 aa12.01□□□□□ -0.49
CDC42SE2-206ENST00000503291 F8WEM9 126 aa12.01□□□□□ -0.49
CDC42SE2-206ENST00000503291 C9orf153Q5TBE3 101 aa12.01□□□□□ -0.49
CDC42SE2-206ENST00000503291 H3BT86 120 aa12□□□□□ -0.49
CDC42SE2-206ENST00000503291 ANKRD29Q8N6D5 301 aa12□□□□□ -0.49
CDC42SE2-206ENST00000503291 TYMSOSQ8TAI1 123 aa12□□□□□ -0.49
CDC42SE2-206ENST00000503291 FAT3Q8TDW7 4589 aa12□□□□□ -0.49
CDC42SE2-206ENST00000503291 OXTP01178 125 aa11.99□□□□□ -0.49
CDC42SE2-206ENST00000503291 PRO0461Q9UI25 63 aa11.99□□□□□ -0.49
CDC42SE2-206ENST00000503291 SMCPP49901 116 aaPredicted RBP11.98□□□□□ -0.49
CDC42SE2-206ENST00000503291 KRTAP10-8P60410 259 aa11.98□□□□□ -0.49
CDC42SE2-206ENST00000503291 A0A1B0GV72 72 aa11.96□□□□□ -0.49
CDC42SE2-206ENST00000503291 Q8NBF4 154 aa11.96□□□□□ -0.49
CDC42SE2-206ENST00000503291 SSBP3-AS1Q7Z2R9 100 aa11.96□□□□□ -0.5
CDC42SE2-206ENST00000503291 KRTAP29-1A8MX34 341 aaPredicted RBP11.95□□□□□ -0.5
CDC42SE2-206ENST00000503291 IGLV8-61A0A075B6I0 122 aa11.94□□□□□ -0.5
CDC42SE2-206ENST00000503291 F8W1H4 67 aa11.93□□□□□ -0.5
CDC42SE2-206ENST00000503291 MT1HL1P0DM35 61 aa11.93□□□□□ -0.5
CDC42SE2-206ENST00000503291 A0A0G2JQZ4 141 aa11.92□□□□□ -0.5
CDC42SE2-206ENST00000503291 RBM3P98179 157 aaKnown RBP11.9□□□□□ -0.5
CDC42SE2-206ENST00000503291 JMJD7-PLA2G4BH0Y9G9 81 aa11.89□□□□□ -0.51
CDC42SE2-206ENST00000503291 Q6JHZ5 121 aa11.89□□□□□ -0.51
CDC42SE2-206ENST00000503291 IGFL1Q6UW32 110 aa11.89□□□□□ -0.51
CDC42SE2-206ENST00000503291 PCLOQ9Y6V0 5065 aa11.88□□□□□ -0.51
CDC42SE2-206ENST00000503291 OBSCN-AS1Q96MR7 158 aa11.87□□□□□ -0.51
CDC42SE2-206ENST00000503291 TNXBP22105 4242 aa11.87□□□□□ -0.51
CDC42SE2-206ENST00000503291 LINC00304Q8N9R0 145 aa11.85□□□□□ -0.51
CDC42SE2-206ENST00000503291 DSCR8Q96T75 97 aa11.85□□□□□ -0.51
CDC42SE2-206ENST00000503291 TRBV7-4A0A0J9YYF1 115 aa11.84□□□□□ -0.51
CDC42SE2-206ENST00000503291 J3QL48 77 aa11.83□□□□□ -0.52
CDC42SE2-206ENST00000503291 C4orf48Q5BLP8 95 aa11.82□□□□□ -0.52
CDC42SE2-206ENST00000503291 HRCT1Q6UXD1 115 aa11.82□□□□□ -0.52
CDC42SE2-206ENST00000503291 C14orf132Q9NPU4 83 aa11.82□□□□□ -0.52
CDC42SE2-206ENST00000503291 ETDBQ3ZM63 59 aa11.81□□□□□ -0.52
CDC42SE2-206ENST00000503291 SPAG11AQ6PDA7 123 aa11.8□□□□□ -0.52
CDC42SE2-206ENST00000503291 TEN1Q86WV5 123 aa11.8□□□□□ -0.52
CDC42SE2-206ENST00000503291 DMBT1Q9UGM3 2413 aaPredicted RBP11.8□□□□□ -0.52
CDC42SE2-206ENST00000503291 CD164Q04900 197 aa11.78□□□□□ -0.52
CDC42SE2-206ENST00000503291 LOC110117498A0A087WWA1 95 aa11.77□□□□□ -0.52
CDC42SE2-206ENST00000503291 A0A1W2PNM2 257 aa11.77□□□□□ -0.52
CDC42SE2-206ENST00000503291 SPINK1P00995 79 aa11.77□□□□□ -0.53
CDC42SE2-206ENST00000503291 CCKP06307 115 aa11.77□□□□□ -0.53
CDC42SE2-206ENST00000503291 Q6ZQT0 140 aa11.76□□□□□ -0.53
CDC42SE2-206ENST00000503291 PDE6GP18545 87 aa11.76□□□□□ -0.53
CDC42SE2-206ENST00000503291 VPS25Q9BRG1 176 aa11.75□□□□□ -0.53
CDC42SE2-206ENST00000503291 Q6Q795 121 aa11.74□□□□□ -0.53
CDC42SE2-206ENST00000503291 TRBV7-7A0A0K0K1E9 115 aa11.72□□□□□ -0.53
CDC42SE2-206ENST00000503291 RPS29P62273 56 aaKnown RBP11.69□□□□□ -0.54
CDC42SE2-206ENST00000503291 A0A087WSZ3 146 aa11.67□□□□□ -0.54
CDC42SE2-206ENST00000503291 LIMD2Q9BT23 127 aa11.65□□□□□ -0.54
CDC42SE2-206ENST00000503291 C21orf62-AS1Q17RA5 79 aa11.65□□□□□ -0.54
CDC42SE2-206ENST00000503291 Q5XG85 94 aa11.64□□□□□ -0.55
CDC42SE2-206ENST00000503291 A0A1B0GW54 56 aa11.61□□□□□ -0.55
CDC42SE2-206ENST00000503291 SS18L2Q9UHA2 77 aa11.59□□□□□ -0.55
CDC42SE2-206ENST00000503291 RETNLBQ9BQ08 111 aa11.57□□□□□ -0.56
CDC42SE2-206ENST00000503291 ASB16-AS1Q495Z4 193 aa11.57□□□□□ -0.56
CDC42SE2-206ENST00000503291 C1orf195Q5TG92 126 aa11.53□□□□□ -0.56
CDC42SE2-206ENST00000503291 HERC1Q15751 4861 aa11.5□□□□□ -0.57
CDC42SE2-206ENST00000503291 LINC00846Q9NV44 126 aa11.5□□□□□ -0.57
CDC42SE2-206ENST00000503291 Q96NJ1 140 aa11.49□□□□□ -0.57
CDC42SE2-206ENST00000503291 NREPQ16612 68 aa11.48□□□□□ -0.57
CDC42SE2-206ENST00000503291 LINC00472Q9H8W2 130 aa11.48□□□□□ -0.57
CDC42SE2-206ENST00000503291 DEFB116Q30KQ4 102 aa11.47□□□□□ -0.57
CDC42SE2-206ENST00000503291 ACYP1P07311 99 aa11.45□□□□□ -0.58
CDC42SE2-206ENST00000503291 PRR4Q16378 134 aa11.45□□□□□ -0.58
CDC42SE2-206ENST00000503291 FAM240AA0A1B0GVK7 77 aa11.44□□□□□ -0.58
CDC42SE2-206ENST00000503291 Q6ZVQ6 151 aa11.44□□□□□ -0.58
CDC42SE2-206ENST00000503291 J3QR89 54 aa11.43□□□□□ -0.58
CDC42SE2-206ENST00000503291 FP248Q71RG6 208 aaPredicted RBP11.43□□□□□ -0.58
CDC42SE2-206ENST00000503291 UBL5Q9BZL1 73 aa11.43□□□□□ -0.58
CDC42SE2-206ENST00000503291 IGKV4-1P06312 121 aa11.41□□□□□ -0.58
CDC42SE2-206ENST00000503291 IGLV7-46A0A075B6I9 117 aa11.4□□□□□ -0.59
CDC42SE2-206ENST00000503291 SIGMAR1Q99720 223 aa11.36□□□□□ -0.59
CDC42SE2-206ENST00000503291 J3KT08 172 aa11.36□□□□□ -0.59
CDC42SE2-206ENST00000503291 K7ERU9 68 aa11.33□□□□□ -0.6
CDC42SE2-206ENST00000503291 BPY2O14599 106 aa11.33□□□□□ -0.6
CDC42SE2-206ENST00000503291 DSCR10P59022 87 aa11.3□□□□□ -0.6
CDC42SE2-206ENST00000503291 A8MWP4 228 aa11.28□□□□□ -0.6
CDC42SE2-206ENST00000503291 NDUFB1O75438 58 aa11.26□□□□□ -0.61
CDC42SE2-206ENST00000503291 IGKV3D-7A0A0C4DH55 119 aa11.26□□□□□ -0.61
CDC42SE2-206ENST00000503291 KRTAP13-3Q3SY46 172 aa11.26□□□□□ -0.61
CDC42SE2-206ENST00000503291 TPRXLQ17RH7 258 aa11.25□□□□□ -0.61
CDC42SE2-206ENST00000503291 IGHV6-1A0A0B4J1U7 121 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms