RNA–Protein interactions for RNA: ENST00000487109.5

ABCA2-218, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 8,031 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-218ENST00000487109 ITPR3Q14573 2671 aa7.74□□□□□ -1.17
ABCA2-218ENST00000487109 CHD6Q8TD26 2715 aa7.74□□□□□ -1.17
ABCA2-218ENST00000487109 ZCCHC13Q8WW36 166 aaKnown RBP7.74□□□□□ -1.17
ABCA2-218ENST00000487109 TNP2Q05952 138 aa7.73□□□□□ -1.17
ABCA2-218ENST00000487109 NBEAL1Q6ZS30 2694 aa7.71□□□□□ -1.17
ABCA2-218ENST00000487109 H1FX-AS1Q4G0G2 97 aa7.71□□□□□ -1.18
ABCA2-218ENST00000487109 LAMA3Q16787 3333 aa7.7□□□□□ -1.18
ABCA2-218ENST00000487109 A0A0C4DFX4 3053 aa7.69□□□□□ -1.18
ABCA2-218ENST00000487109 STAB1Q9NY15 2570 aa7.69□□□□□ -1.18
ABCA2-218ENST00000487109 PLAC4Q8WY50 150 aa7.69□□□□□ -1.18
ABCA2-218ENST00000487109 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.68□□□□□ -1.18
ABCA2-218ENST00000487109 SEC61BP60468 96 aaKnown RBP7.67□□□□□ -1.18
ABCA2-218ENST00000487109 TEX15Q9BXT5 2789 aa7.67□□□□□ -1.18
ABCA2-218ENST00000487109 PRAC1Q96KF2 57 aa7.66□□□□□ -1.18
ABCA2-218ENST00000487109 LINC01558Q9Y6Z2 57 aa7.65□□□□□ -1.18
ABCA2-218ENST00000487109 ROMO1P60602 79 aa7.65□□□□□ -1.19
ABCA2-218ENST00000487109 FREM2Q5SZK8 3169 aa7.65□□□□□ -1.19
ABCA2-218ENST00000487109 CDH23Q9H251 3354 aa7.64□□□□□ -1.19
ABCA2-218ENST00000487109 Q8N9P0 234 aaPredicted RBP7.63□□□□□ -1.19
ABCA2-218ENST00000487109 CELSR3Q9NYQ7 3312 aa7.62□□□□□ -1.19
ABCA2-218ENST00000487109 REV3LO60673 3130 aa7.61□□□□□ -1.19
ABCA2-218ENST00000487109 PLAC8Q9NZF1 115 aa7.61□□□□□ -1.19
ABCA2-218ENST00000487109 DMBT1Q9UGM3 2413 aaPredicted RBP7.6□□□□□ -1.19
ABCA2-218ENST00000487109 HELZ2Q9BYK8 2649 aaKnown RBP7.6□□□□□ -1.19
ABCA2-218ENST00000487109 M0QZ58 72 aa7.6□□□□□ -1.19
ABCA2-218ENST00000487109 RPL37P61927 97 aaKnown RBP7.6□□□□□ -1.19
ABCA2-218ENST00000487109 Q5W150 140 aa7.6□□□□□ -1.19
ABCA2-218ENST00000487109 MMP24-AS1A0A0U1RRL7 71 aa7.58□□□□□ -1.2
ABCA2-218ENST00000487109 COL6A5A8TX70 2615 aa7.57□□□□□ -1.2
ABCA2-218ENST00000487109 Q5VV11 94 aa7.54□□□□□ -1.2
ABCA2-218ENST00000487109 UNC79Q9P2D8 2635 aa7.53□□□□□ -1.2
ABCA2-218ENST00000487109 HTTP42858 3142 aa7.53□□□□□ -1.2
ABCA2-218ENST00000487109 SZT2Q5T011 3432 aa7.53□□□□□ -1.2
ABCA2-218ENST00000487109 CHD7Q9P2D1 2997 aa7.52□□□□□ -1.21
ABCA2-218ENST00000487109 TRIOO75962 3097 aa7.51□□□□□ -1.21
ABCA2-218ENST00000487109 KMT2BQ9UMN6 2715 aaPredicted RBP7.51□□□□□ -1.21
ABCA2-218ENST00000487109 RANBP2P49792 3224 aaKnown RBP7.5□□□□□ -1.21
ABCA2-218ENST00000487109 Q5VSD8 79 aa7.5□□□□□ -1.21
ABCA2-218ENST00000487109 ADM2Q7Z4H4 148 aa7.5□□□□□ -1.21
ABCA2-218ENST00000487109 SPRR1AP35321 89 aa7.5□□□□□ -1.21
ABCA2-218ENST00000487109 VPS13AQ96RL7 3174 aa7.49□□□□□ -1.21
ABCA2-218ENST00000487109 SPRR1BP22528 89 aa7.47□□□□□ -1.21
ABCA2-218ENST00000487109 MAP1AP78559 2803 aaPredicted RBP7.47□□□□□ -1.21
ABCA2-218ENST00000487109 NOTCH1P46531 2555 aa7.47□□□□□ -1.21
ABCA2-218ENST00000487109 PRUNE2Q8WUY3 3088 aa7.46□□□□□ -1.21
ABCA2-218ENST00000487109 Q5XG85 94 aa7.46□□□□□ -1.22
ABCA2-218ENST00000487109 STAB2Q8WWQ8 2551 aa7.45□□□□□ -1.22
ABCA2-218ENST00000487109 LINC00472Q9H8W2 130 aa7.44□□□□□ -1.22
ABCA2-218ENST00000487109 FP248Q71RG6 208 aaPredicted RBP7.43□□□□□ -1.22
ABCA2-218ENST00000487109 GCN1Q92616 2671 aaKnown RBP7.43□□□□□ -1.22
ABCA2-218ENST00000487109 KRTAP16-1A8MUX0 517 aa7.42□□□□□ -1.22
ABCA2-218ENST00000487109 SPTBN5Q9NRC6 3674 aaKnown RBP7.42□□□□□ -1.22
ABCA2-218ENST00000487109 MGAQ8IWI9 3026 aa7.42□□□□□ -1.22
ABCA2-218ENST00000487109 USP34Q70CQ2 3546 aa7.42□□□□□ -1.22
ABCA2-218ENST00000487109 LCE6AA0A183 80 aa7.41□□□□□ -1.22
ABCA2-218ENST00000487109 TEP1Q99973 2627 aaKnown RBP7.41□□□□□ -1.22
ABCA2-218ENST00000487109 C20orf166-AS1Q96NR2 134 aa7.41□□□□□ -1.22
ABCA2-218ENST00000487109 UNC80Q8N2C7 3258 aa7.41□□□□□ -1.22
ABCA2-218ENST00000487109 SPATA8Q6RVD6 105 aa7.39□□□□□ -1.23
ABCA2-218ENST00000487109 OXTP01178 125 aa7.38□□□□□ -1.23
ABCA2-218ENST00000487109 SETXQ7Z333 2677 aaKnown RBP7.36□□□□□ -1.23
ABCA2-218ENST00000487109 Q8NDZ9 215 aa7.35□□□□□ -1.23
ABCA2-218ENST00000487109 BAHCC1Q9P281 2608 aa7.35□□□□□ -1.23
ABCA2-218ENST00000487109 LAMA1P25391 3075 aa7.34□□□□□ -1.23
ABCA2-218ENST00000487109 KRTAP26-1Q6PEX3 210 aa7.34□□□□□ -1.24
ABCA2-218ENST00000487109 WDFY4Q6ZS81 3184 aa7.33□□□□□ -1.24
ABCA2-218ENST00000487109 ASB16-AS1Q495Z4 193 aa7.32□□□□□ -1.24
ABCA2-218ENST00000487109 CYSTM1Q9H1C7 97 aa7.32□□□□□ -1.24
ABCA2-218ENST00000487109 FRYQ5TBA9 3013 aa7.32□□□□□ -1.24
ABCA2-218ENST00000487109 TRANK1O15050 2925 aa7.32□□□□□ -1.24
ABCA2-218ENST00000487109 VCANP13611 3396 aa7.31□□□□□ -1.24
ABCA2-218ENST00000487109 Q6ZR54 194 aa7.3□□□□□ -1.24
ABCA2-218ENST00000487109 MYO15AQ9UKN7 3530 aa7.3□□□□□ -1.24
ABCA2-218ENST00000487109 PANO1I0J062 215 aa7.3□□□□□ -1.24
ABCA2-218ENST00000487109 APCP25054 2843 aa7.29□□□□□ -1.24
ABCA2-218ENST00000487109 ITPR2Q14571 2701 aa7.29□□□□□ -1.24
ABCA2-218ENST00000487109 DSPP15924 2871 aaKnown RBP7.27□□□□□ -1.25
ABCA2-218ENST00000487109 KRTAP10-1P60331 282 aa7.26□□□□□ -1.25
ABCA2-218ENST00000487109 NBEAL2Q6ZNJ1 2754 aa7.26□□□□□ -1.25
ABCA2-218ENST00000487109 KRTAP1-5Q9BYS1 174 aa7.25□□□□□ -1.25
ABCA2-218ENST00000487109 CRYBG3Q68DQ2 2970 aa7.24□□□□□ -1.25
ABCA2-218ENST00000487109 KALRNO60229 2985 aa7.23□□□□□ -1.25
ABCA2-218ENST00000487109 A8MUU9 505 aa7.23□□□□□ -1.25
ABCA2-218ENST00000487109 KRTAP10-2P60368 255 aa7.22□□□□□ -1.25
ABCA2-218ENST00000487109 RPS29P62273 56 aaKnown RBP7.2□□□□□ -1.26
ABCA2-218ENST00000487109 EYSQ5T1H1 3165 aa7.2□□□□□ -1.26
ABCA2-218ENST00000487109 CHD9Q3L8U1 2897 aa7.19□□□□□ -1.26
ABCA2-218ENST00000487109 ZNF292O60281 2723 aa7.19□□□□□ -1.26
ABCA2-218ENST00000487109 COL6A3P12111 3177 aa7.19□□□□□ -1.26
ABCA2-218ENST00000487109 SPEGQ15772 3267 aa7.19□□□□□ -1.26
ABCA2-218ENST00000487109 KRTAP25-1Q3LHN0 102 aa7.18□□□□□ -1.26
ABCA2-218ENST00000487109 WDFY3Q8IZQ1 3526 aa7.17□□□□□ -1.26
ABCA2-218ENST00000487109 ASH1LQ9NR48 2969 aaKnown RBP7.15□□□□□ -1.26
ABCA2-218ENST00000487109 DMXL2Q8TDJ6 3036 aa7.14□□□□□ -1.27
ABCA2-218ENST00000487109 NSD1Q96L73 2696 aaPredicted RBP7.13□□□□□ -1.27
ABCA2-218ENST00000487109 KRTAP4-16G5E9R7 235 aaPredicted RBP7.13□□□□□ -1.27
ABCA2-218ENST00000487109 CFAP47Q6ZTR5 3102 aa7.12□□□□□ -1.27
ABCA2-218ENST00000487109 TNP1P09430 55 aa7.11□□□□□ -1.27
ABCA2-218ENST00000487109 NDUFAF8A1L188 74 aa7.11□□□□□ -1.27
ABCA2-218ENST00000487109 A0A087X002 238 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms