RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 CENPEQ02224 2701 aa7.26□□□□□ -1.25
PTCH1-209ENST00000437951 ITPR3Q14573 2671 aa7.26□□□□□ -1.25
PTCH1-209ENST00000437951 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.23□□□□□ -1.25
PTCH1-209ENST00000437951 ANAPC11Q9NYG5 84 aa7.21□□□□□ -1.26
PTCH1-209ENST00000437951 CYSTM1Q9H1C7 97 aa7.21□□□□□ -1.26
PTCH1-209ENST00000437951 KMT2BQ9UMN6 2715 aaPredicted RBP7.19□□□□□ -1.26
PTCH1-209ENST00000437951 Q5W150 140 aa7.19□□□□□ -1.26
PTCH1-209ENST00000437951 KRTAP10-11P60412 298 aa7.19□□□□□ -1.26
PTCH1-209ENST00000437951 H1FX-AS1Q4G0G2 97 aa7.19□□□□□ -1.26
PTCH1-209ENST00000437951 PCNTO95613 3336 aa7.19□□□□□ -1.26
PTCH1-209ENST00000437951 TEX15Q9BXT5 2789 aa7.18□□□□□ -1.26
PTCH1-209ENST00000437951 A0A096LNT2 108 aa7.18□□□□□ -1.26
PTCH1-209ENST00000437951 LINC00472Q9H8W2 130 aa7.16□□□□□ -1.26
PTCH1-209ENST00000437951 R4GN34 69 aa7.15□□□□□ -1.26
PTCH1-209ENST00000437951 A0A087X002 238 aa7.15□□□□□ -1.27
PTCH1-209ENST00000437951 OXTP01178 125 aa7.14□□□□□ -1.27
PTCH1-209ENST00000437951 SPRR1AP35321 89 aa7.14□□□□□ -1.27
PTCH1-209ENST00000437951 SPRR1BP22528 89 aa7.13□□□□□ -1.27
PTCH1-209ENST00000437951 SPATA8Q6RVD6 105 aa7.12□□□□□ -1.27
PTCH1-209ENST00000437951 Q6ZR54 194 aa7.12□□□□□ -1.27
PTCH1-209ENST00000437951 UNC79Q9P2D8 2635 aa7.12□□□□□ -1.27
PTCH1-209ENST00000437951 CHD6Q8TD26 2715 aa7.11□□□□□ -1.27
PTCH1-209ENST00000437951 KRTAP25-1Q3LHN0 102 aa7.09□□□□□ -1.27
PTCH1-209ENST00000437951 COL6A5A8TX70 2615 aa7.09□□□□□ -1.27
PTCH1-209ENST00000437951 A6NN06 94 aa7.08□□□□□ -1.28
PTCH1-209ENST00000437951 SEC61BP60468 96 aaKnown RBP7.07□□□□□ -1.28
PTCH1-209ENST00000437951 BAHCC1Q9P281 2608 aa7.06□□□□□ -1.28
PTCH1-209ENST00000437951 CFAP54Q96N23 3096 aa7.06□□□□□ -1.28
PTCH1-209ENST00000437951 CASC10Q5T4H9 136 aa7.04□□□□□ -1.28
PTCH1-209ENST00000437951 PLAC8Q9NZF1 115 aa7.03□□□□□ -1.28
PTCH1-209ENST00000437951 PLAC4Q8WY50 150 aa7.03□□□□□ -1.28
PTCH1-209ENST00000437951 STAB2Q8WWQ8 2551 aa7.02□□□□□ -1.29
PTCH1-209ENST00000437951 SETXQ7Z333 2677 aaKnown RBP6.99□□□□□ -1.29
PTCH1-209ENST00000437951 KRTAP26-1Q6PEX3 210 aa6.99□□□□□ -1.29
PTCH1-209ENST00000437951 LAMA2P24043 3122 aaKnown RBP6.98□□□□□ -1.29
PTCH1-209ENST00000437951 M0QZ58 72 aa6.97□□□□□ -1.29
PTCH1-209ENST00000437951 NOTCH1P46531 2555 aa6.95□□□□□ -1.3
PTCH1-209ENST00000437951 ITPR2Q14571 2701 aa6.94□□□□□ -1.3
PTCH1-209ENST00000437951 TEP1Q99973 2627 aaKnown RBP6.94□□□□□ -1.3
PTCH1-209ENST00000437951 XIRP2A4UGR9 3374 aa6.92□□□□□ -1.3
PTCH1-209ENST00000437951 KRTAP29-1A8MX34 341 aaPredicted RBP6.91□□□□□ -1.3
PTCH1-209ENST00000437951 KRTAP10-3P60369 221 aa6.9□□□□□ -1.3
PTCH1-209ENST00000437951 NDUFAF8A1L188 74 aa6.9□□□□□ -1.31
PTCH1-209ENST00000437951 PANO1I0J062 215 aa6.89□□□□□ -1.31
PTCH1-209ENST00000437951 ADM2Q7Z4H4 148 aa6.88□□□□□ -1.31
PTCH1-209ENST00000437951 LCE6AA0A183 80 aa6.87□□□□□ -1.31
PTCH1-209ENST00000437951 Q8NDZ9 215 aa6.87□□□□□ -1.31
PTCH1-209ENST00000437951 C20orf166-AS1Q96NR2 134 aa6.86□□□□□ -1.31
PTCH1-209ENST00000437951 Q5VSD8 79 aa6.85□□□□□ -1.31
PTCH1-209ENST00000437951 A0A0C4DFX4 3053 aa6.85□□□□□ -1.31
PTCH1-209ENST00000437951 MKI67P46013 3256 aaKnown RBP6.83□□□□□ -1.32
PTCH1-209ENST00000437951 GCN1Q92616 2671 aaKnown RBP6.81□□□□□ -1.32
PTCH1-209ENST00000437951 CELSR3Q9NYQ7 3312 aa6.78□□□□□ -1.32
PTCH1-209ENST00000437951 RPS29P62273 56 aaKnown RBP6.77□□□□□ -1.33
PTCH1-209ENST00000437951 KRTAP4-16G5E9R7 235 aaPredicted RBP6.76□□□□□ -1.33
PTCH1-209ENST00000437951 REV3LO60673 3130 aa6.75□□□□□ -1.33
PTCH1-209ENST00000437951 APCP25054 2843 aa6.74□□□□□ -1.33
PTCH1-209ENST00000437951 PP632Q6XCG6 107 aa6.73□□□□□ -1.33
PTCH1-209ENST00000437951 ZNF292O60281 2723 aa6.73□□□□□ -1.33
PTCH1-209ENST00000437951 TRIOO75962 3097 aa6.72□□□□□ -1.33
PTCH1-209ENST00000437951 FREM2Q5SZK8 3169 aa6.72□□□□□ -1.33
PTCH1-209ENST00000437951 IGSF10Q6WRI0 2623 aa6.7□□□□□ -1.34
PTCH1-209ENST00000437951 PRUNE2Q8WUY3 3088 aa6.69□□□□□ -1.34
PTCH1-209ENST00000437951 A8MUU9 505 aa6.68□□□□□ -1.34
PTCH1-209ENST00000437951 KRTAP1-3Q8IUG1 177 aa6.68□□□□□ -1.34
PTCH1-209ENST00000437951 MAP1AP78559 2803 aaPredicted RBP6.68□□□□□ -1.34
PTCH1-209ENST00000437951 MGAQ8IWI9 3026 aa6.68□□□□□ -1.34
PTCH1-209ENST00000437951 KRTAP11-1Q8IUC1 163 aa6.68□□□□□ -1.34
PTCH1-209ENST00000437951 VPS13AQ96RL7 3174 aa6.67□□□□□ -1.34
PTCH1-209ENST00000437951 TNP1P09430 55 aa6.64□□□□□ -1.35
PTCH1-209ENST00000437951 CHD7Q9P2D1 2997 aa6.64□□□□□ -1.35
PTCH1-209ENST00000437951 A8MU10 97 aa6.63□□□□□ -1.35
PTCH1-209ENST00000437951 RANBP2P49792 3224 aaKnown RBP6.63□□□□□ -1.35
PTCH1-209ENST00000437951 NSD1Q96L73 2696 aaPredicted RBP6.63□□□□□ -1.35
PTCH1-209ENST00000437951 KRTAP1-1Q07627 177 aa6.62□□□□□ -1.35
PTCH1-209ENST00000437951 C10orf95Q9H7T3 257 aa6.6□□□□□ -1.35
PTCH1-209ENST00000437951 LAMA3Q16787 3333 aa6.6□□□□□ -1.35
PTCH1-209ENST00000437951 NOTCH2NLQ7Z3S9 236 aa6.59□□□□□ -1.35
PTCH1-209ENST00000437951 WDFY4Q6ZS81 3184 aa6.58□□□□□ -1.36
PTCH1-209ENST00000437951 BRCA2P51587 3418 aa6.57□□□□□ -1.36
PTCH1-209ENST00000437951 UNC80Q8N2C7 3258 aa6.56□□□□□ -1.36
PTCH1-209ENST00000437951 DNAH14Q0VDD8 3507 aa6.56□□□□□ -1.36
PTCH1-209ENST00000437951 CRYBG3Q68DQ2 2970 aa6.56□□□□□ -1.36
PTCH1-209ENST00000437951 FRYQ5TBA9 3013 aa6.55□□□□□ -1.36
PTCH1-209ENST00000437951 UTP20O75691 2785 aaKnown RBP6.54□□□□□ -1.36
PTCH1-209ENST00000437951 KRTAP10-1P60331 282 aa6.52□□□□□ -1.37
PTCH1-209ENST00000437951 TRANK1O15050 2925 aa6.51□□□□□ -1.37
PTCH1-209ENST00000437951 NBEAL2Q6ZNJ1 2754 aa6.5□□□□□ -1.37
PTCH1-209ENST00000437951 KRTAP1-5Q9BYS1 174 aa6.5□□□□□ -1.37
PTCH1-209ENST00000437951 KRTAP10-2P60368 255 aa6.47□□□□□ -1.37
PTCH1-209ENST00000437951 KALRNO60229 2985 aa6.46□□□□□ -1.38
PTCH1-209ENST00000437951 CDH23Q9H251 3354 aa6.45□□□□□ -1.38
PTCH1-209ENST00000437951 P0C880 135 aa6.45□□□□□ -1.38
PTCH1-209ENST00000437951 FRYLO94915 3013 aa6.43□□□□□ -1.38
PTCH1-209ENST00000437951 UBR5O95071 2799 aaPredicted RBP6.42□□□□□ -1.38
PTCH1-209ENST00000437951 DSPP15924 2871 aaKnown RBP6.4□□□□□ -1.38
PTCH1-209ENST00000437951 LAMA1P25391 3075 aa6.39□□□□□ -1.39
PTCH1-209ENST00000437951 Q6ZRN7 208 aaPredicted RBP6.38□□□□□ -1.39
PTCH1-209ENST00000437951 HTTP42858 3142 aa6.38□□□□□ -1.39
PTCH1-209ENST00000437951 ASH1LQ9NR48 2969 aaKnown RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms