RNA–Protein interactions for RNA: ENST00000436427.1

YBX1-203, Transcript of Y-box binding protein 1, humanhuman

TSL 1 (best)

Gene YBX1, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-203ENST00000436427 ST20-AS1Q8NBB2 130 aa12.98□□□□□ -0.33
YBX1-203ENST00000436427 Q5VSD8 79 aa12.97□□□□□ -0.33
YBX1-203ENST00000436427 LAMTOR3Q9UHA4 124 aa12.97□□□□□ -0.33
YBX1-203ENST00000436427 KRTAP10-4P60372 401 aaPredicted RBP12.95□□□□□ -0.34
YBX1-203ENST00000436427 DEFB105AQ8NG35 78 aa12.95□□□□□ -0.34
YBX1-203ENST00000436427 SCGB1A1P11684 91 aa12.92□□□□□ -0.34
YBX1-203ENST00000436427 RBM3P98179 157 aaKnown RBP12.92□□□□□ -0.34
YBX1-203ENST00000436427 BIRC6Q9NR09 4857 aa12.91□□□□□ -0.34
YBX1-203ENST00000436427 SRRM2Q9UQ35 2752 aaKnown RBP12.91□□□□□ -0.34
YBX1-203ENST00000436427 Q8N1X5 172 aa12.91□□□□□ -0.34
YBX1-203ENST00000436427 C21orf62-AS1Q17RA5 79 aa12.9□□□□□ -0.34
YBX1-203ENST00000436427 ZNF706Q9Y5V0 76 aaPredicted RBP12.9□□□□□ -0.34
YBX1-203ENST00000436427 A0A1B0GV72 72 aa12.89□□□□□ -0.35
YBX1-203ENST00000436427 MT-ATP8P03928 68 aa12.89□□□□□ -0.35
YBX1-203ENST00000436427 CCKP06307 115 aa12.89□□□□□ -0.35
YBX1-203ENST00000436427 PDE6GP18545 87 aa12.89□□□□□ -0.35
YBX1-203ENST00000436427 SPINK6Q6UWN8 80 aa12.89□□□□□ -0.35
YBX1-203ENST00000436427 SPRR4Q96PI1 79 aa12.88□□□□□ -0.35
YBX1-203ENST00000436427 KRTAP17-1Q9BYP8 105 aa12.88□□□□□ -0.35
YBX1-203ENST00000436427 IGLV5-48A0A075B6I7 105 aa12.88□□□□□ -0.35
YBX1-203ENST00000436427 LINC01547P58512 204 aaPredicted RBP12.88□□□□□ -0.35
YBX1-203ENST00000436427 DSCR8Q96T75 97 aa12.88□□□□□ -0.35
YBX1-203ENST00000436427 LOC110117498A0A087WWA1 95 aa12.86□□□□□ -0.35
YBX1-203ENST00000436427 Q8N377 158 aa12.86□□□□□ -0.35
YBX1-203ENST00000436427 PCP4P48539 62 aa12.85□□□□□ -0.35
YBX1-203ENST00000436427 NDUFV3P56181 108 aaKnown RBP12.84□□□□□ -0.35
YBX1-203ENST00000436427 LINC00643Q86TS7 51 aa12.84□□□□□ -0.35
YBX1-203ENST00000436427 ANAPC11Q9NYG5 84 aa12.82□□□□□ -0.36
YBX1-203ENST00000436427 C3orf22Q8N5N4 141 aa12.81□□□□□ -0.36
YBX1-203ENST00000436427 SPRR1BP22528 89 aa12.8□□□□□ -0.36
YBX1-203ENST00000436427 LINC00483Q53H64 154 aa12.8□□□□□ -0.36
YBX1-203ENST00000436427 Q6ZQT0 140 aa12.8□□□□□ -0.36
YBX1-203ENST00000436427 Q6Q795 121 aa12.78□□□□□ -0.36
YBX1-203ENST00000436427 SMIM29Q86T20 159 aa12.76□□□□□ -0.37
YBX1-203ENST00000436427 TRBV7-4A0A0J9YYF1 115 aa12.75□□□□□ -0.37
YBX1-203ENST00000436427 KRTAP1-4P0C5Y4 121 aa12.75□□□□□ -0.37
YBX1-203ENST00000436427 LINC00846Q9NV44 126 aa12.75□□□□□ -0.37
YBX1-203ENST00000436427 TRBV7-7A0A0K0K1E9 115 aa12.73□□□□□ -0.37
YBX1-203ENST00000436427 F8WEM9 126 aa12.73□□□□□ -0.37
YBX1-203ENST00000436427 IMUPQ9GZP8 106 aa12.73□□□□□ -0.37
YBX1-203ENST00000436427 UBL5Q9BZL1 73 aa12.72□□□□□ -0.37
YBX1-203ENST00000436427 IGLV9-49A0A0B4J1Y8 123 aa12.72□□□□□ -0.37
YBX1-203ENST00000436427 PKHD1L1Q86WI1 4243 aa12.71□□□□□ -0.38
YBX1-203ENST00000436427 FAM229BQ4G0N7 80 aa12.7□□□□□ -0.38
YBX1-203ENST00000436427 Q6JHZ5 121 aa12.7□□□□□ -0.38
YBX1-203ENST00000436427 C9orf153Q5TBE3 101 aa12.69□□□□□ -0.38
YBX1-203ENST00000436427 A0A087X002 238 aa12.68□□□□□ -0.38
YBX1-203ENST00000436427 ATP5EP2Q5VTU8 51 aa12.68□□□□□ -0.38
YBX1-203ENST00000436427 CRYGAP11844 174 aa12.67□□□□□ -0.38
YBX1-203ENST00000436427 KRTAP4-5Q9BYR2 181 aa12.67□□□□□ -0.38
YBX1-203ENST00000436427 HERC2O95714 4834 aa12.66□□□□□ -0.38
YBX1-203ENST00000436427 MOBPQ13875 183 aa12.66□□□□□ -0.38
YBX1-203ENST00000436427 KRTAP13-2Q52LG2 175 aa12.62□□□□□ -0.39
YBX1-203ENST00000436427 PRR26Q8N8Z3 221 aa12.62□□□□□ -0.39
YBX1-203ENST00000436427 Q8NBF4 154 aa12.62□□□□□ -0.39
YBX1-203ENST00000436427 IGLV8-61A0A075B6I0 122 aa12.61□□□□□ -0.39
YBX1-203ENST00000436427 A0A1B0GW54 56 aa12.61□□□□□ -0.39
YBX1-203ENST00000436427 IGKV3D-7A0A0C4DH55 119 aa12.57□□□□□ -0.4
YBX1-203ENST00000436427 A0A0G2JQZ4 141 aa12.57□□□□□ -0.4
YBX1-203ENST00000436427 IGFL1Q6UW32 110 aa12.57□□□□□ -0.4
YBX1-203ENST00000436427 TYMSOSQ8TAI1 123 aa12.57□□□□□ -0.4
YBX1-203ENST00000436427 Q6ZVQ6 151 aa12.56□□□□□ -0.4
YBX1-203ENST00000436427 SSBP3-AS1Q7Z2R9 100 aa12.55□□□□□ -0.4
YBX1-203ENST00000436427 ANAPC13Q9BS18 74 aa12.53□□□□□ -0.4
YBX1-203ENST00000436427 FAM236AA0A1B0GUQ0 79 aa12.5□□□□□ -0.41
YBX1-203ENST00000436427 FAM236BA0A1B0GV22 79 aa12.5□□□□□ -0.41
YBX1-203ENST00000436427 CXCL6P80162 114 aa12.5□□□□□ -0.41
YBX1-203ENST00000436427 LRP1Q07954 4544 aaKnown RBP12.5□□□□□ -0.41
YBX1-203ENST00000436427 ABCA13Q86UQ4 5058 aa12.49□□□□□ -0.41
YBX1-203ENST00000436427 NREPQ16612 68 aa12.49□□□□□ -0.41
YBX1-203ENST00000436427 FLG2Q5D862 2391 aaPredicted RBP12.49□□□□□ -0.41
YBX1-203ENST00000436427 HRCT1Q6UXD1 115 aa12.48□□□□□ -0.41
YBX1-203ENST00000436427 HIST1H4AP62805 103 aaKnown RBP12.47□□□□□ -0.41
YBX1-203ENST00000436427 FAT3Q8TDW7 4589 aa12.46□□□□□ -0.41
YBX1-203ENST00000436427 MYCBP2O75592 4640 aa12.46□□□□□ -0.41
YBX1-203ENST00000436427 A0A1W2PNM2 257 aa12.46□□□□□ -0.42
YBX1-203ENST00000436427 OXTP01178 125 aa12.43□□□□□ -0.42
YBX1-203ENST00000436427 KRTAP10-8P60410 259 aa12.42□□□□□ -0.42
YBX1-203ENST00000436427 C4orf48Q5BLP8 95 aa12.42□□□□□ -0.42
YBX1-203ENST00000436427 LINC00304Q8N9R0 145 aa12.42□□□□□ -0.42
YBX1-203ENST00000436427 ATOX1O00244 68 aa12.4□□□□□ -0.42
YBX1-203ENST00000436427 CD164Q04900 197 aa12.39□□□□□ -0.43
YBX1-203ENST00000436427 A0A087WVE0 104 aa12.37□□□□□ -0.43
YBX1-203ENST00000436427 BPY2O14599 106 aa12.37□□□□□ -0.43
YBX1-203ENST00000436427 TNXBP22105 4242 aa12.36□□□□□ -0.43
YBX1-203ENST00000436427 A0A087WSZ3 146 aa12.36□□□□□ -0.43
YBX1-203ENST00000436427 KRTAP29-1A8MX34 341 aaPredicted RBP12.36□□□□□ -0.43
YBX1-203ENST00000436427 MT1HL1P0DM35 61 aa12.36□□□□□ -0.43
YBX1-203ENST00000436427 SPAG11AQ6PDA7 123 aa12.35□□□□□ -0.43
YBX1-203ENST00000436427 SPINK1P00995 79 aa12.33□□□□□ -0.44
YBX1-203ENST00000436427 LIMD2Q9BT23 127 aa12.28□□□□□ -0.44
YBX1-203ENST00000436427 J3QL48 77 aa12.27□□□□□ -0.44
YBX1-203ENST00000436427 SS18L2Q9UHA2 77 aa12.27□□□□□ -0.44
YBX1-203ENST00000436427 RPS29P62273 56 aaKnown RBP12.25□□□□□ -0.45
YBX1-203ENST00000436427 PCLOQ9Y6V0 5065 aa12.23□□□□□ -0.45
YBX1-203ENST00000436427 IGKV4-1P06312 121 aa12.22□□□□□ -0.45
YBX1-203ENST00000436427 SMIM20Q8N5G0 67 aa12.22□□□□□ -0.45
YBX1-203ENST00000436427 Q5XG85 94 aa12.21□□□□□ -0.45
YBX1-203ENST00000436427 UQCRQO14949 82 aa12.21□□□□□ -0.46
YBX1-203ENST00000436427 SERP2Q8N6R1 65 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms