RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 CNTRLQ7Z7A1 2325 aa1.48□□□□□ -2.17
HMGB1P45-201ENST00000435986 TNCP24821 2201 aa1.47□□□□□ -2.17
HMGB1P45-201ENST00000435986 RELNP78509 3460 aa1.47□□□□□ -2.17
HMGB1P45-201ENST00000435986 DEFB131BA0A096LNP1 70 aa1.47□□□□□ -2.17
HMGB1P45-201ENST00000435986 KALRNO60229 2985 aa1.47□□□□□ -2.17
HMGB1P45-201ENST00000435986 CNFNQ9BYD5 112 aa1.47□□□□□ -2.17
HMGB1P45-201ENST00000435986 AHCTF1Q8WYP5 2266 aa1.47□□□□□ -2.17
HMGB1P45-201ENST00000435986 SMG1Q96Q15 3661 aaKnown RBP1.47□□□□□ -2.17
HMGB1P45-201ENST00000435986 NCOR2Q9Y618 2525 aa1.46□□□□□ -2.18
HMGB1P45-201ENST00000435986 URB1O60287 2271 aaKnown RBP1.46□□□□□ -2.18
HMGB1P45-201ENST00000435986 GVINP1Q7Z2Y8 2422 aa1.46□□□□□ -2.18
HMGB1P45-201ENST00000435986 FAM186AA6NE01 2351 aa1.46□□□□□ -2.18
HMGB1P45-201ENST00000435986 IGIPA6NJ69 53 aa1.46□□□□□ -2.18
HMGB1P45-201ENST00000435986 ATMQ13315 3056 aa1.46□□□□□ -2.18
HMGB1P45-201ENST00000435986 MGAQ8IWI9 3026 aa1.46□□□□□ -2.18
HMGB1P45-201ENST00000435986 CELSR3Q9NYQ7 3312 aa1.46□□□□□ -2.18
HMGB1P45-201ENST00000435986 COL12A1Q99715 3063 aa1.46□□□□□ -2.18
HMGB1P45-201ENST00000435986 ACACBO00763 2458 aa1.45□□□□□ -2.18
HMGB1P45-201ENST00000435986 MAST4O15021 2626 aa1.45□□□□□ -2.18
HMGB1P45-201ENST00000435986 ANKRD17O75179 2603 aaKnown RBP1.45□□□□□ -2.18
HMGB1P45-201ENST00000435986 CEP295Q9C0D2 2601 aa1.45□□□□□ -2.18
HMGB1P45-201ENST00000435986 CEP250Q9BV73 2442 aa1.45□□□□□ -2.18
HMGB1P45-201ENST00000435986 CFAP46Q8IYW2 2715 aa1.45□□□□□ -2.18
HMGB1P45-201ENST00000435986 LOC730098B7Z3J9 87 aa1.45□□□□□ -2.18
HMGB1P45-201ENST00000435986 K7EQZ3 153 aa1.45□□□□□ -2.18
HMGB1P45-201ENST00000435986 MRPL34Q9BQ48 92 aaKnown RBP1.45□□□□□ -2.18
HMGB1P45-201ENST00000435986 ABRACLQ9P1F3 81 aa1.45□□□□□ -2.18
HMGB1P45-201ENST00000435986 RIF1Q5UIP0 2472 aaKnown RBP1.45□□□□□ -2.18
HMGB1P45-201ENST00000435986 PKD1L2Q7Z442 2459 aa1.45□□□□□ -2.18
HMGB1P45-201ENST00000435986 HELZ2Q9BYK8 2649 aaKnown RBP1.45□□□□□ -2.18
HMGB1P45-201ENST00000435986 TEX15Q9BXT5 2789 aa1.45□□□□□ -2.18
HMGB1P45-201ENST00000435986 ZFYVE26Q68DK2 2539 aa1.44□□□□□ -2.18
HMGB1P45-201ENST00000435986 PIEZO2Q9H5I5 2752 aa1.44□□□□□ -2.18
HMGB1P45-201ENST00000435986 CCL22O00626 93 aa1.44□□□□□ -2.18
HMGB1P45-201ENST00000435986 FAM208BQ5VWN6 2430 aa1.44□□□□□ -2.18
HMGB1P45-201ENST00000435986 COL6A6A6NMZ7 2263 aa1.43□□□□□ -2.18
HMGB1P45-201ENST00000435986 MYO18BQ8IUG5 2567 aa1.43□□□□□ -2.18
HMGB1P45-201ENST00000435986 EP300Q09472 2414 aaPredicted RBP1.43□□□□□ -2.18
HMGB1P45-201ENST00000435986 COX6B2Q6YFQ2 88 aa1.43□□□□□ -2.18
HMGB1P45-201ENST00000435986 PRO0255Q9UI72 69 aa1.43□□□□□ -2.18
HMGB1P45-201ENST00000435986 FASNP49327 2511 aaKnown RBP1.43□□□□□ -2.18
HMGB1P45-201ENST00000435986 SPTBN2O15020 2390 aa1.43□□□□□ -2.18
HMGB1P45-201ENST00000435986 CACNA1HO95180 2353 aa1.43□□□□□ -2.18
HMGB1P45-201ENST00000435986 NAV3Q8IVL0 2385 aa1.43□□□□□ -2.18
HMGB1P45-201ENST00000435986 UBR5O95071 2799 aaPredicted RBP1.42□□□□□ -2.18
HMGB1P45-201ENST00000435986 LRBAP50851 2863 aa1.42□□□□□ -2.18
HMGB1P45-201ENST00000435986 CRYBG3Q68DQ2 2970 aa1.42□□□□□ -2.18
HMGB1P45-201ENST00000435986 IGF2RP11717 2491 aa1.42□□□□□ -2.18
HMGB1P45-201ENST00000435986 PTPRZ1P23471 2315 aaPredicted RBP1.42□□□□□ -2.18
HMGB1P45-201ENST00000435986 SMIM27A0A1W2PRY6 76 aa1.42□□□□□ -2.18
HMGB1P45-201ENST00000435986 CRIP1P50238 77 aa1.42□□□□□ -2.18
HMGB1P45-201ENST00000435986 COX6A2Q02221 97 aa1.42□□□□□ -2.18
HMGB1P45-201ENST00000435986 BOD1L1Q8NFC6 3051 aa1.42□□□□□ -2.18
HMGB1P45-201ENST00000435986 FLNCQ14315 2725 aa1.42□□□□□ -2.18
HMGB1P45-201ENST00000435986 FLNBO75369 2602 aaKnown RBP1.41□□□□□ -2.18
HMGB1P45-201ENST00000435986 TEP1Q99973 2627 aaKnown RBP1.41□□□□□ -2.18
HMGB1P45-201ENST00000435986 TPRP12270 2363 aaKnown RBP1.41□□□□□ -2.18
HMGB1P45-201ENST00000435986 NAV2Q8IVL1 2488 aa1.41□□□□□ -2.18
HMGB1P45-201ENST00000435986 Q8IZM0 81 aa1.41□□□□□ -2.18
HMGB1P45-201ENST00000435986 C10orf95Q9H7T3 257 aa1.41□□□□□ -2.18
HMGB1P45-201ENST00000435986 Q9Y3F1 56 aa1.41□□□□□ -2.18
HMGB1P45-201ENST00000435986 UNC79Q9P2D8 2635 aa1.41□□□□□ -2.18
HMGB1P45-201ENST00000435986 JMJD1CQ15652 2540 aa1.4□□□□□ -2.18
HMGB1P45-201ENST00000435986 HECTD1Q9ULT8 2610 aa1.4□□□□□ -2.18
HMGB1P45-201ENST00000435986 CELSR2Q9HCU4 2923 aa1.4□□□□□ -2.18
HMGB1P45-201ENST00000435986 H0YGX0 51 aa1.4□□□□□ -2.19
HMGB1P45-201ENST00000435986 COX6B1P14854 86 aa1.4□□□□□ -2.19
HMGB1P45-201ENST00000435986 CD52P31358 61 aa1.4□□□□□ -2.19
HMGB1P45-201ENST00000435986 CDKN2A-AS1Q9UH64 79 aa1.4□□□□□ -2.19
HMGB1P45-201ENST00000435986 FBN2P35556 2912 aa1.4□□□□□ -2.19
HMGB1P45-201ENST00000435986 CACNA1EQ15878 2313 aa1.4□□□□□ -2.19
HMGB1P45-201ENST00000435986 CELSR1Q9NYQ6 3014 aa1.4□□□□□ -2.19
HMGB1P45-201ENST00000435986 PDZD2O15018 2839 aa1.39□□□□□ -2.19
HMGB1P45-201ENST00000435986 CENPEQ02224 2701 aa1.39□□□□□ -2.19
HMGB1P45-201ENST00000435986 NF1P21359 2839 aa1.39□□□□□ -2.19
HMGB1P45-201ENST00000435986 SPENQ96T58 3664 aaKnown RBP1.38□□□□□ -2.19
HMGB1P45-201ENST00000435986 ITPR2Q14571 2701 aa1.38□□□□□ -2.19
HMGB1P45-201ENST00000435986 NBPF19A0A087WUL8 3843 aa1.38□□□□□ -2.19
HMGB1P45-201ENST00000435986 NDUFA3O95167 84 aa1.38□□□□□ -2.19
HMGB1P45-201ENST00000435986 USP9XQ93008 2570 aaPredicted RBP1.38□□□□□ -2.19
HMGB1P45-201ENST00000435986 CSMD2Q7Z408 3487 aa1.38□□□□□ -2.19
HMGB1P45-201ENST00000435986 CNOT1A5YKK6 2376 aaKnown RBP1.37□□□□□ -2.19
HMGB1P45-201ENST00000435986 ZNF462Q96JM2 2506 aa1.37□□□□□ -2.19
HMGB1P45-201ENST00000435986 LINC01546A6NGU7 62 aa1.37□□□□□ -2.19
HMGB1P45-201ENST00000435986 DEFB124Q8NES8 71 aa1.37□□□□□ -2.19
HMGB1P45-201ENST00000435986 CRCT1Q9UGL9 99 aa1.37□□□□□ -2.19
HMGB1P45-201ENST00000435986 OTOGQ6ZRI0 2925 aa1.37□□□□□ -2.19
HMGB1P45-201ENST00000435986 ROS1P08922 2347 aa1.37□□□□□ -2.19
HMGB1P45-201ENST00000435986 PTPN13Q12923 2485 aa1.37□□□□□ -2.19
HMGB1P45-201ENST00000435986 TACC2O95359 2948 aa1.36□□□□□ -2.19
HMGB1P45-201ENST00000435986 CSMD1Q96PZ7 3565 aa1.36□□□□□ -2.19
HMGB1P45-201ENST00000435986 A0A0D9SG42 100 aa1.36□□□□□ -2.19
HMGB1P45-201ENST00000435986 LINC00158P58513 81 aa1.36□□□□□ -2.19
HMGB1P45-201ENST00000435986 DCHS2Q6V1P9 2916 aa1.36□□□□□ -2.19
HMGB1P45-201ENST00000435986 TIMM8BQ9Y5J9 83 aaPredicted RBP1.36□□□□□ -2.19
HMGB1P45-201ENST00000435986 ITPR3Q14573 2671 aa1.36□□□□□ -2.19
HMGB1P45-201ENST00000435986 ADGRG4Q8IZF6 3080 aa1.35□□□□□ -2.19
HMGB1P45-201ENST00000435986 DOPEY2Q9Y3R5 2298 aa1.35□□□□□ -2.19
HMGB1P45-201ENST00000435986 KRTAP4-1Q9BYQ7 146 aa1.35□□□□□ -2.19
HMGB1P45-201ENST00000435986 FBN3Q75N90 2809 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms