RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 PPDPFLQ8WWR9 84 aa14.37□□□□□ -0.11
LSM6-202ENST00000502781 SNCGO76070 127 aa14.36□□□□□ -0.11
LSM6-202ENST00000502781 PSMB2P49721 201 aa14.34□□□□□ -0.11
LSM6-202ENST00000502781 OCIAD2Q56VL3 154 aa14.34□□□□□ -0.11
LSM6-202ENST00000502781 PRR4Q16378 134 aa14.33□□□□□ -0.12
LSM6-202ENST00000502781 RETNLBQ9BQ08 111 aa14.33□□□□□ -0.12
LSM6-202ENST00000502781 COX6CP09669 75 aa14.32□□□□□ -0.12
LSM6-202ENST00000502781 CLEC2BQ92478 149 aa14.32□□□□□ -0.12
LSM6-202ENST00000502781 LRP2P98164 4655 aa14.31□□□□□ -0.12
LSM6-202ENST00000502781 IGLV8-61A0A075B6I0 122 aa14.29□□□□□ -0.12
LSM6-202ENST00000502781 CD164Q04900 197 aa14.28□□□□□ -0.12
LSM6-202ENST00000502781 UBR4Q5T4S7 5183 aa14.27□□□□□ -0.12
LSM6-202ENST00000502781 F8WEM9 126 aa14.27□□□□□ -0.12
LSM6-202ENST00000502781 SNHG12Q9BXW3 62 aa14.24□□□□□ -0.13
LSM6-202ENST00000502781 A0A0G2JQZ4 141 aa14.23□□□□□ -0.13
LSM6-202ENST00000502781 LPAP08519 4548 aa14.22□□□□□ -0.13
LSM6-202ENST00000502781 GHRHP01286 108 aa14.22□□□□□ -0.13
LSM6-202ENST00000502781 Q6JHZ5 121 aa14.22□□□□□ -0.13
LSM6-202ENST00000502781 HRCT1Q6UXD1 115 aa14.22□□□□□ -0.13
LSM6-202ENST00000502781 SCGB1C2P0DMR2 95 aa14.2□□□□□ -0.14
LSM6-202ENST00000502781 FP248Q71RG6 208 aaPredicted RBP14.2□□□□□ -0.14
LSM6-202ENST00000502781 LST1O00453 97 aa14.19□□□□□ -0.14
LSM6-202ENST00000502781 DNAL4O96015 105 aa14.19□□□□□ -0.14
LSM6-202ENST00000502781 TRACP01848 142 aa14.18□□□□□ -0.14
LSM6-202ENST00000502781 IGLV7-46A0A075B6I9 117 aa14.17□□□□□ -0.14
LSM6-202ENST00000502781 NDUFV3P56181 108 aaKnown RBP14.17□□□□□ -0.14
LSM6-202ENST00000502781 Q5XG85 94 aa14.17□□□□□ -0.14
LSM6-202ENST00000502781 IGFL1Q6UW32 110 aa14.17□□□□□ -0.14
LSM6-202ENST00000502781 LIMD2Q9BT23 127 aa14.17□□□□□ -0.14
LSM6-202ENST00000502781 ORMDL1Q9P0S3 153 aa14.16□□□□□ -0.14
LSM6-202ENST00000502781 BATFQ16520 125 aa14.15□□□□□ -0.14
LSM6-202ENST00000502781 H3BQ85 93 aa14.14□□□□□ -0.15
LSM6-202ENST00000502781 NAA38Q9BRA0 125 aaKnown RBP14.14□□□□□ -0.15
LSM6-202ENST00000502781 H3BUT2 72 aa14.13□□□□□ -0.15
LSM6-202ENST00000502781 FABP2P12104 132 aa14.13□□□□□ -0.15
LSM6-202ENST00000502781 TPRXLQ17RH7 258 aa14.12□□□□□ -0.15
LSM6-202ENST00000502781 TMEM256-PLSCR3K7ERE1 68 aa14.09□□□□□ -0.15
LSM6-202ENST00000502781 H3BMG7 143 aa14.08□□□□□ -0.16
LSM6-202ENST00000502781 TCL1BO95988 128 aa14.07□□□□□ -0.16
LSM6-202ENST00000502781 TRBV7-7A0A0K0K1E9 115 aa14.05□□□□□ -0.16
LSM6-202ENST00000502781 TAX1BP3O14907 124 aa14.03□□□□□ -0.16
LSM6-202ENST00000502781 UBE2V1Q13404 147 aa14.03□□□□□ -0.16
LSM6-202ENST00000502781 ATXN8Q156A1 80 aa14.03□□□□□ -0.16
LSM6-202ENST00000502781 Q6Q795 121 aa14.03□□□□□ -0.16
LSM6-202ENST00000502781 KRTAP13-3Q3SY46 172 aa14.02□□□□□ -0.17
LSM6-202ENST00000502781 LYRM7Q5U5X0 104 aa14.01□□□□□ -0.17
LSM6-202ENST00000502781 C9orf118A6NHY6 69 aa14□□□□□ -0.17
LSM6-202ENST00000502781 C1orf195Q5TG92 126 aa13.99□□□□□ -0.17
LSM6-202ENST00000502781 TEN1Q86WV5 123 aa13.98□□□□□ -0.17
LSM6-202ENST00000502781 TRBV20-1A0A075B6N2 111 aa13.97□□□□□ -0.17
LSM6-202ENST00000502781 ASB16-AS1Q495Z4 193 aa13.97□□□□□ -0.17
LSM6-202ENST00000502781 BAALC-AS2P0C853 105 aa13.96□□□□□ -0.17
LSM6-202ENST00000502781 CDIP1Q9H305 208 aa13.96□□□□□ -0.18
LSM6-202ENST00000502781 A0A1W2PNM2 257 aa13.93□□□□□ -0.18
LSM6-202ENST00000502781 ANKRD29Q8N6D5 301 aa13.93□□□□□ -0.18
LSM6-202ENST00000502781 A0A1W2PPM0 123 aa13.92□□□□□ -0.18
LSM6-202ENST00000502781 A0A1B0GV72 72 aa13.9□□□□□ -0.18
LSM6-202ENST00000502781 LCE2DQ5TA82 110 aaPredicted RBP13.9□□□□□ -0.18
LSM6-202ENST00000502781 RNF213Q63HN8 5207 aa13.88□□□□□ -0.19
LSM6-202ENST00000502781 TRBV7-4A0A0J9YYF1 115 aa13.88□□□□□ -0.19
LSM6-202ENST00000502781 COL5A1-AS1Q5SY13 56 aa13.87□□□□□ -0.19
LSM6-202ENST00000502781 RBM3P98179 157 aaKnown RBP13.86□□□□□ -0.19
LSM6-202ENST00000502781 SS18L2Q9UHA2 77 aa13.86□□□□□ -0.19
LSM6-202ENST00000502781 A0A087WSZ3 146 aa13.85□□□□□ -0.19
LSM6-202ENST00000502781 C9JAW5 83 aa13.83□□□□□ -0.19
LSM6-202ENST00000502781 PCP4L1A6NKN8 68 aa13.83□□□□□ -0.2
LSM6-202ENST00000502781 CCKP06307 115 aa13.81□□□□□ -0.2
LSM6-202ENST00000502781 DSCR8Q96T75 97 aa13.8□□□□□ -0.2
LSM6-202ENST00000502781 JMJD7-PLA2G4BH0Y9G9 81 aa13.78□□□□□ -0.2
LSM6-202ENST00000502781 MUC17Q685J3 4493 aa13.78□□□□□ -0.2
LSM6-202ENST00000502781 XP32Q5T750 250 aa13.77□□□□□ -0.21
LSM6-202ENST00000502781 Q96NJ1 140 aa13.75□□□□□ -0.21
LSM6-202ENST00000502781 H3BT86 120 aa13.74□□□□□ -0.21
LSM6-202ENST00000502781 OBSCN-AS1Q96MR7 158 aa13.74□□□□□ -0.21
LSM6-202ENST00000502781 SPCS1Q9Y6A9 102 aa13.74□□□□□ -0.21
LSM6-202ENST00000502781 C9orf92A6NGG3 77 aa13.73□□□□□ -0.21
LSM6-202ENST00000502781 LOC110117498A0A087WWA1 95 aa13.71□□□□□ -0.22
LSM6-202ENST00000502781 Q6ZQT0 140 aa13.7□□□□□ -0.22
LSM6-202ENST00000502781 VPS25Q9BRG1 176 aa13.69□□□□□ -0.22
LSM6-202ENST00000502781 MTURNQ8N3F0 131 aa13.68□□□□□ -0.22
LSM6-202ENST00000502781 MUC2Q02817 5179 aa13.67□□□□□ -0.22
LSM6-202ENST00000502781 PDE6GP18545 87 aa13.67□□□□□ -0.22
LSM6-202ENST00000502781 C14orf132Q9NPU4 83 aa13.65□□□□□ -0.22
LSM6-202ENST00000502781 K7EP34 96 aa13.63□□□□□ -0.23
LSM6-202ENST00000502781 C21orf62-AS1Q17RA5 79 aa13.63□□□□□ -0.23
LSM6-202ENST00000502781 LINC00472Q9H8W2 130 aa13.63□□□□□ -0.23
LSM6-202ENST00000502781 A0A1B0GW54 56 aa13.61□□□□□ -0.23
LSM6-202ENST00000502781 SEC61BP60468 96 aaKnown RBP13.61□□□□□ -0.23
LSM6-202ENST00000502781 SMCPP49901 116 aaPredicted RBP13.59□□□□□ -0.23
LSM6-202ENST00000502781 PRO0461Q9UI25 63 aa13.58□□□□□ -0.24
LSM6-202ENST00000502781 IGKV4-1P06312 121 aa13.55□□□□□ -0.24
LSM6-202ENST00000502781 SIGMAR1Q99720 223 aa13.54□□□□□ -0.24
LSM6-202ENST00000502781 DEFB116Q30KQ4 102 aa13.52□□□□□ -0.25
LSM6-202ENST00000502781 RPL37P61927 97 aaKnown RBP13.51□□□□□ -0.25
LSM6-202ENST00000502781 GTF2H5Q6ZYL4 71 aa13.5□□□□□ -0.25
LSM6-202ENST00000502781 KRTAP4-1Q9BYQ7 146 aa13.47□□□□□ -0.25
LSM6-202ENST00000502781 PCOTHQ58A44 107 aa13.45□□□□□ -0.26
LSM6-202ENST00000502781 J3KT08 172 aa13.44□□□□□ -0.26
LSM6-202ENST00000502781 Q75L30 129 aa13.43□□□□□ -0.26
LSM6-202ENST00000502781 DSCR10P59022 87 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms