RNA–Protein interactions for RNA: ENST00000431893.3

SEC16A-206, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-206ENST00000431893 CEP295Q9C0D2 2601 aa6.8□□□□□ -1.32
SEC16A-206ENST00000431893 C5orf42Q9H799 3197 aa6.79□□□□□ -1.32
SEC16A-206ENST00000431893 Q5VSD8 79 aa6.79□□□□□ -1.32
SEC16A-206ENST00000431893 KRTAP10-2P60368 255 aa6.76□□□□□ -1.33
SEC16A-206ENST00000431893 Q6ZR54 194 aa6.76□□□□□ -1.33
SEC16A-206ENST00000431893 KRTAP10-1P60331 282 aa6.75□□□□□ -1.33
SEC16A-206ENST00000431893 A8MU10 97 aa6.74□□□□□ -1.33
SEC16A-206ENST00000431893 SPRR1BP22528 89 aa6.73□□□□□ -1.33
SEC16A-206ENST00000431893 FASNP49327 2511 aaKnown RBP6.72□□□□□ -1.33
SEC16A-206ENST00000431893 PANO1I0J062 215 aa6.72□□□□□ -1.33
SEC16A-206ENST00000431893 PLAC4Q8WY50 150 aa6.72□□□□□ -1.33
SEC16A-206ENST00000431893 A0A087X002 238 aa6.71□□□□□ -1.33
SEC16A-206ENST00000431893 NOTCH2NLQ7Z3S9 236 aa6.71□□□□□ -1.33
SEC16A-206ENST00000431893 SEC61BP60468 96 aaKnown RBP6.71□□□□□ -1.34
SEC16A-206ENST00000431893 KRTAP16-1A8MUX0 517 aa6.7□□□□□ -1.34
SEC16A-206ENST00000431893 C20orf166-AS1Q96NR2 134 aa6.69□□□□□ -1.34
SEC16A-206ENST00000431893 CEP350Q5VT06 3117 aa6.65□□□□□ -1.35
SEC16A-206ENST00000431893 KRTAP25-1Q3LHN0 102 aa6.64□□□□□ -1.35
SEC16A-206ENST00000431893 USP24Q9UPU5 2620 aa6.64□□□□□ -1.35
SEC16A-206ENST00000431893 NDUFAF8A1L188 74 aa6.62□□□□□ -1.35
SEC16A-206ENST00000431893 KRTAP29-1A8MX34 341 aaPredicted RBP6.62□□□□□ -1.35
SEC16A-206ENST00000431893 A6NN06 94 aa6.6□□□□□ -1.35
SEC16A-206ENST00000431893 PRRC2CQ9Y520 2896 aaKnown RBP6.6□□□□□ -1.35
SEC16A-206ENST00000431893 PCNTO95613 3336 aa6.58□□□□□ -1.36
SEC16A-206ENST00000431893 EPG5Q9HCE0 2579 aa6.58□□□□□ -1.36
SEC16A-206ENST00000431893 KRTAP11-1Q8IUC1 163 aa6.57□□□□□ -1.36
SEC16A-206ENST00000431893 KRTAP4-16G5E9R7 235 aaPredicted RBP6.57□□□□□ -1.36
SEC16A-206ENST00000431893 A8MUU9 505 aa6.54□□□□□ -1.36
SEC16A-206ENST00000431893 MGAM2Q2M2H8 2515 aa6.52□□□□□ -1.37
SEC16A-206ENST00000431893 CFAP54Q96N23 3096 aa6.51□□□□□ -1.37
SEC16A-206ENST00000431893 ASB16-AS1Q495Z4 193 aa6.51□□□□□ -1.37
SEC16A-206ENST00000431893 C10orf95Q9H7T3 257 aa6.51□□□□□ -1.37
SEC16A-206ENST00000431893 LCE6AA0A183 80 aa6.49□□□□□ -1.37
SEC16A-206ENST00000431893 HECTD1Q9ULT8 2610 aa6.47□□□□□ -1.37
SEC16A-206ENST00000431893 MKI67P46013 3256 aaKnown RBP6.44□□□□□ -1.38
SEC16A-206ENST00000431893 FLNAP21333 2647 aaKnown RBP6.43□□□□□ -1.38
SEC16A-206ENST00000431893 FLNBO75369 2602 aaKnown RBP6.42□□□□□ -1.38
SEC16A-206ENST00000431893 A0A0C4DFX4 3053 aa6.42□□□□□ -1.38
SEC16A-206ENST00000431893 KRTAP7-1Q8IUC3 87 aa6.41□□□□□ -1.38
SEC16A-206ENST00000431893 FLG2Q5D862 2391 aaPredicted RBP6.39□□□□□ -1.39
SEC16A-206ENST00000431893 ITPR3Q14573 2671 aa6.38□□□□□ -1.39
SEC16A-206ENST00000431893 KRTAP13-2Q52LG2 175 aa6.37□□□□□ -1.39
SEC16A-206ENST00000431893 XIRP2A4UGR9 3374 aa6.36□□□□□ -1.39
SEC16A-206ENST00000431893 FREM2Q5SZK8 3169 aa6.34□□□□□ -1.39
SEC16A-206ENST00000431893 CHD7Q9P2D1 2997 aa6.33□□□□□ -1.4
SEC16A-206ENST00000431893 ATRQ13535 2644 aa6.33□□□□□ -1.4
SEC16A-206ENST00000431893 HTTP42858 3142 aa6.32□□□□□ -1.4
SEC16A-206ENST00000431893 TNP1P09430 55 aa6.32□□□□□ -1.4
SEC16A-206ENST00000431893 TRIOO75962 3097 aa6.31□□□□□ -1.4
SEC16A-206ENST00000431893 CELSR3Q9NYQ7 3312 aa6.3□□□□□ -1.4
SEC16A-206ENST00000431893 DMBT1Q9UGM3 2413 aaPredicted RBP6.29□□□□□ -1.4
SEC16A-206ENST00000431893 A0A1B0GVY2 172 aa6.28□□□□□ -1.4
SEC16A-206ENST00000431893 HELZ2Q9BYK8 2649 aaKnown RBP6.28□□□□□ -1.4
SEC16A-206ENST00000431893 Q6ZRN7 208 aaPredicted RBP6.27□□□□□ -1.41
SEC16A-206ENST00000431893 LAMA2P24043 3122 aaKnown RBP6.27□□□□□ -1.41
SEC16A-206ENST00000431893 RANBP2P49792 3224 aaKnown RBP6.26□□□□□ -1.41
SEC16A-206ENST00000431893 CHD6Q8TD26 2715 aa6.26□□□□□ -1.41
SEC16A-206ENST00000431893 LAMA3Q16787 3333 aa6.25□□□□□ -1.41
SEC16A-206ENST00000431893 AKAP13Q12802 2813 aa6.24□□□□□ -1.41
SEC16A-206ENST00000431893 CHD9Q3L8U1 2897 aa6.23□□□□□ -1.41
SEC16A-206ENST00000431893 MAST4O15021 2626 aa6.23□□□□□ -1.41
SEC16A-206ENST00000431893 NBEAL1Q6ZS30 2694 aa6.23□□□□□ -1.41
SEC16A-206ENST00000431893 DNAH14Q0VDD8 3507 aa6.22□□□□□ -1.41
SEC16A-206ENST00000431893 RPS29P62273 56 aaKnown RBP6.22□□□□□ -1.41
SEC16A-206ENST00000431893 KRTAP13-1Q8IUC0 172 aa6.22□□□□□ -1.41
SEC16A-206ENST00000431893 BRCA2P51587 3418 aa6.21□□□□□ -1.41
SEC16A-206ENST00000431893 KRTAP10-8P60410 259 aa6.21□□□□□ -1.42
SEC16A-206ENST00000431893 CFAP46Q8IYW2 2715 aa6.2□□□□□ -1.42
SEC16A-206ENST00000431893 MGAQ8IWI9 3026 aa6.19□□□□□ -1.42
SEC16A-206ENST00000431893 UNC80Q8N2C7 3258 aa6.19□□□□□ -1.42
SEC16A-206ENST00000431893 BAHCC1Q9P281 2608 aa6.16□□□□□ -1.42
SEC16A-206ENST00000431893 GCN1Q92616 2671 aaKnown RBP6.15□□□□□ -1.42
SEC16A-206ENST00000431893 H0YAA0 97 aa6.14□□□□□ -1.43
SEC16A-206ENST00000431893 TEX15Q9BXT5 2789 aa6.12□□□□□ -1.43
SEC16A-206ENST00000431893 NBEAL2Q6ZNJ1 2754 aa6.12□□□□□ -1.43
SEC16A-206ENST00000431893 CDH23Q9H251 3354 aa6.11□□□□□ -1.43
SEC16A-206ENST00000431893 VPS13AQ96RL7 3174 aa6.11□□□□□ -1.43
SEC16A-206ENST00000431893 CENPEQ02224 2701 aa6.1□□□□□ -1.43
SEC16A-206ENST00000431893 WDFY4Q6ZS81 3184 aa6.1□□□□□ -1.43
SEC16A-206ENST00000431893 PRUNE2Q8WUY3 3088 aa6.09□□□□□ -1.43
SEC16A-206ENST00000431893 SZT2Q5T011 3432 aa6.09□□□□□ -1.43
SEC16A-206ENST00000431893 TRANK1O15050 2925 aa6.08□□□□□ -1.44
SEC16A-206ENST00000431893 UNC79Q9P2D8 2635 aa6.08□□□□□ -1.44
SEC16A-206ENST00000431893 REV3LO60673 3130 aa6.08□□□□□ -1.44
SEC16A-206ENST00000431893 FRYQ5TBA9 3013 aa6.07□□□□□ -1.44
SEC16A-206ENST00000431893 COL6A3P12111 3177 aa6.05□□□□□ -1.44
SEC16A-206ENST00000431893 P0C880 135 aa6.05□□□□□ -1.44
SEC16A-206ENST00000431893 KRTAP21-3Q3LHN1 58 aa6.04□□□□□ -1.44
SEC16A-206ENST00000431893 STAB1Q9NY15 2570 aa6.04□□□□□ -1.44
SEC16A-206ENST00000431893 ZNF292O60281 2723 aa6.04□□□□□ -1.44
SEC16A-206ENST00000431893 XP32Q5T750 250 aa6.03□□□□□ -1.44
SEC16A-206ENST00000431893 KALRNO60229 2985 aa6.01□□□□□ -1.45
SEC16A-206ENST00000431893 STAB2Q8WWQ8 2551 aa6.01□□□□□ -1.45
SEC16A-206ENST00000431893 PP632Q6XCG6 107 aa6□□□□□ -1.45
SEC16A-206ENST00000431893 COL6A5A8TX70 2615 aa5.98□□□□□ -1.45
SEC16A-206ENST00000431893 TNRC18O15417 2968 aaPredicted RBP5.97□□□□□ -1.45
SEC16A-206ENST00000431893 SETXQ7Z333 2677 aaKnown RBP5.96□□□□□ -1.46
SEC16A-206ENST00000431893 CFAP47Q6ZTR5 3102 aa5.96□□□□□ -1.46
SEC16A-206ENST00000431893 KRTAP10-10P60014 251 aa5.95□□□□□ -1.46
SEC16A-206ENST00000431893 VCANP13611 3396 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms