RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 TPRXLQ17RH7 258 aa1.53□□□□□ -2.16
CD46-213ENST00000471987 RIF1Q5UIP0 2472 aaKnown RBP1.53□□□□□ -2.16
CD46-213ENST00000471987 COA5Q86WW8 74 aa1.53□□□□□ -2.16
CD46-213ENST00000471987 C5orf56Q8N8D9 126 aa1.53□□□□□ -2.16
CD46-213ENST00000471987 UNC13CQ8NB66 2214 aa1.53□□□□□ -2.16
CD46-213ENST00000471987 SPACA4Q8TDM5 124 aa1.53□□□□□ -2.16
CD46-213ENST00000471987 KCNQ1DNQ9H478 68 aa1.53□□□□□ -2.16
CD46-213ENST00000471987 LINC00472Q9H8W2 130 aa1.53□□□□□ -2.16
CD46-213ENST00000471987 TIMM8BQ9Y5J9 83 aaPredicted RBP1.53□□□□□ -2.16
CD46-213ENST00000471987 DMXL2Q8TDJ6 3036 aa1.53□□□□□ -2.17
CD46-213ENST00000471987 ATRQ13535 2644 aa1.53□□□□□ -2.17
CD46-213ENST00000471987 NOTCH1P46531 2555 aa1.53□□□□□ -2.17
CD46-213ENST00000471987 FAM186AA6NE01 2351 aa1.52□□□□□ -2.17
CD46-213ENST00000471987 BRWD1Q9NSI6 2320 aa1.52□□□□□ -2.17
CD46-213ENST00000471987 FLNAP21333 2647 aaKnown RBP1.52□□□□□ -2.17
CD46-213ENST00000471987 TRGV1A0A0A0MS02 117 aa1.52□□□□□ -2.17
CD46-213ENST00000471987 LINC00959A0A1B0GUT2 108 aa1.52□□□□□ -2.17
CD46-213ENST00000471987 H0YGX0 51 aa1.52□□□□□ -2.17
CD46-213ENST00000471987 PIN1P1O15428 100 aa1.52□□□□□ -2.17
CD46-213ENST00000471987 DEFB123Q8N688 67 aa1.52□□□□□ -2.17
CD46-213ENST00000471987 Q96NJ1 140 aa1.52□□□□□ -2.17
CD46-213ENST00000471987 CCDC168Q8NDH2 2452 aa1.52□□□□□ -2.17
CD46-213ENST00000471987 FLNCQ14315 2725 aa1.52□□□□□ -2.17
CD46-213ENST00000471987 COL6A5A8TX70 2615 aa1.52□□□□□ -2.17
CD46-213ENST00000471987 CELSR2Q9HCU4 2923 aa1.51□□□□□ -2.17
CD46-213ENST00000471987 CUBNO60494 3623 aa1.51□□□□□ -2.17
CD46-213ENST00000471987 STAB1Q9NY15 2570 aa1.51□□□□□ -2.17
CD46-213ENST00000471987 TRGV2A0A075B6R0 118 aa1.51□□□□□ -2.17
CD46-213ENST00000471987 ETDCA0A1B0GVM5 59 aa1.51□□□□□ -2.17
CD46-213ENST00000471987 NDUFA3O95167 84 aa1.51□□□□□ -2.17
CD46-213ENST00000471987 COX7BP24311 80 aa1.51□□□□□ -2.17
CD46-213ENST00000471987 DEFB134Q4QY38 66 aa1.51□□□□□ -2.17
CD46-213ENST00000471987 IGF2RP11717 2491 aa1.51□□□□□ -2.17
CD46-213ENST00000471987 SPTA1P02549 2419 aa1.51□□□□□ -2.17
CD46-213ENST00000471987 PCNX1Q96RV3 2341 aa1.51□□□□□ -2.17
CD46-213ENST00000471987 SDK1Q7Z5N4 2213 aa1.51□□□□□ -2.17
CD46-213ENST00000471987 LRRK2Q5S007 2527 aa1.5□□□□□ -2.17
CD46-213ENST00000471987 LRBAP50851 2863 aa1.5□□□□□ -2.17
CD46-213ENST00000471987 CHD9Q3L8U1 2897 aa1.5□□□□□ -2.17
CD46-213ENST00000471987 CACNA1HO95180 2353 aa1.5□□□□□ -2.17
CD46-213ENST00000471987 FN1P02751 2386 aaKnown RBP1.5□□□□□ -2.17
CD46-213ENST00000471987 A0A1B0GU69 56 aa1.5□□□□□ -2.17
CD46-213ENST00000471987 INE1O15225 51 aa1.5□□□□□ -2.17
CD46-213ENST00000471987 HAMPP81172 84 aa1.5□□□□□ -2.17
CD46-213ENST00000471987 MUC2Q02817 5179 aa1.5□□□□□ -2.17
CD46-213ENST00000471987 BSNQ9UPA5 3926 aa1.49□□□□□ -2.17
CD46-213ENST00000471987 M0R2N4 97 aa1.49□□□□□ -2.17
CD46-213ENST00000471987 ACYP2P14621 99 aa1.49□□□□□ -2.17
CD46-213ENST00000471987 KRTAP21-3Q3LHN1 58 aa1.49□□□□□ -2.17
CD46-213ENST00000471987 TNCP24821 2201 aa1.49□□□□□ -2.17
CD46-213ENST00000471987 SORL1Q92673 2214 aa1.49□□□□□ -2.17
CD46-213ENST00000471987 MGAQ8IWI9 3026 aa1.49□□□□□ -2.17
CD46-213ENST00000471987 HERC1Q15751 4861 aa1.49□□□□□ -2.17
CD46-213ENST00000471987 CACNA1CQ13936 2221 aa1.48□□□□□ -2.17
CD46-213ENST00000471987 FREM1Q5H8C1 2179 aa1.48□□□□□ -2.17
CD46-213ENST00000471987 OTOGQ6ZRI0 2925 aa1.48□□□□□ -2.17
CD46-213ENST00000471987 H3BRN7 92 aa1.48□□□□□ -2.17
CD46-213ENST00000471987 NCR3O14931 201 aa1.48□□□□□ -2.17
CD46-213ENST00000471987 FXYD4P59646 89 aa1.48□□□□□ -2.17
CD46-213ENST00000471987 RPL38P63173 70 aaKnown RBP1.48□□□□□ -2.17
CD46-213ENST00000471987 ADGRG4Q8IZF6 3080 aa1.47□□□□□ -2.17
CD46-213ENST00000471987 CEP295Q9C0D2 2601 aa1.47□□□□□ -2.17
CD46-213ENST00000471987 MRPL33O75394 65 aaKnown RBP1.47□□□□□ -2.17
CD46-213ENST00000471987 ITPR2Q14571 2701 aa1.47□□□□□ -2.17
CD46-213ENST00000471987 SSC5DA1L4H1 1573 aa1.47□□□□□ -2.17
CD46-213ENST00000471987 GOLGA4Q13439 2230 aaKnown RBP1.46□□□□□ -2.18
CD46-213ENST00000471987 TGP01266 2768 aa1.46□□□□□ -2.18
CD46-213ENST00000471987 CSMD2Q7Z408 3487 aa1.46□□□□□ -2.18
CD46-213ENST00000471987 DEFB131BA0A096LNP1 70 aa1.46□□□□□ -2.18
CD46-213ENST00000471987 CPSF4LA6NMK7 179 aaKnown RBP1.46□□□□□ -2.18
CD46-213ENST00000471987 LY6G6CO95867 125 aa1.46□□□□□ -2.18
CD46-213ENST00000471987 CNFNQ9BYD5 112 aa1.46□□□□□ -2.18
CD46-213ENST00000471987 VPS13CQ709C8 3753 aa1.46□□□□□ -2.18
CD46-213ENST00000471987 ANK2Q01484 3957 aa1.46□□□□□ -2.18
CD46-213ENST00000471987 ALPK2Q86TB3 2170 aa1.45□□□□□ -2.18
CD46-213ENST00000471987 UTP20O75691 2785 aaKnown RBP1.45□□□□□ -2.18
CD46-213ENST00000471987 USP9YO00507 2555 aaPredicted RBP1.45□□□□□ -2.18
CD46-213ENST00000471987 KRTAP12-1P59990 96 aa1.45□□□□□ -2.18
CD46-213ENST00000471987 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.45□□□□□ -2.18
CD46-213ENST00000471987 Q6ZQY7 126 aa1.45□□□□□ -2.18
CD46-213ENST00000471987 SMIM2Q9BVW6 85 aa1.45□□□□□ -2.18
CD46-213ENST00000471987 MED13LQ71F56 2210 aa1.45□□□□□ -2.18
CD46-213ENST00000471987 SACSQ9NZJ4 4579 aa1.45□□□□□ -2.18
CD46-213ENST00000471987 AKAP13Q12802 2813 aa1.45□□□□□ -2.18
CD46-213ENST00000471987 PRKDCP78527 4128 aaKnown RBP1.45□□□□□ -2.18
CD46-213ENST00000471987 ANKHD1Q8IWZ3 2542 aaKnown RBP1.44□□□□□ -2.18
CD46-213ENST00000471987 ATMQ13315 3056 aa1.44□□□□□ -2.18
CD46-213ENST00000471987 ABCA13Q86UQ4 5058 aa1.44□□□□□ -2.18
CD46-213ENST00000471987 HIVEP3Q5T1R4 2406 aa1.44□□□□□ -2.18
CD46-213ENST00000471987 CREBBPQ92793 2442 aa1.44□□□□□ -2.18
CD46-213ENST00000471987 TFF3Q07654 80 aa1.44□□□□□ -2.18
CD46-213ENST00000471987 SMIM11BQ8TCY0 68 aa1.44□□□□□ -2.18
CD46-213ENST00000471987 CCL19Q99731 98 aa1.44□□□□□ -2.18
CD46-213ENST00000471987 F5P12259 2224 aa1.44□□□□□ -2.18
CD46-213ENST00000471987 ZANQ9Y493 2812 aa1.43□□□□□ -2.18
CD46-213ENST00000471987 G3V318 75 aa1.43□□□□□ -2.18
CD46-213ENST00000471987 ANGP03950 147 aaKnown RBP1.43□□□□□ -2.18
CD46-213ENST00000471987 C10orf99Q6UWK7 81 aa1.43□□□□□ -2.18
CD46-213ENST00000471987 MTORP42345 2549 aa1.43□□□□□ -2.18
CD46-213ENST00000471987 PRRC2CQ9Y520 2896 aaKnown RBP1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms