RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 HMGN3Q15651 99 aa-0.65□□□□□ -2.51
CD46-218ENST00000496723 ETDBQ3ZM63 59 aa-0.65□□□□□ -2.51
CD46-218ENST00000496723 ZNF720Q7Z2F6 126 aa-0.65□□□□□ -2.51
CD46-218ENST00000496723 DDX60LQ5H9U9 1706 aaKnown RBP-0.65□□□□□ -2.51
CD46-218ENST00000496723 ADGRG4Q8IZF6 3080 aa-0.65□□□□□ -2.51
CD46-218ENST00000496723 MYO3AQ8NEV4 1616 aa-0.65□□□□□ -2.51
CD46-218ENST00000496723 CELSR3Q9NYQ7 3312 aa-0.66□□□□□ -2.52
CD46-218ENST00000496723 D6R8Y8 96 aa-0.66□□□□□ -2.52
CD46-218ENST00000496723 LINC00032P0C843 101 aa-0.66□□□□□ -2.52
CD46-218ENST00000496723 COX7BP24311 80 aa-0.66□□□□□ -2.52
CD46-218ENST00000496723 ALKAL2Q6UX46 152 aa-0.66□□□□□ -2.52
CD46-218ENST00000496723 MUSTN1Q8IVN3 82 aa-0.66□□□□□ -2.52
CD46-218ENST00000496723 MAP3K1Q13233 1512 aa-0.66□□□□□ -2.52
CD46-218ENST00000496723 ARFGEF2Q9Y6D5 1785 aa-0.66□□□□□ -2.52
CD46-218ENST00000496723 PLXNC1O60486 1568 aa-0.66□□□□□ -2.52
CD46-218ENST00000496723 TEX14Q8IWB6 1497 aa-0.67□□□□□ -2.52
CD46-218ENST00000496723 WIZO95785 1651 aa-0.67□□□□□ -2.52
CD46-218ENST00000496723 UQCRHLA0A096LP55 91 aa-0.67□□□□□ -2.52
CD46-218ENST00000496723 LEPROTL1O95214 131 aa-0.67□□□□□ -2.52
CD46-218ENST00000496723 COL5A1-AS1Q5SY13 56 aa-0.67□□□□□ -2.52
CD46-218ENST00000496723 UBE2D4Q9Y2X8 147 aa-0.67□□□□□ -2.52
CD46-218ENST00000496723 NWD1Q149M9 1564 aa-0.67□□□□□ -2.52
CD46-218ENST00000496723 TJP1Q07157 1748 aa-0.67□□□□□ -2.52
CD46-218ENST00000496723 CFAP46Q8IYW2 2715 aa-0.67□□□□□ -2.52
CD46-218ENST00000496723 CSMD1Q96PZ7 3565 aa-0.67□□□□□ -2.52
CD46-218ENST00000496723 COL6A5A8TX70 2615 aa-0.68□□□□□ -2.52
CD46-218ENST00000496723 PLCH1Q4KWH8 1693 aa-0.68□□□□□ -2.52
CD46-218ENST00000496723 DNAH17Q9UFH2 4485 aa-0.68□□□□□ -2.52
CD46-218ENST00000496723 C9orf92A6NGG3 77 aa-0.68□□□□□ -2.52
CD46-218ENST00000496723 NMSQ5H8A3 153 aa-0.68□□□□□ -2.52
CD46-218ENST00000496723 C14orf144Q96I85 54 aa-0.68□□□□□ -2.52
CD46-218ENST00000496723 CNTLNQ9NXG0 1405 aa-0.68□□□□□ -2.52
CD46-218ENST00000496723 ANKRD50Q9ULJ7 1429 aa-0.68□□□□□ -2.52
CD46-218ENST00000496723 LRRC9Q6ZRR7 1453 aa-0.68□□□□□ -2.52
CD46-218ENST00000496723 EPRSP07814 1512 aaKnown RBP-0.69□□□□□ -2.52
CD46-218ENST00000496723 SMG1Q96Q15 3661 aaKnown RBP-0.69□□□□□ -2.52
CD46-218ENST00000496723 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.69□□□□□ -2.52
CD46-218ENST00000496723 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.69□□□□□ -2.52
CD46-218ENST00000496723 FAUP35544 74 aaKnown RBP-0.69□□□□□ -2.52
CD46-218ENST00000496723 S4R3F8 94 aa-0.69□□□□□ -2.52
CD46-218ENST00000496723 NEXMIFQ5QGS0 1516 aa-0.69□□□□□ -2.52
CD46-218ENST00000496723 PPLO60437 1756 aa-0.7□□□□□ -2.52
CD46-218ENST00000496723 MGAQ8IWI9 3026 aa-0.7□□□□□ -2.52
CD46-218ENST00000496723 ATP6V1G2-DDX39BF2Z307 99 aa-0.7□□□□□ -2.52
CD46-218ENST00000496723 H0YAA0 97 aa-0.7□□□□□ -2.52
CD46-218ENST00000496723 KRTAP19-5Q3LI72 72 aa-0.7□□□□□ -2.52
CD46-218ENST00000496723 COX6B2Q6YFQ2 88 aa-0.7□□□□□ -2.52
CD46-218ENST00000496723 GAFA1Q96PS6 74 aa-0.7□□□□□ -2.52
CD46-218ENST00000496723 DPY30Q9C005 99 aa-0.7□□□□□ -2.52
CD46-218ENST00000496723 FANCAO15360 1455 aa-0.7□□□□□ -2.52
CD46-218ENST00000496723 ATP7BP35670 1465 aa-0.7□□□□□ -2.52
CD46-218ENST00000496723 ITSN1Q15811 1721 aa-0.7□□□□□ -2.52
CD46-218ENST00000496723 EYSQ5T1H1 3165 aa-0.71□□□□□ -2.52
CD46-218ENST00000496723 IQCF6A8MYZ5 107 aa-0.71□□□□□ -2.52
CD46-218ENST00000496723 RBP2P50120 134 aa-0.71□□□□□ -2.52
CD46-218ENST00000496723 LINC00158P58513 81 aa-0.71□□□□□ -2.52
CD46-218ENST00000496723 MT1HP80294 61 aa-0.71□□□□□ -2.52
CD46-218ENST00000496723 NCMAPQ5T1S8 102 aa-0.71□□□□□ -2.52
CD46-218ENST00000496723 RICTORQ6R327 1708 aa-0.72□□□□□ -2.52
CD46-218ENST00000496723 PARP4Q9UKK3 1724 aaKnown RBP-0.72□□□□□ -2.52
CD46-218ENST00000496723 ATP10BO94823 1461 aa-0.72□□□□□ -2.52
CD46-218ENST00000496723 TRAV21A0A0B4J279 112 aa-0.72□□□□□ -2.52
CD46-218ENST00000496723 PRLHP81277 87 aa-0.72□□□□□ -2.52
CD46-218ENST00000496723 DEFA5Q01523 94 aa-0.72□□□□□ -2.52
CD46-218ENST00000496723 ACBD7Q8N6N7 88 aa-0.72□□□□□ -2.52
CD46-218ENST00000496723 C20orf78Q9BR46 151 aa-0.72□□□□□ -2.52
CD46-218ENST00000496723 PRO3102Q9H379 93 aa-0.72□□□□□ -2.52
CD46-218ENST00000496723 DEPDC5O75140 1603 aa-0.72□□□□□ -2.52
CD46-218ENST00000496723 ABCC10Q5T3U5 1492 aa-0.73□□□□□ -2.53
CD46-218ENST00000496723 PIK3C2BO00750 1634 aa-0.73□□□□□ -2.53
CD46-218ENST00000496723 A0A1B0GUT8 65 aa-0.73□□□□□ -2.53
CD46-218ENST00000496723 HMGN2P05204 90 aaKnown RBP-0.73□□□□□ -2.53
CD46-218ENST00000496723 DEFB110Q30KQ9 67 aa-0.73□□□□□ -2.53
CD46-218ENST00000496723 DNAH5Q8TE73 4624 aa-0.73□□□□□ -2.53
CD46-218ENST00000496723 CFAP43Q8NDM7 1665 aa-0.73□□□□□ -2.53
CD46-218ENST00000496723 DIP2BQ9P265 1576 aa-0.74□□□□□ -2.53
CD46-218ENST00000496723 ZC3H13Q5T200 1668 aaKnown RBP-0.74□□□□□ -2.53
CD46-218ENST00000496723 DEFB130BP0DP73 79 aa-0.74□□□□□ -2.53
CD46-218ENST00000496723 DEFB130AP0DP74 79 aa-0.74□□□□□ -2.53
CD46-218ENST00000496723 WFDC9Q8NEX5 89 aa-0.74□□□□□ -2.53
CD46-218ENST00000496723 NCOA2Q15596 1464 aa-0.74□□□□□ -2.53
CD46-218ENST00000496723 DNAH10Q8IVF4 4471 aa-0.74□□□□□ -2.53
CD46-218ENST00000496723 ITSN2Q9NZM3 1697 aa-0.75□□□□□ -2.53
CD46-218ENST00000496723 C3orf79P0CE67 100 aa-0.75□□□□□ -2.53
CD46-218ENST00000496723 RPL38P63173 70 aaKnown RBP-0.75□□□□□ -2.53
CD46-218ENST00000496723 PLGLAQ15195 96 aa-0.75□□□□□ -2.53
CD46-218ENST00000496723 CEP162Q5TB80 1403 aa-0.75□□□□□ -2.53
CD46-218ENST00000496723 TOGARAM1Q9Y4F4 1720 aa-0.75□□□□□ -2.53
CD46-218ENST00000496723 LYNX1G3V0Z9 82 aa-0.76□□□□□ -2.53
CD46-218ENST00000496723 IAPPP10997 89 aa-0.76□□□□□ -2.53
CD46-218ENST00000496723 DEFB1P60022 68 aa-0.76□□□□□ -2.53
CD46-218ENST00000496723 DEFB106AQ8N104 65 aa-0.76□□□□□ -2.53
CD46-218ENST00000496723 SNHG12Q9BXW3 62 aa-0.76□□□□□ -2.53
CD46-218ENST00000496723 MAGI3Q5TCQ9 1506 aa-0.76□□□□□ -2.53
CD46-218ENST00000496723 LY75O60449 1722 aa-0.77□□□□□ -2.53
CD46-218ENST00000496723 KIF14Q15058 1648 aa-0.77□□□□□ -2.53
CD46-218ENST00000496723 LCE6AA0A183 80 aa-0.77□□□□□ -2.53
CD46-218ENST00000496723 MYMXA0A1B0GTQ4 84 aa-0.77□□□□□ -2.53
CD46-218ENST00000496723 ACYP1P07311 99 aa-0.77□□□□□ -2.53
CD46-218ENST00000496723 SMIM11AP58511 58 aa-0.77□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms