RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 F8WEM9 126 aa11.08□□□□□ -0.64
SMC4-211ENST00000469858 SRRM2Q9UQ35 2752 aaKnown RBP11.08□□□□□ -0.64
SMC4-211ENST00000469858 A0A1B0GVY2 172 aa11.06□□□□□ -0.64
SMC4-211ENST00000469858 ZNF861PO60384 105 aa11.06□□□□□ -0.64
SMC4-211ENST00000469858 SPRR1BP22528 89 aa11.06□□□□□ -0.64
SMC4-211ENST00000469858 IGLV7-43P04211 117 aa11.04□□□□□ -0.64
SMC4-211ENST00000469858 LINC00643Q86TS7 51 aa11.04□□□□□ -0.64
SMC4-211ENST00000469858 PKHD1P08F94 4074 aa11.04□□□□□ -0.64
SMC4-211ENST00000469858 C21orf62-AS1Q17RA5 79 aa11.02□□□□□ -0.65
SMC4-211ENST00000469858 SPRR4Q96PI1 79 aa11.02□□□□□ -0.65
SMC4-211ENST00000469858 UBL5Q9BZL1 73 aa11□□□□□ -0.65
SMC4-211ENST00000469858 ZNF706Q9Y5V0 76 aaPredicted RBP10.99□□□□□ -0.65
SMC4-211ENST00000469858 IGLV8-61A0A075B6I0 122 aa10.98□□□□□ -0.65
SMC4-211ENST00000469858 A0A0G2JQZ4 141 aa10.98□□□□□ -0.65
SMC4-211ENST00000469858 A0A1W2PNM2 257 aa10.98□□□□□ -0.65
SMC4-211ENST00000469858 IGFL1Q6UW32 110 aa10.97□□□□□ -0.65
SMC4-211ENST00000469858 Q8NBF4 154 aa10.97□□□□□ -0.65
SMC4-211ENST00000469858 LINC00483Q53H64 154 aa10.96□□□□□ -0.66
SMC4-211ENST00000469858 LRP1BQ9NZR2 4599 aa10.95□□□□□ -0.66
SMC4-211ENST00000469858 IGKV3D-7A0A0C4DH55 119 aa10.95□□□□□ -0.66
SMC4-211ENST00000469858 Q6JHZ5 121 aa10.95□□□□□ -0.66
SMC4-211ENST00000469858 Q6ZVQ6 151 aa10.95□□□□□ -0.66
SMC4-211ENST00000469858 IGLV9-49A0A0B4J1Y8 123 aa10.93□□□□□ -0.66
SMC4-211ENST00000469858 TRBV7-7A0A0K0K1E9 115 aa10.93□□□□□ -0.66
SMC4-211ENST00000469858 ANAPC11Q9NYG5 84 aa10.93□□□□□ -0.66
SMC4-211ENST00000469858 DYNC1H1Q14204 4646 aaKnown RBP10.91□□□□□ -0.66
SMC4-211ENST00000469858 C9orf153Q5TBE3 101 aa10.91□□□□□ -0.66
SMC4-211ENST00000469858 A0A1B0GW54 56 aa10.89□□□□□ -0.67
SMC4-211ENST00000469858 Q6Q795 121 aa10.89□□□□□ -0.67
SMC4-211ENST00000469858 SCGB1A1P11684 91 aa10.88□□□□□ -0.67
SMC4-211ENST00000469858 CRYGAP11844 174 aa10.88□□□□□ -0.67
SMC4-211ENST00000469858 ATP5EP2Q5VTU8 51 aa10.88□□□□□ -0.67
SMC4-211ENST00000469858 IMUPQ9GZP8 106 aa10.88□□□□□ -0.67
SMC4-211ENST00000469858 NREPQ16612 68 aa10.87□□□□□ -0.67
SMC4-211ENST00000469858 MOBPQ13875 183 aa10.85□□□□□ -0.67
SMC4-211ENST00000469858 VPS13BQ7Z7G8 4022 aa10.84□□□□□ -0.67
SMC4-211ENST00000469858 RYR3Q15413 4870 aa10.83□□□□□ -0.68
SMC4-211ENST00000469858 SMR3BP02814 79 aaPredicted RBP10.83□□□□□ -0.68
SMC4-211ENST00000469858 A0A087WSZ3 146 aa10.83□□□□□ -0.68
SMC4-211ENST00000469858 RPL37AP61513 92 aaKnown RBP10.83□□□□□ -0.68
SMC4-211ENST00000469858 PCP4P48539 62 aa10.82□□□□□ -0.68
SMC4-211ENST00000469858 HIST1H4AP62805 103 aaKnown RBP10.81□□□□□ -0.68
SMC4-211ENST00000469858 CXCL6P80162 114 aa10.8□□□□□ -0.68
SMC4-211ENST00000469858 APOBP04114 4563 aaKnown RBP10.79□□□□□ -0.68
SMC4-211ENST00000469858 A0A087WVE0 104 aa10.79□□□□□ -0.68
SMC4-211ENST00000469858 FAM236AA0A1B0GUQ0 79 aa10.77□□□□□ -0.69
SMC4-211ENST00000469858 FAM236BA0A1B0GV22 79 aa10.77□□□□□ -0.69
SMC4-211ENST00000469858 BPY2O14599 106 aa10.77□□□□□ -0.69
SMC4-211ENST00000469858 HRCT1Q6UXD1 115 aa10.76□□□□□ -0.69
SMC4-211ENST00000469858 A0A087X002 238 aa10.74□□□□□ -0.69
SMC4-211ENST00000469858 KRTAP1-4P0C5Y4 121 aa10.72□□□□□ -0.69
SMC4-211ENST00000469858 Q8N9L7 120 aa10.72□□□□□ -0.69
SMC4-211ENST00000469858 SPINK6Q6UWN8 80 aa10.71□□□□□ -0.69
SMC4-211ENST00000469858 FAM229BQ4G0N7 80 aa10.7□□□□□ -0.7
SMC4-211ENST00000469858 DEFB116Q30KQ4 102 aa10.7□□□□□ -0.7
SMC4-211ENST00000469858 KRTAP13-2Q52LG2 175 aa10.69□□□□□ -0.7
SMC4-211ENST00000469858 SSBP3-AS1Q7Z2R9 100 aa10.68□□□□□ -0.7
SMC4-211ENST00000469858 PLA2G1BP04054 148 aaKnown RBP10.66□□□□□ -0.7
SMC4-211ENST00000469858 IGKV4-1P06312 121 aa10.66□□□□□ -0.7
SMC4-211ENST00000469858 KRTAP10-4P60372 401 aaPredicted RBP10.66□□□□□ -0.7
SMC4-211ENST00000469858 ANAPC13Q9BS18 74 aa10.66□□□□□ -0.7
SMC4-211ENST00000469858 DSCR10P59022 87 aa10.66□□□□□ -0.7
SMC4-211ENST00000469858 FAT1Q14517 4588 aa10.65□□□□□ -0.71
SMC4-211ENST00000469858 LINC00472Q9H8W2 130 aa10.63□□□□□ -0.71
SMC4-211ENST00000469858 SS18L2Q9UHA2 77 aa10.63□□□□□ -0.71
SMC4-211ENST00000469858 K7EQZ3 153 aa10.62□□□□□ -0.71
SMC4-211ENST00000469858 CD164Q04900 197 aa10.61□□□□□ -0.71
SMC4-211ENST00000469858 CDK2AP2O75956 126 aa10.59□□□□□ -0.71
SMC4-211ENST00000469858 ATOX1O00244 68 aa10.59□□□□□ -0.71
SMC4-211ENST00000469858 Q96NJ1 140 aa10.58□□□□□ -0.72
SMC4-211ENST00000469858 FAM229AH3BQW9 127 aa10.57□□□□□ -0.72
SMC4-211ENST00000469858 TYMSOSQ8TAI1 123 aa10.57□□□□□ -0.72
SMC4-211ENST00000469858 PRR26Q8N8Z3 221 aa10.56□□□□□ -0.72
SMC4-211ENST00000469858 J3KT08 172 aa10.54□□□□□ -0.72
SMC4-211ENST00000469858 A8MWP4 228 aa10.53□□□□□ -0.72
SMC4-211ENST00000469858 HSPG2P98160 4391 aa10.53□□□□□ -0.72
SMC4-211ENST00000469858 Q5VSD8 79 aa10.52□□□□□ -0.72
SMC4-211ENST00000469858 PRR15Q8IV56 129 aa10.5□□□□□ -0.73
SMC4-211ENST00000469858 C4orf48Q5BLP8 95 aa10.48□□□□□ -0.73
SMC4-211ENST00000469858 RYR1P21817 5038 aa10.48□□□□□ -0.73
SMC4-211ENST00000469858 HCG22E2RYF7 251 aa10.47□□□□□ -0.73
SMC4-211ENST00000469858 NDUFB1O75438 58 aa10.47□□□□□ -0.73
SMC4-211ENST00000469858 EPPK1P58107 5090 aaKnown RBP10.45□□□□□ -0.74
SMC4-211ENST00000469858 ASB16-AS1Q495Z4 193 aa10.45□□□□□ -0.74
SMC4-211ENST00000469858 SERP2Q8N6R1 65 aa10.45□□□□□ -0.74
SMC4-211ENST00000469858 CCDC179H3BU77 68 aa10.45□□□□□ -0.74
SMC4-211ENST00000469858 WFDC13Q8IUB5 93 aa10.45□□□□□ -0.74
SMC4-211ENST00000469858 Q5XG85 94 aa10.44□□□□□ -0.74
SMC4-211ENST00000469858 LINC00304Q8N9R0 145 aa10.44□□□□□ -0.74
SMC4-211ENST00000469858 LIMD2Q9BT23 127 aa10.44□□□□□ -0.74
SMC4-211ENST00000469858 PKHD1L1Q86WI1 4243 aa10.44□□□□□ -0.74
SMC4-211ENST00000469858 COX7CP15954 63 aa10.43□□□□□ -0.74
SMC4-211ENST00000469858 SPINK1P00995 79 aa10.43□□□□□ -0.74
SMC4-211ENST00000469858 SMIM20Q8N5G0 67 aa10.41□□□□□ -0.74
SMC4-211ENST00000469858 KRTAP17-1Q9BYP8 105 aa10.41□□□□□ -0.74
SMC4-211ENST00000469858 A0A1B0GVX0 72 aa10.41□□□□□ -0.74
SMC4-211ENST00000469858 KIAA1109Q2LD37 5005 aa10.41□□□□□ -0.74
SMC4-211ENST00000469858 TRAV7A0A075B6U4 112 aa10.4□□□□□ -0.74
SMC4-211ENST00000469858 IGHV6-1A0A0B4J1U7 121 aa10.4□□□□□ -0.74
SMC4-211ENST00000469858 UQCRQO14949 82 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms