RNA–Protein interactions for RNA: ENST00000479485.5

SSR1-207, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 2

Gene SSR1, Length 640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-207ENST00000479485 EP300Q09472 2414 aaPredicted RBP2.63□□□□□ -1.99
SSR1-207ENST00000479485 LAMA2P24043 3122 aaKnown RBP2.63□□□□□ -1.99
SSR1-207ENST00000479485 USP34Q70CQ2 3546 aa2.63□□□□□ -1.99
SSR1-207ENST00000479485 K7ERS5 55 aa2.62□□□□□ -1.99
SSR1-207ENST00000479485 LCE3DQ9BYE3 92 aa2.62□□□□□ -1.99
SSR1-207ENST00000479485 A0A1B0GVX0 72 aa2.61□□□□□ -1.99
SSR1-207ENST00000479485 LINC01556Q5JQF7 62 aa2.61□□□□□ -1.99
SSR1-207ENST00000479485 KRTAP26-1Q6PEX3 210 aa2.61□□□□□ -1.99
SSR1-207ENST00000479485 MUC19Q7Z5P9 8384 aa2.61□□□□□ -1.99
SSR1-207ENST00000479485 FRYQ5TBA9 3013 aa2.61□□□□□ -1.99
SSR1-207ENST00000479485 CREBBPQ92793 2442 aa2.61□□□□□ -1.99
SSR1-207ENST00000479485 PTPRZ1P23471 2315 aaPredicted RBP2.6□□□□□ -1.99
SSR1-207ENST00000479485 IGLV7-43P04211 117 aa2.6□□□□□ -1.99
SSR1-207ENST00000479485 AKAP6Q13023 2319 aa2.6□□□□□ -1.99
SSR1-207ENST00000479485 PIEZO2Q9H5I5 2752 aa2.6□□□□□ -1.99
SSR1-207ENST00000479485 VCANP13611 3396 aa2.6□□□□□ -1.99
SSR1-207ENST00000479485 CR1P17927 2039 aa2.59□□□□□ -1.99
SSR1-207ENST00000479485 TRIOO75962 3097 aa2.59□□□□□ -1.99
SSR1-207ENST00000479485 CEP290O15078 2479 aa2.59□□□□□ -1.99
SSR1-207ENST00000479485 HTN3P15516 51 aa2.58□□□□□ -2
SSR1-207ENST00000479485 SPTBN5Q9NRC6 3674 aaKnown RBP2.58□□□□□ -2
SSR1-207ENST00000479485 LAMA3Q16787 3333 aa2.58□□□□□ -2
SSR1-207ENST00000479485 LAMA1P25391 3075 aa2.57□□□□□ -2
SSR1-207ENST00000479485 C2CD3Q4AC94 2353 aa2.57□□□□□ -2
SSR1-207ENST00000479485 LY6G6CO95867 125 aa2.57□□□□□ -2
SSR1-207ENST00000479485 FRYLO94915 3013 aa2.56□□□□□ -2
SSR1-207ENST00000479485 NUPR2A6NF83 97 aa2.56□□□□□ -2
SSR1-207ENST00000479485 DEFB135Q30KP9 77 aa2.56□□□□□ -2
SSR1-207ENST00000479485 LINC00483Q53H64 154 aa2.56□□□□□ -2
SSR1-207ENST00000479485 MGAQ8IWI9 3026 aa2.56□□□□□ -2
SSR1-207ENST00000479485 CFAP54Q96N23 3096 aa2.56□□□□□ -2
SSR1-207ENST00000479485 WDFY3Q8IZQ1 3526 aa2.56□□□□□ -2
SSR1-207ENST00000479485 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.56□□□□□ -22e-8■■□□□ 12.6
SSR1-207ENST00000479485 KALRNO60229 2985 aa2.55□□□□□ -2
SSR1-207ENST00000479485 A8MUU9 505 aa2.55□□□□□ -2
SSR1-207ENST00000479485 DSPP15924 2871 aaKnown RBP2.55□□□□□ -2
SSR1-207ENST00000479485 PRLHP81277 87 aa2.55□□□□□ -2
SSR1-207ENST00000479485 Q96NJ1 140 aa2.55□□□□□ -2
SSR1-207ENST00000479485 ZDBF2Q9HCK1 2354 aa2.55□□□□□ -2
SSR1-207ENST00000479485 CFAP47Q6ZTR5 3102 aa2.54□□□□□ -2
SSR1-207ENST00000479485 ABCA2Q9BZC7 2435 aa2.54□□□□□ -2
SSR1-207ENST00000479485 NCOR1O75376 2440 aa2.53□□□□□ -2
SSR1-207ENST00000479485 PRRC2CQ9Y520 2896 aaKnown RBP2.53□□□□□ -2
SSR1-207ENST00000479485 CDH23Q9H251 3354 aa2.53□□□□□ -2
SSR1-207ENST00000479485 SPTAN1Q13813 2472 aaKnown RBP2.53□□□□□ -2
SSR1-207ENST00000479485 WDFY4Q6ZS81 3184 aa2.53□□□□□ -2.01
SSR1-207ENST00000479485 PRUNE2Q8WUY3 3088 aa2.53□□□□□ -2.01
SSR1-207ENST00000479485 FREM2Q5SZK8 3169 aa2.52□□□□□ -2.01
SSR1-207ENST00000479485 REV3LO60673 3130 aa2.52□□□□□ -2.01
SSR1-207ENST00000479485 A0A0G2JQZ4 141 aa2.52□□□□□ -2.01
SSR1-207ENST00000479485 A0A1W2PNN7 141 aa2.52□□□□□ -2.01
SSR1-207ENST00000479485 SPINT4Q6UDR6 99 aa2.52□□□□□ -2.01
SSR1-207ENST00000479485 ALMS1Q8TCU4 4167 aa2.51□□□□□ -2.01
SSR1-207ENST00000479485 TRIOBPQ9H2D6 2365 aa2.51□□□□□ -2.01
SSR1-207ENST00000479485 DEFB4AO15263 64 aa2.51□□□□□ -2.01
SSR1-207ENST00000479485 Q5W150 140 aa2.51□□□□□ -2.01
SSR1-207ENST00000479485 LINC00304Q8N9R0 145 aa2.51□□□□□ -2.01
SSR1-207ENST00000479485 ACACAQ13085 2346 aa2.51□□□□□ -2.01
SSR1-207ENST00000479485 C20orf166-AS1Q96NR2 134 aa2.5□□□□□ -2.01
SSR1-207ENST00000479485 KMT2BQ9UMN6 2715 aaPredicted RBP2.5□□□□□ -2.01
SSR1-207ENST00000479485 MYO15AQ9UKN7 3530 aa2.5□□□□□ -2.01
SSR1-207ENST00000479485 SPEGQ15772 3267 aa2.49□□□□□ -2.01
SSR1-207ENST00000479485 DCHS1Q96JQ0 3298 aa2.49□□□□□ -2.01
SSR1-207ENST00000479485 P0C880 135 aa2.49□□□□□ -2.01
SSR1-207ENST00000479485 DEFB113Q30KQ7 82 aa2.49□□□□□ -2.01
SSR1-207ENST00000479485 DEFB123Q8N688 67 aa2.49□□□□□ -2.01
SSR1-207ENST00000479485 DMDP11532 3685 aa2.49□□□□□ -2.01
SSR1-207ENST00000479485 SPTA1P02549 2419 aa2.49□□□□□ -2.01
SSR1-207ENST00000479485 SPRR5A0A1B0GTR4 108 aa2.48□□□□□ -2.01
SSR1-207ENST00000479485 A0A1B0GU33 70 aa2.48□□□□□ -2.01
SSR1-207ENST00000479485 SSBP3-AS1Q7Z2R9 100 aa2.48□□□□□ -2.01
SSR1-207ENST00000479485 AKAP13Q12802 2813 aa2.48□□□□□ -2.01
SSR1-207ENST00000479485 TACC2O95359 2948 aa2.48□□□□□ -2.01
SSR1-207ENST00000479485 A0A096LNI7 61 aa2.47□□□□□ -2.01
SSR1-207ENST00000479485 COX6B2Q6YFQ2 88 aa2.47□□□□□ -2.01
SSR1-207ENST00000479485 KRTAP13-1Q8IUC0 172 aa2.47□□□□□ -2.01
SSR1-207ENST00000479485 MAP1AP78559 2803 aaPredicted RBP2.47□□□□□ -2.01
SSR1-207ENST00000479485 DMXL2Q8TDJ6 3036 aa2.47□□□□□ -2.01
SSR1-207ENST00000479485 SMG1Q96Q15 3661 aaKnown RBP2.46□□□□□ -2.02
SSR1-207ENST00000479485 H1FX-AS1Q4G0G2 97 aa2.46□□□□□ -2.02
SSR1-207ENST00000479485 PP632Q6XCG6 107 aa2.46□□□□□ -2.02
SSR1-207ENST00000479485 SPG11Q96JI7 2443 aa2.46□□□□□ -2.02
SSR1-207ENST00000479485 ZFHX4Q86UP3 3567 aa2.45□□□□□ -2.02
SSR1-207ENST00000479485 A0A087WTM6 91 aa2.45□□□□□ -2.02
SSR1-207ENST00000479485 H0YAA0 97 aa2.45□□□□□ -2.02
SSR1-207ENST00000479485 K7EIL1 84 aa2.45□□□□□ -2.02
SSR1-207ENST00000479485 LUZP6Q538Z0 58 aa2.45□□□□□ -2.02
SSR1-207ENST00000479485 OTOGLQ3ZCN5 2332 aa2.45□□□□□ -2.02
SSR1-207ENST00000479485 CSPG4Q6UVK1 2322 aa2.45□□□□□ -2.02
SSR1-207ENST00000479485 NBASA2RRP1 2371 aa2.44□□□□□ -2.02
SSR1-207ENST00000479485 CELSR3Q9NYQ7 3312 aa2.44□□□□□ -2.02
SSR1-207ENST00000479485 Q6ZSA8 131 aa2.44□□□□□ -2.02
SSR1-207ENST00000479485 PSORS1C2Q9UIG4 136 aa2.44□□□□□ -2.02
SSR1-207ENST00000479485 SPENQ96T58 3664 aaKnown RBP2.44□□□□□ -2.02
SSR1-207ENST00000479485 KRTAP10-10P60014 251 aa2.43□□□□□ -2.02
SSR1-207ENST00000479485 KRTAP5-7Q6L8G8 165 aa2.43□□□□□ -2.02
SSR1-207ENST00000479485 SPINK6Q6UWN8 80 aa2.43□□□□□ -2.02
SSR1-207ENST00000479485 CRIPTQ9P021 101 aa2.43□□□□□ -2.02
SSR1-207ENST00000479485 ADGRG4Q8IZF6 3080 aa2.43□□□□□ -2.02
SSR1-207ENST00000479485 TLN1Q9Y490 2541 aaKnown RBP2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms