RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 NBEAL2Q6ZNJ1 2754 aa2.95□□□□□ -1.94
HMGB3P9-201ENST00000441799 COL27A1Q8IZC6 1860 aaPredicted RBP2.95□□□□□ -1.94
HMGB3P9-201ENST00000441799 SVILO95425 2214 aa2.95□□□□□ -1.94
HMGB3P9-201ENST00000441799 H0Y9P7 68 aa2.95□□□□□ -1.94
HMGB3P9-201ENST00000441799 IGHV3-53P01767 116 aa2.95□□□□□ -1.94
HMGB3P9-201ENST00000441799 SPATA8Q6RVD6 105 aa2.95□□□□□ -1.94
HMGB3P9-201ENST00000441799 Q8NBF4 154 aa2.95□□□□□ -1.94
HMGB3P9-201ENST00000441799 SPRR4Q96PI1 79 aa2.95□□□□□ -1.94
HMGB3P9-201ENST00000441799 WFDC10AQ9H1F0 79 aa2.95□□□□□ -1.94
HMGB3P9-201ENST00000441799 ANK3Q12955 4377 aaKnown RBP2.95□□□□□ -1.94
HMGB3P9-201ENST00000441799 ARFGEF3Q5TH69 2177 aa2.95□□□□□ -1.94
HMGB3P9-201ENST00000441799 NDUFAF8A1L188 74 aa2.94□□□□□ -1.94
HMGB3P9-201ENST00000441799 NUPR2A6NF83 97 aa2.94□□□□□ -1.94
HMGB3P9-201ENST00000441799 I3L2K1 104 aa2.94□□□□□ -1.94
HMGB3P9-201ENST00000441799 NCR3O14931 201 aa2.94□□□□□ -1.94
HMGB3P9-201ENST00000441799 CCL18P55774 89 aa2.94□□□□□ -1.94
HMGB3P9-201ENST00000441799 NSD1Q96L73 2696 aaPredicted RBP2.94□□□□□ -1.94
HMGB3P9-201ENST00000441799 TNCP24821 2201 aa2.93□□□□□ -1.94
HMGB3P9-201ENST00000441799 NOTCH1P46531 2555 aa2.93□□□□□ -1.94
HMGB3P9-201ENST00000441799 IGKV3-7A0A075B6H7 116 aa2.93□□□□□ -1.94
HMGB3P9-201ENST00000441799 IGKV2-40A0A087WW87 121 aaPredicted RBP2.93□□□□□ -1.94
HMGB3P9-201ENST00000441799 K7EIM0 57 aa2.93□□□□□ -1.94
HMGB3P9-201ENST00000441799 NDUFA4O00483 81 aa2.93□□□□□ -1.94
HMGB3P9-201ENST00000441799 INSP01308 110 aa2.93□□□□□ -1.94
HMGB3P9-201ENST00000441799 IGKV2D-40P01614 121 aaPredicted RBP2.93□□□□□ -1.94
HMGB3P9-201ENST00000441799 HAMPP81172 84 aa2.93□□□□□ -1.94
HMGB3P9-201ENST00000441799 MINOS1Q5TGZ0 78 aa2.93□□□□□ -1.94
HMGB3P9-201ENST00000441799 KCNQ1DNQ9H478 68 aa2.93□□□□□ -1.94
HMGB3P9-201ENST00000441799 MINOS1-NBL1R4GNA1 71 aa2.93□□□□□ -1.94
HMGB3P9-201ENST00000441799 BIRC6Q9NR09 4857 aa2.93□□□□□ -1.94
HMGB3P9-201ENST00000441799 CADP27708 2225 aa2.93□□□□□ -1.94
HMGB3P9-201ENST00000441799 MED13LQ71F56 2210 aa2.93□□□□□ -1.94
HMGB3P9-201ENST00000441799 TGP01266 2768 aa2.93□□□□□ -1.94
HMGB3P9-201ENST00000441799 PRR14LQ5THK1 2151 aa2.93□□□□□ -1.94
HMGB3P9-201ENST00000441799 IGLV7-46A0A075B6I9 117 aa2.92□□□□□ -1.94
HMGB3P9-201ENST00000441799 IGHV3-64A0A075B6Q5 118 aa2.92□□□□□ -1.94
HMGB3P9-201ENST00000441799 LYNX1G3V0Z9 82 aa2.92□□□□□ -1.94
HMGB3P9-201ENST00000441799 UQCR11O14957 56 aa2.92□□□□□ -1.94
HMGB3P9-201ENST00000441799 MGPP08493 103 aa2.92□□□□□ -1.94
HMGB3P9-201ENST00000441799 LYNX1P0DP58 116 aa2.92□□□□□ -1.94
HMGB3P9-201ENST00000441799 NDPQ00604 133 aa2.92□□□□□ -1.94
HMGB3P9-201ENST00000441799 C9orf163Q8N9P6 203 aa2.92□□□□□ -1.94
HMGB3P9-201ENST00000441799 LINC00308Q8TCZ7 52 aa2.92□□□□□ -1.94
HMGB3P9-201ENST00000441799 FLNAP21333 2647 aaKnown RBP2.92□□□□□ -1.94
HMGB3P9-201ENST00000441799 CSPG4Q6UVK1 2322 aa2.92□□□□□ -1.94
HMGB3P9-201ENST00000441799 PLCE1Q9P212 2302 aa2.92□□□□□ -1.94
HMGB3P9-201ENST00000441799 ETDCA0A1B0GVM5 59 aa2.91□□□□□ -1.94
HMGB3P9-201ENST00000441799 IGKV2-29A2NJV5 120 aaPredicted RBP2.91□□□□□ -1.94
HMGB3P9-201ENST00000441799 IGKV4-1P06312 121 aa2.91□□□□□ -1.94
HMGB3P9-201ENST00000441799 CRIP1P50238 77 aa2.91□□□□□ -1.94
HMGB3P9-201ENST00000441799 PRB3Q04118 309 aaPredicted RBP2.91□□□□□ -1.94
HMGB3P9-201ENST00000441799 Q5W150 140 aa2.91□□□□□ -1.94
HMGB3P9-201ENST00000441799 ACANP16112 2415 aa2.91□□□□□ -1.94
HMGB3P9-201ENST00000441799 EPPK1P58107 5090 aaKnown RBP2.91□□□□□ -1.94
HMGB3P9-201ENST00000441799 ZGRF1Q86YA3 2104 aa2.9□□□□□ -1.94
HMGB3P9-201ENST00000441799 TRGV4A0A0C4DH28 118 aa2.9□□□□□ -1.95
HMGB3P9-201ENST00000441799 LINC00959A0A1B0GUT2 108 aa2.9□□□□□ -1.95
HMGB3P9-201ENST00000441799 NDUFA1O15239 70 aa2.9□□□□□ -1.95
HMGB3P9-201ENST00000441799 ZNF861PO60384 105 aa2.9□□□□□ -1.95
HMGB3P9-201ENST00000441799 COA5Q86WW8 74 aa2.9□□□□□ -1.95
HMGB3P9-201ENST00000441799 PCLOQ9Y6V0 5065 aa2.89□□□□□ -1.95
HMGB3P9-201ENST00000441799 IGLV4-60A0A075B6I1 120 aa2.89□□□□□ -1.95
HMGB3P9-201ENST00000441799 TRGV2A0A075B6R0 118 aa2.89□□□□□ -1.95
HMGB3P9-201ENST00000441799 CR1P17927 2039 aa2.89□□□□□ -1.95
HMGB3P9-201ENST00000441799 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.89□□□□□ -1.95
HMGB3P9-201ENST00000441799 MALRD1Q5VYJ5 2156 aa2.88□□□□□ -1.95
HMGB3P9-201ENST00000441799 DEFB112Q30KQ8 113 aa2.88□□□□□ -1.95
HMGB3P9-201ENST00000441799 PKDREJQ9NTG1 2253 aa2.88□□□□□ -1.95
HMGB3P9-201ENST00000441799 RYR1P21817 5038 aa2.87□□□□□ -1.95
HMGB3P9-201ENST00000441799 TLN2Q9Y4G6 2542 aa2.87□□□□□ -1.95
HMGB3P9-201ENST00000441799 IGKV3OR2-268A0A0C4DH90 116 aa2.87□□□□□ -1.95
HMGB3P9-201ENST00000441799 C14orf177Q52M58 125 aa2.87□□□□□ -1.95
HMGB3P9-201ENST00000441799 Q6ZTI0 123 aa2.87□□□□□ -1.95
HMGB3P9-201ENST00000441799 USMG5Q96IX5 58 aa2.87□□□□□ -1.95
HMGB3P9-201ENST00000441799 KLK12Q9UKR0 248 aa2.87□□□□□ -1.95
HMGB3P9-201ENST00000441799 SVEP1Q4LDE5 3571 aa2.87□□□□□ -1.95
HMGB3P9-201ENST00000441799 PRKDCP78527 4128 aaKnown RBP2.87□□□□□ -1.95
HMGB3P9-201ENST00000441799 ROS1P08922 2347 aa2.86□□□□□ -1.95
HMGB3P9-201ENST00000441799 A0A1B0GU33 70 aa2.86□□□□□ -1.95
HMGB3P9-201ENST00000441799 H3BUA1 57 aa2.86□□□□□ -1.95
HMGB3P9-201ENST00000441799 HYDINQ4G0P3 5121 aa2.85□□□□□ -1.95
HMGB3P9-201ENST00000441799 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.85□□□□□ -1.95
HMGB3P9-201ENST00000441799 RNASE3P12724 160 aaKnown RBP2.85□□□□□ -1.95
HMGB3P9-201ENST00000441799 KRTAP7-1Q8IUC3 87 aa2.85□□□□□ -1.95
HMGB3P9-201ENST00000441799 SMR3AQ99954 134 aa2.85□□□□□ -1.95
HMGB3P9-201ENST00000441799 ABCA1O95477 2261 aa2.85□□□□□ -1.95
HMGB3P9-201ENST00000441799 TRBV6-4A0A1B0GX49 114 aa2.84□□□□□ -1.95
HMGB3P9-201ENST00000441799 G3V318 75 aa2.84□□□□□ -1.95
HMGB3P9-201ENST00000441799 IGLV7-43P04211 117 aa2.84□□□□□ -1.95
HMGB3P9-201ENST00000441799 C5orf56Q8N8D9 126 aa2.84□□□□□ -1.95
HMGB3P9-201ENST00000441799 SMIM11BQ8TCY0 68 aa2.84□□□□□ -1.95
HMGB3P9-201ENST00000441799 C16orf74Q96GX8 76 aa2.84□□□□□ -1.95
HMGB3P9-201ENST00000441799 ZANQ9Y493 2812 aa2.84□□□□□ -1.95
HMGB3P9-201ENST00000441799 TRRAPQ9Y4A5 3859 aa2.83□□□□□ -1.96
HMGB3P9-201ENST00000441799 A0A087WTM6 91 aa2.83□□□□□ -1.96
HMGB3P9-201ENST00000441799 POLR2KP53803 58 aaKnown RBP2.83□□□□□ -1.96
HMGB3P9-201ENST00000441799 LY6EQ16553 131 aa2.83□□□□□ -1.96
HMGB3P9-201ENST00000441799 KLK9Q2XQG4 91 aa2.83□□□□□ -1.96
HMGB3P9-201ENST00000441799 LINC00612Q8N6U2 182 aa2.83□□□□□ -1.96
HMGB3P9-201ENST00000441799 RPL39LQ96EH5 51 aaKnown RBP2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms