RNA–Protein interactions for RNA: ENST00000464053.1

GYPC-205, Transcript of glycophorin C (Gerbich blood group), humanhuman

TSL 1 (best)

Gene GYPC, Length 1,805 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-205ENST00000464053 FAT1Q14517 4588 aa9.31□□□□□ -0.92
GYPC-205ENST00000464053 RBM3P98179 157 aaKnown RBP9.3□□□□□ -0.92
GYPC-205ENST00000464053 ANAPC11Q9NYG5 84 aa9.29□□□□□ -0.92
GYPC-205ENST00000464053 RYR1P21817 5038 aa9.28□□□□□ -0.92
GYPC-205ENST00000464053 CDK2AP2O75956 126 aa9.27□□□□□ -0.93
GYPC-205ENST00000464053 KRTAP10-4P60372 401 aaPredicted RBP9.27□□□□□ -0.93
GYPC-205ENST00000464053 LINC00483Q53H64 154 aa9.27□□□□□ -0.93
GYPC-205ENST00000464053 ZNF706Q9Y5V0 76 aaPredicted RBP9.27□□□□□ -0.93
GYPC-205ENST00000464053 HSPG2P98160 4391 aa9.26□□□□□ -0.93
GYPC-205ENST00000464053 TRBV7-4A0A0J9YYF1 115 aa9.25□□□□□ -0.93
GYPC-205ENST00000464053 K7ERU9 68 aa9.24□□□□□ -0.93
GYPC-205ENST00000464053 Q6ZQT0 140 aa9.24□□□□□ -0.93
GYPC-205ENST00000464053 DSCR8Q96T75 97 aa9.24□□□□□ -0.93
GYPC-205ENST00000464053 LOC110117498A0A087WWA1 95 aa9.24□□□□□ -0.93
GYPC-205ENST00000464053 KIAA1109Q2LD37 5005 aa9.23□□□□□ -0.93
GYPC-205ENST00000464053 A0A0G2JQZ4 141 aa9.23□□□□□ -0.93
GYPC-205ENST00000464053 F8WEM9 126 aa9.23□□□□□ -0.93
GYPC-205ENST00000464053 J3QR89 54 aa9.23□□□□□ -0.93
GYPC-205ENST00000464053 CCKP06307 115 aa9.21□□□□□ -0.93
GYPC-205ENST00000464053 IGLV8-61A0A075B6I0 122 aa9.21□□□□□ -0.94
GYPC-205ENST00000464053 IGLV9-49A0A0B4J1Y8 123 aa9.21□□□□□ -0.94
GYPC-205ENST00000464053 KRTAP17-1Q9BYP8 105 aa9.21□□□□□ -0.94
GYPC-205ENST00000464053 SPINK6Q6UWN8 80 aa9.19□□□□□ -0.94
GYPC-205ENST00000464053 KRTAP1-4P0C5Y4 121 aa9.19□□□□□ -0.94
GYPC-205ENST00000464053 IGFL1Q6UW32 110 aa9.19□□□□□ -0.94
GYPC-205ENST00000464053 VPS25Q9BRG1 176 aa9.18□□□□□ -0.94
GYPC-205ENST00000464053 FAM229AH3BQW9 127 aa9.17□□□□□ -0.94
GYPC-205ENST00000464053 PDE6GP18545 87 aa9.17□□□□□ -0.94
GYPC-205ENST00000464053 C9orf153Q5TBE3 101 aa9.17□□□□□ -0.94
GYPC-205ENST00000464053 A0A1W2PNM2 257 aa9.16□□□□□ -0.94
GYPC-205ENST00000464053 Q5VSD8 79 aa9.16□□□□□ -0.94
GYPC-205ENST00000464053 A0A087X002 238 aa9.15□□□□□ -0.94
GYPC-205ENST00000464053 PLA2G1BP04054 148 aaKnown RBP9.15□□□□□ -0.94
GYPC-205ENST00000464053 MOBPQ13875 183 aa9.15□□□□□ -0.94
GYPC-205ENST00000464053 FAM240AA0A1B0GVK7 77 aa9.15□□□□□ -0.95
GYPC-205ENST00000464053 PKHD1L1Q86WI1 4243 aa9.14□□□□□ -0.95
GYPC-205ENST00000464053 KRTAP13-2Q52LG2 175 aa9.12□□□□□ -0.95
GYPC-205ENST00000464053 Q6JHZ5 121 aa9.12□□□□□ -0.95
GYPC-205ENST00000464053 Q8NBF4 154 aa9.12□□□□□ -0.95
GYPC-205ENST00000464053 CDIP1Q9H305 208 aa9.12□□□□□ -0.95
GYPC-205ENST00000464053 LINC00846Q9NV44 126 aa9.12□□□□□ -0.95
GYPC-205ENST00000464053 ACYP1P07311 99 aa9.12□□□□□ -0.95
GYPC-205ENST00000464053 FAM229BQ4G0N7 80 aa9.12□□□□□ -0.95
GYPC-205ENST00000464053 CRYGAP11844 174 aa9.08□□□□□ -0.96
GYPC-205ENST00000464053 Q8N1X5 172 aa9.08□□□□□ -0.96
GYPC-205ENST00000464053 C21orf62-AS1Q17RA5 79 aa9.07□□□□□ -0.96
GYPC-205ENST00000464053 HRCT1Q6UXD1 115 aa9.06□□□□□ -0.96
GYPC-205ENST00000464053 Q6Q795 121 aa9.05□□□□□ -0.96
GYPC-205ENST00000464053 SSBP3-AS1Q7Z2R9 100 aa9.05□□□□□ -0.96
GYPC-205ENST00000464053 PRR26Q8N8Z3 221 aa9.05□□□□□ -0.96
GYPC-205ENST00000464053 BIRC6Q9NR09 4857 aa9.03□□□□□ -0.96
GYPC-205ENST00000464053 A0A087WSZ3 146 aa9.03□□□□□ -0.96
GYPC-205ENST00000464053 A0A1B0GW54 56 aa9.01□□□□□ -0.97
GYPC-205ENST00000464053 Q6ZVQ6 151 aa9.01□□□□□ -0.97
GYPC-205ENST00000464053 TRBV7-7A0A0K0K1E9 115 aa9.01□□□□□ -0.97
GYPC-205ENST00000464053 TYMSOSQ8TAI1 123 aa9.01□□□□□ -0.97
GYPC-205ENST00000464053 UBL5Q9BZL1 73 aa9.01□□□□□ -0.97
GYPC-205ENST00000464053 NREPQ16612 68 aa8.98□□□□□ -0.97
GYPC-205ENST00000464053 LRP1Q07954 4544 aaKnown RBP8.97□□□□□ -0.97
GYPC-205ENST00000464053 MT-ATP8P03928 68 aa8.97□□□□□ -0.97
GYPC-205ENST00000464053 LINC00643Q86TS7 51 aa8.97□□□□□ -0.97
GYPC-205ENST00000464053 KRTAP4-5Q9BYR2 181 aa8.96□□□□□ -0.97
GYPC-205ENST00000464053 CD164Q04900 197 aa8.95□□□□□ -0.98
GYPC-205ENST00000464053 IGKV3D-7A0A0C4DH55 119 aa8.94□□□□□ -0.98
GYPC-205ENST00000464053 FAT3Q8TDW7 4589 aa8.93□□□□□ -0.98
GYPC-205ENST00000464053 FLG2Q5D862 2391 aaPredicted RBP8.93□□□□□ -0.98
GYPC-205ENST00000464053 DEFB116Q30KQ4 102 aa8.92□□□□□ -0.98
GYPC-205ENST00000464053 SIGMAR1Q99720 223 aa8.91□□□□□ -0.98
GYPC-205ENST00000464053 LINC00304Q8N9R0 145 aa8.9□□□□□ -0.98
GYPC-205ENST00000464053 HERC2O95714 4834 aa8.9□□□□□ -0.98
GYPC-205ENST00000464053 LINC00472Q9H8W2 130 aa8.89□□□□□ -0.99
GYPC-205ENST00000464053 TNXBP22105 4242 aa8.89□□□□□ -0.99
GYPC-205ENST00000464053 MYCBP2O75592 4640 aa8.89□□□□□ -0.99
GYPC-205ENST00000464053 KRTAP10-8P60410 259 aa8.88□□□□□ -0.99
GYPC-205ENST00000464053 C4orf48Q5BLP8 95 aa8.88□□□□□ -0.99
GYPC-205ENST00000464053 Q96NJ1 140 aa8.88□□□□□ -0.99
GYPC-205ENST00000464053 SS18L2Q9UHA2 77 aa8.88□□□□□ -0.99
GYPC-205ENST00000464053 BPY2O14599 106 aa8.87□□□□□ -0.99
GYPC-205ENST00000464053 ATP5EP2Q5VTU8 51 aa8.87□□□□□ -0.99
GYPC-205ENST00000464053 CXCL6P80162 114 aa8.86□□□□□ -0.99
GYPC-205ENST00000464053 SPINK1P00995 79 aa8.85□□□□□ -0.99
GYPC-205ENST00000464053 ABCA13Q86UQ4 5058 aa8.85□□□□□ -0.99
GYPC-205ENST00000464053 DSCR10P59022 87 aa8.84□□□□□ -0.99
GYPC-205ENST00000464053 Q8N9L7 120 aa8.84□□□□□ -0.99
GYPC-205ENST00000464053 PCP4P48539 62 aa8.84□□□□□ -0.99
GYPC-205ENST00000464053 Q5XG85 94 aa8.84□□□□□ -0.99
GYPC-205ENST00000464053 SPAG11AQ6PDA7 123 aa8.83□□□□□ -1
GYPC-205ENST00000464053 ASB16-AS1Q495Z4 193 aa8.82□□□□□ -1
GYPC-205ENST00000464053 HIST1H4AP62805 103 aaKnown RBP8.81□□□□□ -1
GYPC-205ENST00000464053 LIMD2Q9BT23 127 aa8.81□□□□□ -1
GYPC-205ENST00000464053 A0A087WVE0 104 aa8.8□□□□□ -1
GYPC-205ENST00000464053 IGKV4-1P06312 121 aa8.8□□□□□ -1
GYPC-205ENST00000464053 MT1HL1P0DM35 61 aa8.8□□□□□ -1
GYPC-205ENST00000464053 K7EQZ3 153 aa8.79□□□□□ -1
GYPC-205ENST00000464053 RPS29P62273 56 aaKnown RBP8.79□□□□□ -1
GYPC-205ENST00000464053 C1orf195Q5TG92 126 aa8.79□□□□□ -1
GYPC-205ENST00000464053 IMUPQ9GZP8 106 aa8.79□□□□□ -1
GYPC-205ENST00000464053 J3KT08 172 aa8.77□□□□□ -1.01
GYPC-205ENST00000464053 A8MWP4 228 aa8.75□□□□□ -1.01
GYPC-205ENST00000464053 OXTP01178 125 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 134.1 ms