RNA–Protein interactions for RNA: ENST00000492741.5

PSPC1-204, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 1,709 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-204ENST00000492741 C3orf22Q8N5N4 141 aa13.24□□□□□ -0.29
PSPC1-204ENST00000492741 KRTAP17-1Q9BYP8 105 aa13.24□□□□□ -0.29
PSPC1-204ENST00000492741 SMCPP49901 116 aaPredicted RBP13.23□□□□□ -0.29
PSPC1-204ENST00000492741 SPRR1BP22528 89 aa13.22□□□□□ -0.29
PSPC1-204ENST00000492741 NDUFV3P56181 108 aaKnown RBP13.22□□□□□ -0.29
PSPC1-204ENST00000492741 LINC00483Q53H64 154 aa13.21□□□□□ -0.3
PSPC1-204ENST00000492741 A0A1B0GV72 72 aa13.2□□□□□ -0.3
PSPC1-204ENST00000492741 F8WEM9 126 aa13.19□□□□□ -0.3
PSPC1-204ENST00000492741 SMIM29Q86T20 159 aa13.18□□□□□ -0.3
PSPC1-204ENST00000492741 IGLV9-49A0A0B4J1Y8 123 aa13.16□□□□□ -0.3
PSPC1-204ENST00000492741 LINC01600Q96MT4 127 aa13.15□□□□□ -0.3
PSPC1-204ENST00000492741 KRTAP1-4P0C5Y4 121 aa13.14□□□□□ -0.31
PSPC1-204ENST00000492741 BIRC6Q9NR09 4857 aa13.13□□□□□ -0.31
PSPC1-204ENST00000492741 ETDBQ3ZM63 59 aa13.13□□□□□ -0.31
PSPC1-204ENST00000492741 C9orf153Q5TBE3 101 aa13.13□□□□□ -0.31
PSPC1-204ENST00000492741 JMJD7-PLA2G4BH0Y9G9 81 aa13.12□□□□□ -0.31
PSPC1-204ENST00000492741 FAM229BQ4G0N7 80 aa13.12□□□□□ -0.31
PSPC1-204ENST00000492741 CRYGAP11844 174 aa13.11□□□□□ -0.31
PSPC1-204ENST00000492741 RBM3P98179 157 aaKnown RBP13.11□□□□□ -0.31
PSPC1-204ENST00000492741 TEN1Q86WV5 123 aa13.1□□□□□ -0.31
PSPC1-204ENST00000492741 A0A087X002 238 aa13.09□□□□□ -0.31
PSPC1-204ENST00000492741 MOBPQ13875 183 aa13.08□□□□□ -0.32
PSPC1-204ENST00000492741 DSCR8Q96T75 97 aa13.07□□□□□ -0.32
PSPC1-204ENST00000492741 C14orf132Q9NPU4 83 aa13.05□□□□□ -0.32
PSPC1-204ENST00000492741 OBSCN-AS1Q96MR7 158 aa13.05□□□□□ -0.32
PSPC1-204ENST00000492741 KRTAP4-5Q9BYR2 181 aa13.05□□□□□ -0.32
PSPC1-204ENST00000492741 PRR26Q8N8Z3 221 aa13.04□□□□□ -0.32
PSPC1-204ENST00000492741 Q8NBF4 154 aa13.04□□□□□ -0.32
PSPC1-204ENST00000492741 IGLV8-61A0A075B6I0 122 aa13.02□□□□□ -0.32
PSPC1-204ENST00000492741 KRTAP13-2Q52LG2 175 aa13.02□□□□□ -0.32
PSPC1-204ENST00000492741 Q6JHZ5 121 aa13.02□□□□□ -0.33
PSPC1-204ENST00000492741 TYMSOSQ8TAI1 123 aa13.01□□□□□ -0.33
PSPC1-204ENST00000492741 PKHD1L1Q86WI1 4243 aa13□□□□□ -0.33
PSPC1-204ENST00000492741 A0A0G2JQZ4 141 aa12.99□□□□□ -0.33
PSPC1-204ENST00000492741 IGFL1Q6UW32 110 aa12.99□□□□□ -0.33
PSPC1-204ENST00000492741 TRBV7-4A0A0J9YYF1 115 aa12.99□□□□□ -0.33
PSPC1-204ENST00000492741 SSBP3-AS1Q7Z2R9 100 aa12.99□□□□□ -0.33
PSPC1-204ENST00000492741 VPS25Q9BRG1 176 aa12.97□□□□□ -0.33
PSPC1-204ENST00000492741 PDE6GP18545 87 aa12.96□□□□□ -0.33
PSPC1-204ENST00000492741 LOC110117498A0A087WWA1 95 aa12.95□□□□□ -0.34
PSPC1-204ENST00000492741 Q6ZQT0 140 aa12.94□□□□□ -0.34
PSPC1-204ENST00000492741 CCKP06307 115 aa12.93□□□□□ -0.34
PSPC1-204ENST00000492741 HRCT1Q6UXD1 115 aa12.91□□□□□ -0.34
PSPC1-204ENST00000492741 A0A1W2PNM2 257 aa12.88□□□□□ -0.35
PSPC1-204ENST00000492741 C4orf48Q5BLP8 95 aa12.88□□□□□ -0.35
PSPC1-204ENST00000492741 HERC2O95714 4834 aa12.88□□□□□ -0.35
PSPC1-204ENST00000492741 C21orf62-AS1Q17RA5 79 aa12.87□□□□□ -0.35
PSPC1-204ENST00000492741 FLG2Q5D862 2391 aaPredicted RBP12.86□□□□□ -0.35
PSPC1-204ENST00000492741 OXTP01178 125 aa12.84□□□□□ -0.35
PSPC1-204ENST00000492741 LINC00304Q8N9R0 145 aa12.84□□□□□ -0.35
PSPC1-204ENST00000492741 KRTAP10-8P60410 259 aa12.83□□□□□ -0.36
PSPC1-204ENST00000492741 J3QR89 54 aa12.82□□□□□ -0.36
PSPC1-204ENST00000492741 Q6Q795 121 aa12.82□□□□□ -0.36
PSPC1-204ENST00000492741 CD164Q04900 197 aa12.81□□□□□ -0.36
PSPC1-204ENST00000492741 TRBV7-7A0A0K0K1E9 115 aa12.79□□□□□ -0.36
PSPC1-204ENST00000492741 LRP1Q07954 4544 aaKnown RBP12.78□□□□□ -0.36
PSPC1-204ENST00000492741 A0A087WSZ3 146 aa12.78□□□□□ -0.36
PSPC1-204ENST00000492741 SPAG11AQ6PDA7 123 aa12.78□□□□□ -0.36
PSPC1-204ENST00000492741 A0A1B0GW54 56 aa12.76□□□□□ -0.37
PSPC1-204ENST00000492741 SPINK1P00995 79 aa12.76□□□□□ -0.37
PSPC1-204ENST00000492741 KRTAP29-1A8MX34 341 aaPredicted RBP12.75□□□□□ -0.37
PSPC1-204ENST00000492741 MT1HL1P0DM35 61 aa12.74□□□□□ -0.37
PSPC1-204ENST00000492741 FAT3Q8TDW7 4589 aa12.73□□□□□ -0.37
PSPC1-204ENST00000492741 K7ERU9 68 aa12.73□□□□□ -0.37
PSPC1-204ENST00000492741 MYCBP2O75592 4640 aa12.73□□□□□ -0.37
PSPC1-204ENST00000492741 ACYP1P07311 99 aa12.72□□□□□ -0.37
PSPC1-204ENST00000492741 FAM240AA0A1B0GVK7 77 aa12.7□□□□□ -0.38
PSPC1-204ENST00000492741 LIMD2Q9BT23 127 aa12.7□□□□□ -0.38
PSPC1-204ENST00000492741 SS18L2Q9UHA2 77 aa12.7□□□□□ -0.38
PSPC1-204ENST00000492741 LINC00846Q9NV44 126 aa12.69□□□□□ -0.38
PSPC1-204ENST00000492741 J3QL48 77 aa12.68□□□□□ -0.38
PSPC1-204ENST00000492741 ABCA13Q86UQ4 5058 aa12.68□□□□□ -0.38
PSPC1-204ENST00000492741 NREPQ16612 68 aa12.67□□□□□ -0.38
PSPC1-204ENST00000492741 UBL5Q9BZL1 73 aa12.66□□□□□ -0.38
PSPC1-204ENST00000492741 TNXBP22105 4242 aa12.66□□□□□ -0.38
PSPC1-204ENST00000492741 RPS29P62273 56 aaKnown RBP12.65□□□□□ -0.38
PSPC1-204ENST00000492741 Q5XG85 94 aa12.62□□□□□ -0.39
PSPC1-204ENST00000492741 Q6ZVQ6 151 aa12.61□□□□□ -0.39
PSPC1-204ENST00000492741 DEFB116Q30KQ4 102 aa12.57□□□□□ -0.4
PSPC1-204ENST00000492741 ASB16-AS1Q495Z4 193 aa12.57□□□□□ -0.4
PSPC1-204ENST00000492741 DMBT1Q9UGM3 2413 aaPredicted RBP12.54□□□□□ -0.4
PSPC1-204ENST00000492741 LINC00472Q9H8W2 130 aa12.54□□□□□ -0.4
PSPC1-204ENST00000492741 C1orf195Q5TG92 126 aa12.53□□□□□ -0.4
PSPC1-204ENST00000492741 Q96NJ1 140 aa12.51□□□□□ -0.41
PSPC1-204ENST00000492741 BPY2O14599 106 aa12.51□□□□□ -0.41
PSPC1-204ENST00000492741 IGKV4-1P06312 121 aa12.51□□□□□ -0.41
PSPC1-204ENST00000492741 RETNLBQ9BQ08 111 aa12.51□□□□□ -0.41
PSPC1-204ENST00000492741 SIGMAR1Q99720 223 aa12.5□□□□□ -0.41
PSPC1-204ENST00000492741 CDIP1Q9H305 208 aa12.49□□□□□ -0.41
PSPC1-204ENST00000492741 J3KT08 172 aa12.47□□□□□ -0.41
PSPC1-204ENST00000492741 LINC00643Q86TS7 51 aa12.47□□□□□ -0.41
PSPC1-204ENST00000492741 IGKV3D-7A0A0C4DH55 119 aa12.43□□□□□ -0.42
PSPC1-204ENST00000492741 PCLOQ9Y6V0 5065 aa12.41□□□□□ -0.42
PSPC1-204ENST00000492741 CXCL6P80162 114 aa12.4□□□□□ -0.42
PSPC1-204ENST00000492741 ATP5EP2Q5VTU8 51 aa12.4□□□□□ -0.43
PSPC1-204ENST00000492741 NDUFB1O75438 58 aa12.39□□□□□ -0.43
PSPC1-204ENST00000492741 DSCR10P59022 87 aa12.38□□□□□ -0.43
PSPC1-204ENST00000492741 A8MWP4 228 aa12.37□□□□□ -0.43
PSPC1-204ENST00000492741 PRR4Q16378 134 aa12.35□□□□□ -0.43
PSPC1-204ENST00000492741 Q8N9L7 120 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms