RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 A0A0D9SG42 100 aa9.6□□□□□ -0.87
SMC4-204ENST00000462787 FLNAP21333 2647 aaKnown RBP9.59□□□□□ -0.87
SMC4-204ENST00000462787 LAMA2P24043 3122 aaKnown RBP9.56□□□□□ -0.88
SMC4-204ENST00000462787 USP24Q9UPU5 2620 aa9.54□□□□□ -0.88
SMC4-204ENST00000462787 PLAC8Q9NZF1 115 aa9.52□□□□□ -0.89
SMC4-204ENST00000462787 SPATA8Q6RVD6 105 aa9.51□□□□□ -0.89
SMC4-204ENST00000462787 WWC2-AS2Q96NR7 200 aa9.51□□□□□ -0.89
SMC4-204ENST00000462787 MKI67P46013 3256 aaKnown RBP9.5□□□□□ -0.89
SMC4-204ENST00000462787 LINC00483Q53H64 154 aa9.48□□□□□ -0.89
SMC4-204ENST00000462787 ITPR3Q14573 2671 aa9.47□□□□□ -0.89
SMC4-204ENST00000462787 ATRQ13535 2644 aa9.44□□□□□ -0.9
SMC4-204ENST00000462787 RANBP2P49792 3224 aaKnown RBP9.44□□□□□ -0.9
SMC4-204ENST00000462787 MGAQ8IWI9 3026 aa9.42□□□□□ -0.9
SMC4-204ENST00000462787 LUZP6Q538Z0 58 aa9.42□□□□□ -0.9
SMC4-204ENST00000462787 A8MU10 97 aa9.41□□□□□ -0.9
SMC4-204ENST00000462787 HECTD1Q9ULT8 2610 aa9.4□□□□□ -0.9
SMC4-204ENST00000462787 CHD6Q8TD26 2715 aa9.39□□□□□ -0.91
SMC4-204ENST00000462787 KRTAP1-5Q9BYS1 174 aa9.39□□□□□ -0.91
SMC4-204ENST00000462787 MGAM2Q2M2H8 2515 aa9.38□□□□□ -0.91
SMC4-204ENST00000462787 GCN1Q92616 2671 aaKnown RBP9.38□□□□□ -0.91
SMC4-204ENST00000462787 TRIOO75962 3097 aa9.37□□□□□ -0.91
SMC4-204ENST00000462787 AKAP13Q12802 2813 aa9.37□□□□□ -0.91
SMC4-204ENST00000462787 ROMO1P60602 79 aa9.36□□□□□ -0.91
SMC4-204ENST00000462787 UNC79Q9P2D8 2635 aa9.35□□□□□ -0.91
SMC4-204ENST00000462787 H1FX-AS1Q4G0G2 97 aa9.34□□□□□ -0.91
SMC4-204ENST00000462787 A0A087X002 238 aa9.33□□□□□ -0.92
SMC4-204ENST00000462787 FRYQ5TBA9 3013 aa9.32□□□□□ -0.92
SMC4-204ENST00000462787 RPL37P61927 97 aaKnown RBP9.32□□□□□ -0.92
SMC4-204ENST00000462787 CENPEQ02224 2701 aa9.31□□□□□ -0.92
SMC4-204ENST00000462787 SMR3BP02814 79 aaPredicted RBP9.3□□□□□ -0.92
SMC4-204ENST00000462787 MAST4O15021 2626 aa9.3□□□□□ -0.92
SMC4-204ENST00000462787 KRTAP7-1Q8IUC3 87 aa9.29□□□□□ -0.92
SMC4-204ENST00000462787 LAMA3Q16787 3333 aa9.29□□□□□ -0.92
SMC4-204ENST00000462787 NOTCH2NLQ7Z3S9 236 aa9.28□□□□□ -0.92
SMC4-204ENST00000462787 NBEAQ8NFP9 2946 aa9.27□□□□□ -0.92
SMC4-204ENST00000462787 DSPP15924 2871 aaKnown RBP9.27□□□□□ -0.93
SMC4-204ENST00000462787 ADM2Q7Z4H4 148 aa9.26□□□□□ -0.93
SMC4-204ENST00000462787 ZNF292O60281 2723 aa9.25□□□□□ -0.93
SMC4-204ENST00000462787 KRTAP25-1Q3LHN0 102 aa9.25□□□□□ -0.93
SMC4-204ENST00000462787 VPS13AQ96RL7 3174 aa9.24□□□□□ -0.93
SMC4-204ENST00000462787 WDFY4Q6ZS81 3184 aa9.24□□□□□ -0.93
SMC4-204ENST00000462787 UNC80Q8N2C7 3258 aa9.23□□□□□ -0.93
SMC4-204ENST00000462787 BRCA2P51587 3418 aa9.23□□□□□ -0.93
SMC4-204ENST00000462787 NBEAL2Q6ZNJ1 2754 aa9.21□□□□□ -0.93
SMC4-204ENST00000462787 S4R3F8 94 aa9.21□□□□□ -0.94
SMC4-204ENST00000462787 PANO1I0J062 215 aa9.2□□□□□ -0.94
SMC4-204ENST00000462787 KRTAP11-1Q8IUC1 163 aa9.19□□□□□ -0.94
SMC4-204ENST00000462787 A0A0A0MQY5 61 aa9.18□□□□□ -0.94
SMC4-204ENST00000462787 CFAP46Q8IYW2 2715 aa9.15□□□□□ -0.94
SMC4-204ENST00000462787 KALRNO60229 2985 aa9.14□□□□□ -0.95
SMC4-204ENST00000462787 SETXQ7Z333 2677 aaKnown RBP9.12□□□□□ -0.95
SMC4-204ENST00000462787 KRTAP13-1Q8IUC0 172 aa9.12□□□□□ -0.95
SMC4-204ENST00000462787 NBEAL1Q6ZS30 2694 aa9.12□□□□□ -0.95
SMC4-204ENST00000462787 COX6B2Q6YFQ2 88 aa9.11□□□□□ -0.95
SMC4-204ENST00000462787 FREM2Q5SZK8 3169 aa9.1□□□□□ -0.95
SMC4-204ENST00000462787 Q6ZSA8 131 aa9.07□□□□□ -0.96
SMC4-204ENST00000462787 CAMK2N1Q7Z7J9 78 aa9.07□□□□□ -0.96
SMC4-204ENST00000462787 HELZ2Q9BYK8 2649 aaKnown RBP9.06□□□□□ -0.96
SMC4-204ENST00000462787 MAP1AP78559 2803 aaPredicted RBP9.05□□□□□ -0.96
SMC4-204ENST00000462787 KRTAP16-1A8MUX0 517 aa9.04□□□□□ -0.96
SMC4-204ENST00000462787 XIRP2A4UGR9 3374 aa9.04□□□□□ -0.96
SMC4-204ENST00000462787 PRUNE2Q8WUY3 3088 aa9.03□□□□□ -0.96
SMC4-204ENST00000462787 ITPR1Q14643 2758 aa9.02□□□□□ -0.96
SMC4-204ENST00000462787 CELSR3Q9NYQ7 3312 aa9.02□□□□□ -0.97
SMC4-204ENST00000462787 TEX15Q9BXT5 2789 aa9.02□□□□□ -0.97
SMC4-204ENST00000462787 LAMA1P25391 3075 aa9.02□□□□□ -0.97
SMC4-204ENST00000462787 NOTCH1P46531 2555 aa9.01□□□□□ -0.97
SMC4-204ENST00000462787 DNAH14Q0VDD8 3507 aa9.01□□□□□ -0.97
SMC4-204ENST00000462787 CDH23Q9H251 3354 aa8.98□□□□□ -0.97
SMC4-204ENST00000462787 R4GN34 69 aa8.96□□□□□ -0.98
SMC4-204ENST00000462787 VCANP13611 3396 aa8.96□□□□□ -0.98
SMC4-204ENST00000462787 KRTAP10-1P60331 282 aa8.95□□□□□ -0.98
SMC4-204ENST00000462787 Q6ZRN7 208 aaPredicted RBP8.95□□□□□ -0.98
SMC4-204ENST00000462787 TEP1Q99973 2627 aaKnown RBP8.93□□□□□ -0.98
SMC4-204ENST00000462787 KRTAP10-2P60368 255 aa8.93□□□□□ -0.98
SMC4-204ENST00000462787 ADGRG4Q8IZF6 3080 aa8.92□□□□□ -0.98
SMC4-204ENST00000462787 RPS29P62273 56 aaKnown RBP8.92□□□□□ -0.98
SMC4-204ENST00000462787 J3QL48 77 aa8.92□□□□□ -0.98
SMC4-204ENST00000462787 DMBT1Q9UGM3 2413 aaPredicted RBP8.91□□□□□ -0.98
SMC4-204ENST00000462787 COL6A5A8TX70 2615 aa8.89□□□□□ -0.99
SMC4-204ENST00000462787 BAHCC1Q9P281 2608 aa8.88□□□□□ -0.99
SMC4-204ENST00000462787 A8MUU9 505 aa8.88□□□□□ -0.99
SMC4-204ENST00000462787 NDUFAF8A1L188 74 aa8.87□□□□□ -0.99
SMC4-204ENST00000462787 STAB1Q9NY15 2570 aa8.87□□□□□ -0.99
SMC4-204ENST00000462787 LRBAP50851 2863 aa8.85□□□□□ -0.99
SMC4-204ENST00000462787 KRTAP13-2Q52LG2 175 aa8.85□□□□□ -0.99
SMC4-204ENST00000462787 UBR5O95071 2799 aaPredicted RBP8.84□□□□□ -0.99
SMC4-204ENST00000462787 FRYLO94915 3013 aa8.84□□□□□ -0.99
SMC4-204ENST00000462787 ZZEF1O43149 2961 aa8.84□□□□□ -1
SMC4-204ENST00000462787 M0QZ58 72 aa8.83□□□□□ -1
SMC4-204ENST00000462787 IGSF10Q6WRI0 2623 aa8.81□□□□□ -1
SMC4-204ENST00000462787 TACC2O95359 2948 aa8.79□□□□□ -1
SMC4-204ENST00000462787 ATMQ13315 3056 aa8.76□□□□□ -1.01
SMC4-204ENST00000462787 APCP25054 2843 aa8.75□□□□□ -1.01
SMC4-204ENST00000462787 SZT2Q5T011 3432 aa8.75□□□□□ -1.01
SMC4-204ENST00000462787 BOD1L1Q8NFC6 3051 aa8.73□□□□□ -1.01
SMC4-204ENST00000462787 ASH1LQ9NR48 2969 aaKnown RBP8.73□□□□□ -1.01
SMC4-204ENST00000462787 STAB2Q8WWQ8 2551 aa8.71□□□□□ -1.02
SMC4-204ENST00000462787 NSD1Q96L73 2696 aaPredicted RBP8.7□□□□□ -1.02
SMC4-204ENST00000462787 FLG2Q5D862 2391 aaPredicted RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 134.1 ms