RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 CREBBPQ92793 2442 aa-0.55□□□□□ -2.5
CLK1-213ENST00000492793 NBPF19A0A087WUL8 3843 aa-0.55□□□□□ -2.5
CLK1-213ENST00000492793 MAP3K4Q9Y6R4 1608 aa-0.56□□□□□ -2.5
CLK1-213ENST00000492793 IFI27P40305 119 aaPredicted RBP-0.56□□□□□ -2.5
CLK1-213ENST00000492793 TEP1Q99973 2627 aaKnown RBP-0.56□□□□□ -2.5
CLK1-213ENST00000492793 CUBNO60494 3623 aa-0.57□□□□□ -2.5
CLK1-213ENST00000492793 ST20Q9HBF5 79 aa-0.57□□□□□ -2.5
CLK1-213ENST00000492793 NESP48681 1621 aa-0.57□□□□□ -2.5
CLK1-213ENST00000492793 MXRA5Q9NR99 2828 aa-0.57□□□□□ -2.5
CLK1-213ENST00000492793 DNAH6Q9C0G6 4158 aa-0.57□□□□□ -2.5
CLK1-213ENST00000492793 LCE6AA0A183 80 aa-0.58□□□□□ -2.5
CLK1-213ENST00000492793 LAMA2P24043 3122 aaKnown RBP-0.59□□□□□ -2.5
CLK1-213ENST00000492793 SCN11AQ9UI33 1791 aa-0.59□□□□□ -2.5
CLK1-213ENST00000492793 H0YAA0 97 aa-0.59□□□□□ -2.5
CLK1-213ENST00000492793 H3BNG1 76 aa-0.59□□□□□ -2.5
CLK1-213ENST00000492793 DEFA5Q01523 94 aa-0.59□□□□□ -2.5
CLK1-213ENST00000492793 DEFB121Q5J5C9 76 aa-0.59□□□□□ -2.5
CLK1-213ENST00000492793 MAGI3Q5TCQ9 1506 aa-0.59□□□□□ -2.5
CLK1-213ENST00000492793 WIZO95785 1651 aa-0.59□□□□□ -2.5
CLK1-213ENST00000492793 ARFGEF2Q9Y6D5 1785 aa-0.6□□□□□ -2.5
CLK1-213ENST00000492793 PIK3C2BO00750 1634 aa-0.6□□□□□ -2.5
CLK1-213ENST00000492793 AKAP9Q99996 3911 aa-0.6□□□□□ -2.51
CLK1-213ENST00000492793 PLXNC1O60486 1568 aa-0.6□□□□□ -2.51
CLK1-213ENST00000492793 DIP2BQ9P265 1576 aa-0.6□□□□□ -2.51
CLK1-213ENST00000492793 EPG5Q9HCE0 2579 aa-0.6□□□□□ -2.51
CLK1-213ENST00000492793 NDUFA4O00483 81 aa-0.6□□□□□ -2.51
CLK1-213ENST00000492793 MT1AP04731 61 aa-0.6□□□□□ -2.51
CLK1-213ENST00000492793 ADIRFQ15847 76 aa-0.6□□□□□ -2.51
CLK1-213ENST00000492793 NREPQ16612 68 aa-0.6□□□□□ -2.51
CLK1-213ENST00000492793 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.6□□□□□ -2.51
CLK1-213ENST00000492793 DSPP15924 2871 aaKnown RBP-0.6□□□□□ -2.51
CLK1-213ENST00000492793 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.61□□□□□ -2.51
CLK1-213ENST00000492793 ATP5EP2Q5VTU8 51 aa-0.61□□□□□ -2.51
CLK1-213ENST00000492793 SPRR2FQ96RM1 72 aa-0.61□□□□□ -2.51
CLK1-213ENST00000492793 MED14O60244 1454 aa-0.61□□□□□ -2.51
CLK1-213ENST00000492793 VPS13DQ5THJ4 4388 aa-0.62□□□□□ -2.51
CLK1-213ENST00000492793 A0A087WXM4 84 aa-0.62□□□□□ -2.51
CLK1-213ENST00000492793 H3BUT2 72 aa-0.62□□□□□ -2.51
CLK1-213ENST00000492793 SMIM13P0DJ93 91 aa-0.62□□□□□ -2.51
CLK1-213ENST00000492793 S100A13Q99584 98 aa-0.62□□□□□ -2.51
CLK1-213ENST00000492793 SMARCA2P51531 1590 aa-0.62□□□□□ -2.51
CLK1-213ENST00000492793 DNHD1Q96M86 4753 aa-0.63□□□□□ -2.51
CLK1-213ENST00000492793 LYNX1G3V0Z9 82 aa-0.63□□□□□ -2.51
CLK1-213ENST00000492793 VPS13BQ7Z7G8 4022 aa-0.63□□□□□ -2.51
CLK1-213ENST00000492793 CCDC88BA6NC98 1476 aa-0.63□□□□□ -2.51
CLK1-213ENST00000492793 FASNP49327 2511 aaKnown RBP-0.64□□□□□ -2.51
CLK1-213ENST00000492793 C9orf92A6NGG3 77 aa-0.64□□□□□ -2.51
CLK1-213ENST00000492793 DEFB130BP0DP73 79 aa-0.64□□□□□ -2.51
CLK1-213ENST00000492793 DEFB130AP0DP74 79 aa-0.64□□□□□ -2.51
CLK1-213ENST00000492793 TACC2O95359 2948 aa-0.64□□□□□ -2.51
CLK1-213ENST00000492793 APOBP04114 4563 aaKnown RBP-0.64□□□□□ -2.51
CLK1-213ENST00000492793 DEPDC5O75140 1603 aa-0.64□□□□□ -2.51
CLK1-213ENST00000492793 DNAH3Q8TD57 4116 aa-0.65□□□□□ -2.51
CLK1-213ENST00000492793 PKHD1L1Q86WI1 4243 aa-0.65□□□□□ -2.51
CLK1-213ENST00000492793 HMGA1P17096 107 aaKnown RBP-0.65□□□□□ -2.51
CLK1-213ENST00000492793 BVES-AS1Q5T3Y7 98 aa-0.65□□□□□ -2.51
CLK1-213ENST00000492793 ANK3Q12955 4377 aaKnown RBP-0.65□□□□□ -2.51
CLK1-213ENST00000492793 DMXL1Q9Y485 3027 aa-0.65□□□□□ -2.51
CLK1-213ENST00000492793 ZZEF1O43149 2961 aa-0.66□□□□□ -2.51
CLK1-213ENST00000492793 COL12A1Q99715 3063 aa-0.66□□□□□ -2.51
CLK1-213ENST00000492793 PRLHP81277 87 aa-0.66□□□□□ -2.52
CLK1-213ENST00000492793 RB1CC1Q8TDY2 1594 aa-0.66□□□□□ -2.52
CLK1-213ENST00000492793 IAPPP10997 89 aa-0.67□□□□□ -2.52
CLK1-213ENST00000492793 COL6A5A8TX70 2615 aa-0.67□□□□□ -2.52
CLK1-213ENST00000492793 ERVK-7P63135 1459 aa-0.67□□□□□ -2.52
CLK1-213ENST00000492793 PLCH1Q4KWH8 1693 aa-0.68□□□□□ -2.52
CLK1-213ENST00000492793 MUC17Q685J3 4493 aa-0.68□□□□□ -2.52
CLK1-213ENST00000492793 DEFB131BA0A096LNP1 70 aa-0.68□□□□□ -2.52
CLK1-213ENST00000492793 DDX60LQ5H9U9 1706 aaKnown RBP-0.68□□□□□ -2.52
CLK1-213ENST00000492793 CCDC18Q5T9S5 1454 aa-0.68□□□□□ -2.52
CLK1-213ENST00000492793 HTTP42858 3142 aa-0.69□□□□□ -2.52
CLK1-213ENST00000492793 DCAF1Q9Y4B6 1507 aa-0.69□□□□□ -2.52
CLK1-213ENST00000492793 CELSR3Q9NYQ7 3312 aa-0.69□□□□□ -2.52
CLK1-213ENST00000492793 MTORP42345 2549 aa-0.69□□□□□ -2.52
CLK1-213ENST00000492793 DNAH11Q96DT5 4516 aa-0.69□□□□□ -2.52
CLK1-213ENST00000492793 ANKRD50Q9ULJ7 1429 aa-0.7□□□□□ -2.52
CLK1-213ENST00000492793 WDR87Q6ZQQ6 2873 aa-0.7□□□□□ -2.52
CLK1-213ENST00000492793 RICTORQ6R327 1708 aa-0.7□□□□□ -2.52
CLK1-213ENST00000492793 ABCC1P33527 1531 aa-0.7□□□□□ -2.52
CLK1-213ENST00000492793 KDM5DQ9BY66 1539 aa-0.7□□□□□ -2.52
CLK1-213ENST00000492793 NIPBLQ6KC79 2804 aaeCLIP-0.7□□□□□ -2.52
CLK1-213ENST00000492793 NBEAL2Q6ZNJ1 2754 aa-0.71□□□□□ -2.52
CLK1-213ENST00000492793 C18orf32Q8TCD1 76 aa-0.71□□□□□ -2.52
CLK1-213ENST00000492793 MAP3K1Q13233 1512 aa-0.71□□□□□ -2.52
CLK1-213ENST00000492793 PKD1L2Q7Z442 2459 aa-0.71□□□□□ -2.52
CLK1-213ENST00000492793 CFAP43Q8NDM7 1665 aa-0.72□□□□□ -2.52
CLK1-213ENST00000492793 CD163L1Q9NR16 1453 aa-0.72□□□□□ -2.52
CLK1-213ENST00000492793 ACACAQ13085 2346 aa-0.72□□□□□ -2.52
CLK1-213ENST00000492793 ITPR3Q14573 2671 aa-0.72□□□□□ -2.52
CLK1-213ENST00000492793 CRIP1P50238 77 aa-0.72□□□□□ -2.52
CLK1-213ENST00000492793 KRTAP20-1Q3LI63 56 aa-0.72□□□□□ -2.52
CLK1-213ENST00000492793 KCNQ1DNQ9H478 68 aa-0.72□□□□□ -2.52
CLK1-213ENST00000492793 S4R3F8 94 aa-0.72□□□□□ -2.52
CLK1-213ENST00000492793 USP9XQ93008 2570 aaPredicted RBP-0.73□□□□□ -2.53
CLK1-213ENST00000492793 ANKRD11Q6UB99 2663 aaPredicted RBP-0.73□□□□□ -2.53
CLK1-213ENST00000492793 GCN1Q92616 2671 aaKnown RBP-0.73□□□□□ -2.53
CLK1-213ENST00000492793 MRPL33O75394 65 aaKnown RBP-0.73□□□□□ -2.53
CLK1-213ENST00000492793 SACSQ9NZJ4 4579 aa-0.73□□□□□ -2.53
CLK1-213ENST00000492793 ARHGAP35Q9NRY4 1499 aa-0.73□□□□□ -2.53
CLK1-213ENST00000492793 TJP1Q07157 1748 aa-0.74□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms