RNA–Protein interactions for RNA: ENST00000496076.1

CLTC-208, Transcript of clathrin heavy chain, humanhuman

TSL 2

Gene CLTC, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-208ENST00000496076 CFAP74Q9C0B2 1584 aa-0.35□□□□□ -2.47
CLTC-208ENST00000496076 PDZD2O15018 2839 aa-0.35□□□□□ -2.47
CLTC-208ENST00000496076 HMGA1P17096 107 aaKnown RBP-0.36□□□□□ -2.47
CLTC-208ENST00000496076 SVEP1Q4LDE5 3571 aa-0.36□□□□□ -2.47
CLTC-208ENST00000496076 WIZO95785 1651 aa-0.37□□□□□ -2.47
CLTC-208ENST00000496076 RRBP1Q9P2E9 1410 aaKnown RBP-0.37□□□□□ -2.47
CLTC-208ENST00000496076 PKHD1P08F94 4074 aa-0.37□□□□□ -2.47
CLTC-208ENST00000496076 NBASA2RRP1 2371 aa-0.38□□□□□ -2.47
CLTC-208ENST00000496076 H3BVH4 76 aa-0.38□□□□□ -2.47
CLTC-208ENST00000496076 DEPDC5O75140 1603 aa-0.38□□□□□ -2.47
CLTC-208ENST00000496076 SPTBN4Q9H254 2564 aa-0.39□□□□□ -2.47
CLTC-208ENST00000496076 EPG5Q9HCE0 2579 aa-0.39□□□□□ -2.47
CLTC-208ENST00000496076 MAP3K1Q13233 1512 aa-0.39□□□□□ -2.47
CLTC-208ENST00000496076 TNRC18O15417 2968 aaPredicted RBP-0.39□□□□□ -2.47
CLTC-208ENST00000496076 HECTD1Q9ULT8 2610 aa-0.4□□□□□ -2.47
CLTC-208ENST00000496076 H3BNG1 76 aa-0.4□□□□□ -2.47
CLTC-208ENST00000496076 IAPPP10997 89 aa-0.4□□□□□ -2.47
CLTC-208ENST00000496076 ANKARQ7Z5J8 1434 aa-0.4□□□□□ -2.47
CLTC-208ENST00000496076 PRRC2CQ9Y520 2896 aaKnown RBP-0.4□□□□□ -2.47
CLTC-208ENST00000496076 DEFB130BP0DP73 79 aa-0.41□□□□□ -2.48
CLTC-208ENST00000496076 DEFB130AP0DP74 79 aa-0.41□□□□□ -2.48
CLTC-208ENST00000496076 USP9YO00507 2555 aaPredicted RBP-0.41□□□□□ -2.48
CLTC-208ENST00000496076 FLGP20930 4061 aaPredicted RBP-0.41□□□□□ -2.48
CLTC-208ENST00000496076 DEFB131BA0A096LNP1 70 aa-0.42□□□□□ -2.48
CLTC-208ENST00000496076 LYNX1G3V0Z9 82 aa-0.42□□□□□ -2.48
CLTC-208ENST00000496076 HFM1A2PYH4 1435 aa-0.42□□□□□ -2.48
CLTC-208ENST00000496076 ANKRD50Q9ULJ7 1429 aa-0.42□□□□□ -2.48
CLTC-208ENST00000496076 CD163L1Q9NR16 1453 aa-0.42□□□□□ -2.48
CLTC-208ENST00000496076 LMTK2Q8IWU2 1503 aa-0.43□□□□□ -2.48
CLTC-208ENST00000496076 ABCA8O94911 1581 aa-0.43□□□□□ -2.48
CLTC-208ENST00000496076 MRPL33O75394 65 aaKnown RBP-0.43□□□□□ -2.48
CLTC-208ENST00000496076 SPRR2EP22531 72 aa-0.43□□□□□ -2.48
CLTC-208ENST00000496076 ENHOQ6UWT2 76 aa-0.43□□□□□ -2.48
CLTC-208ENST00000496076 UBL5Q9BZL1 73 aa-0.43□□□□□ -2.48
CLTC-208ENST00000496076 HERC1Q15751 4861 aa-0.43□□□□□ -2.48
CLTC-208ENST00000496076 HIVEP1P15822 2718 aa-0.44□□□□□ -2.48
CLTC-208ENST00000496076 FASNP49327 2511 aaKnown RBP-0.44□□□□□ -2.48
CLTC-208ENST00000496076 RALGAPBQ86X10 1494 aa-0.44□□□□□ -2.48
CLTC-208ENST00000496076 MXRA5Q9NR99 2828 aa-0.44□□□□□ -2.48
CLTC-208ENST00000496076 ITPR3Q14573 2671 aa-0.44□□□□□ -2.48
CLTC-208ENST00000496076 KMT2CQ8NEZ4 4911 aaKnown RBP-0.45□□□□□ -2.48
CLTC-208ENST00000496076 ITSN1Q15811 1721 aa-0.45□□□□□ -2.48
CLTC-208ENST00000496076 PKD1P98161 4303 aa-0.45□□□□□ -2.48
CLTC-208ENST00000496076 FAT1Q14517 4588 aa-0.46□□□□□ -2.48
CLTC-208ENST00000496076 TJP1Q07157 1748 aa-0.46□□□□□ -2.48
CLTC-208ENST00000496076 TGP01266 2768 aa-0.46□□□□□ -2.48
CLTC-208ENST00000496076 KRTAP19-8Q3LI54 63 aa-0.46□□□□□ -2.48
CLTC-208ENST00000496076 KCNQ1DNQ9H478 68 aa-0.46□□□□□ -2.48
CLTC-208ENST00000496076 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.46□□□□□ -2.48
CLTC-208ENST00000496076 SONP18583 2426 aaKnown RBP-0.47□□□□□ -2.48
CLTC-208ENST00000496076 HERC2O95714 4834 aa-0.48□□□□□ -2.49
CLTC-208ENST00000496076 LAMA5O15230 3695 aa-0.48□□□□□ -2.49
CLTC-208ENST00000496076 DSPP15924 2871 aaKnown RBP-0.48□□□□□ -2.49
CLTC-208ENST00000496076 NEBP20929 6669 aa-0.48□□□□□ -2.49
CLTC-208ENST00000496076 CRIP1P50238 77 aa-0.48□□□□□ -2.49
CLTC-208ENST00000496076 PRLHP81277 87 aa-0.48□□□□□ -2.49
CLTC-208ENST00000496076 SPG11Q96JI7 2443 aa-0.48□□□□□ -2.49
CLTC-208ENST00000496076 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.48□□□□□ -2.49
CLTC-208ENST00000496076 MYO18BQ8IUG5 2567 aa-0.49□□□□□ -2.49
CLTC-208ENST00000496076 KRTAP20-2Q3LI61 65 aa-0.49□□□□□ -2.49
CLTC-208ENST00000496076 DEFB106AQ8N104 65 aa-0.49□□□□□ -2.49
CLTC-208ENST00000496076 HILPDAQ9Y5L2 63 aa-0.49□□□□□ -2.49
CLTC-208ENST00000496076 MYO5CQ9NQX4 1742 aa-0.5□□□□□ -2.49
CLTC-208ENST00000496076 LYSTQ99698 3801 aa-0.5□□□□□ -2.49
CLTC-208ENST00000496076 C9orf92A6NGG3 77 aa-0.51□□□□□ -2.49
CLTC-208ENST00000496076 IQGAP3Q86VI3 1631 aa-0.51□□□□□ -2.49
CLTC-208ENST00000496076 THOC2Q8NI27 1593 aaKnown RBP-0.51□□□□□ -2.49
CLTC-208ENST00000496076 PCLOQ9Y6V0 5065 aa-0.52□□□□□ -2.49
CLTC-208ENST00000496076 NRAPQ86VF7 1730 aa-0.52□□□□□ -2.49
CLTC-208ENST00000496076 LRRIQ1Q96JM4 1722 aa-0.52□□□□□ -2.49
CLTC-208ENST00000496076 SCRIBQ14160 1630 aa-0.52□□□□□ -2.49
CLTC-208ENST00000496076 DIP2AQ14689 1571 aa-0.52□□□□□ -2.49
CLTC-208ENST00000496076 ATXN8Q156A1 80 aa-0.52□□□□□ -2.49
CLTC-208ENST00000496076 ZC3H13Q5T200 1668 aaKnown RBP-0.53□□□□□ -2.49
CLTC-208ENST00000496076 RNF17Q9BXT8 1623 aaKnown RBP-0.53□□□□□ -2.49
CLTC-208ENST00000496076 KIAA0586Q9BVV6 1533 aa-0.53□□□□□ -2.49
CLTC-208ENST00000496076 ETDCA0A1B0GVM5 59 aa-0.53□□□□□ -2.49
CLTC-208ENST00000496076 MT4P47944 62 aa-0.53□□□□□ -2.49
CLTC-208ENST00000496076 DNAH9Q9NYC9 4486 aa-0.53□□□□□ -2.49
CLTC-208ENST00000496076 TEP1Q99973 2627 aaKnown RBP-0.53□□□□□ -2.49
CLTC-208ENST00000496076 UGGT2Q9NYU1 1516 aa-0.54□□□□□ -2.5
CLTC-208ENST00000496076 PARP4Q9UKK3 1724 aaKnown RBP-0.54□□□□□ -2.5
CLTC-208ENST00000496076 USP9XQ93008 2570 aaPredicted RBP-0.54□□□□□ -2.5
CLTC-208ENST00000496076 SMCO4Q9NRQ5 59 aa-0.54□□□□□ -2.5
CLTC-208ENST00000496076 GNG13Q9P2W3 67 aa-0.54□□□□□ -2.5
CLTC-208ENST00000496076 CDC42BPGQ6DT37 1551 aa-0.54□□□□□ -2.5
CLTC-208ENST00000496076 FAT3Q8TDW7 4589 aa-0.55□□□□□ -2.5
CLTC-208ENST00000496076 S4R3F8 94 aa-0.55□□□□□ -2.5
CLTC-208ENST00000496076 RIF1Q5UIP0 2472 aaKnown RBP-0.56□□□□□ -2.5
CLTC-208ENST00000496076 NBPF19A0A087WUL8 3843 aa-0.56□□□□□ -2.5
CLTC-208ENST00000496076 DMXL1Q9Y485 3027 aa-0.56□□□□□ -2.5
CLTC-208ENST00000496076 CUBNO60494 3623 aa-0.56□□□□□ -2.5
CLTC-208ENST00000496076 ZZEF1O43149 2961 aa-0.57□□□□□ -2.5
CLTC-208ENST00000496076 MINOS1Q5TGZ0 78 aa-0.57□□□□□ -2.5
CLTC-208ENST00000496076 SPRR2FQ96RM1 72 aa-0.57□□□□□ -2.5
CLTC-208ENST00000496076 ACACAQ13085 2346 aa-0.57□□□□□ -2.5
CLTC-208ENST00000496076 RYR3Q15413 4870 aa-0.57□□□□□ -2.5
CLTC-208ENST00000496076 DUOX2Q9NRD8 1548 aa-0.58□□□□□ -2.5
CLTC-208ENST00000496076 HTTP42858 3142 aa-0.58□□□□□ -2.5
CLTC-208ENST00000496076 HYDINQ4G0P3 5121 aa-0.58□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms